RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 LRIF1Q5T3J3 769 aa9.18□□□□□ -0.94
SHMT2-224ENST00000556737 RNF220Q5VTB9 566 aa9.18□□□□□ -0.94
SHMT2-224ENST00000556737 DHDDSQ86SQ9 333 aa9.18□□□□□ -0.94
SHMT2-224ENST00000556737 VRK2Q86Y07 508 aa9.18□□□□□ -0.94
SHMT2-224ENST00000556737 DEFB107AQ8IZN7 70 aa9.18□□□□□ -0.94
SHMT2-224ENST00000556737 GABRG1Q8N1C3 465 aa9.18□□□□□ -0.94
SHMT2-224ENST00000556737 C10orf111Q8N326 155 aa9.18□□□□□ -0.94
SHMT2-224ENST00000556737 ZNF563Q8TA94 476 aa9.18□□□□□ -0.94
SHMT2-224ENST00000556737 TSPEARQ8WU66 669 aa9.18□□□□□ -0.94
SHMT2-224ENST00000556737 SLC25A43Q8WUT9 341 aaPredicted RBP9.18□□□□□ -0.94
SHMT2-224ENST00000556737 SLC38A5Q8WUX1 472 aa9.18□□□□□ -0.94
SHMT2-224ENST00000556737 PMM1Q92871 262 aa9.18□□□□□ -0.94
SHMT2-224ENST00000556737 TMEM19Q96HH6 336 aa9.18□□□□□ -0.94
SHMT2-224ENST00000556737 ARL5BQ96KC2 179 aa9.18□□□□□ -0.94
SHMT2-224ENST00000556737 RAB3IPQ96QF0 476 aaPredicted RBP9.18□□□□□ -0.94
SHMT2-224ENST00000556737 HS3ST6Q96QI5 342 aa9.18□□□□□ -0.94
SHMT2-224ENST00000556737 ZNF300Q96RE9 604 aaPredicted RBP9.18□□□□□ -0.94
SHMT2-224ENST00000556737 MED18Q9BUE0 208 aa9.18□□□□□ -0.94
SHMT2-224ENST00000556737 KLHL4Q9C0H6 718 aa9.18□□□□□ -0.94
SHMT2-224ENST00000556737 OR11A1Q9GZK7 315 aa9.18□□□□□ -0.94
SHMT2-224ENST00000556737 LRMDAQ9H2I8 198 aa9.18□□□□□ -0.94
SHMT2-224ENST00000556737 ADA2Q9NZK5 511 aa9.18□□□□□ -0.94
SHMT2-224ENST00000556737 ZNF443Q9Y2A4 671 aaPredicted RBP9.18□□□□□ -0.94
SHMT2-224ENST00000556737 CHST2Q9Y4C5 530 aa9.18□□□□□ -0.94
SHMT2-224ENST00000556737 ITPR3Q14573 2671 aa9.17□□□□□ -0.94
SHMT2-224ENST00000556737 ZNF716A6NP11 495 aa9.17□□□□□ -0.94
SHMT2-224ENST00000556737 ZNF814B7Z6K7 855 aa9.17□□□□□ -0.94
SHMT2-224ENST00000556737 H0YHG0 523 aa9.17□□□□□ -0.94
SHMT2-224ENST00000556737 DNAJC8O75937 253 aaPredicted RBP9.17□□□□□ -0.94
SHMT2-224ENST00000556737 PRKD3O94806 890 aa9.17□□□□□ -0.94
SHMT2-224ENST00000556737 CD53P19397 219 aa9.17□□□□□ -0.94
SHMT2-224ENST00000556737 PSMB1P20618 241 aaKnown RBP9.17□□□□□ -0.94
SHMT2-224ENST00000556737 IDH2P48735 452 aaKnown RBP9.17□□□□□ -0.94
SHMT2-224ENST00000556737 CRISP3P54108 245 aa9.17□□□□□ -0.94
SHMT2-224ENST00000556737 PSME3P61289 254 aa9.17□□□□□ -0.94
SHMT2-224ENST00000556737 CAPRIN1Q14444 709 aaKnown RBP9.17□□□□□ -0.94
SHMT2-224ENST00000556737 RGNQ15493 299 aa9.17□□□□□ -0.94
SHMT2-224ENST00000556737 TRMT5Q32P41 509 aaKnown RBP9.17□□□□□ -0.94
SHMT2-224ENST00000556737 LIN52Q52LA3 116 aa9.17□□□□□ -0.94
SHMT2-224ENST00000556737 COQ5Q5HYK3 327 aa9.17□□□□□ -0.94
SHMT2-224ENST00000556737 PAGE3Q5JUK9 113 aa9.17□□□□□ -0.94
SHMT2-224ENST00000556737 TMEM201Q5SNT2 666 aa9.17□□□□□ -0.94
SHMT2-224ENST00000556737 FBXW10Q5XX13 1052 aa9.17□□□□□ -0.94
SHMT2-224ENST00000556737 ANKRD34AQ69YU3 496 aa9.17□□□□□ -0.94
SHMT2-224ENST00000556737 GTF2IRD2BQ6EKJ0 949 aa9.17□□□□□ -0.94
SHMT2-224ENST00000556737 SEZ6L2Q6UXD5 910 aa9.17□□□□□ -0.94
SHMT2-224ENST00000556737 TMPPEQ6ZT21 453 aa9.17□□□□□ -0.94
SHMT2-224ENST00000556737 BEND4Q6ZU67 534 aa9.17□□□□□ -0.94
SHMT2-224ENST00000556737 GTF2IRD2Q86UP8 949 aa9.17□□□□□ -0.94
SHMT2-224ENST00000556737 RETREG3Q86VR2 466 aa9.17□□□□□ -0.94
SHMT2-224ENST00000556737 ADGRG3Q86Y34 549 aa9.17□□□□□ -0.94
SHMT2-224ENST00000556737 SLC43A2Q8N370 569 aa9.17□□□□□ -0.94
SHMT2-224ENST00000556737 OR52P1PQ8NH57 321 aa9.17□□□□□ -0.94
SHMT2-224ENST00000556737 SLC7A6OSQ96CW6 309 aaPredicted RBP9.17□□□□□ -0.94
SHMT2-224ENST00000556737 PIK3IP1Q96FE7 263 aa9.17□□□□□ -0.94
SHMT2-224ENST00000556737 ZC3HAV1LQ96H79 300 aaKnown RBP9.17□□□□□ -0.94
SHMT2-224ENST00000556737 REXO5Q96IC2 774 aaKnown RBP9.17□□□□□ -0.94
SHMT2-224ENST00000556737 ALPK1Q96QP1 1244 aa9.17□□□□□ -0.94
SHMT2-224ENST00000556737 TACO1Q9BSH4 297 aaKnown RBP9.17□□□□□ -0.94
SHMT2-224ENST00000556737 THTPAQ9BU02 230 aa9.17□□□□□ -0.94
SHMT2-224ENST00000556737 RSPO3Q9BXY4 272 aaPredicted RBP9.17□□□□□ -0.94
SHMT2-224ENST00000556737 ACTR6Q9GZN1 396 aa9.17□□□□□ -0.94
SHMT2-224ENST00000556737 IKZF5Q9H5V7 419 aa9.17□□□□□ -0.94
SHMT2-224ENST00000556737 MTHFD2LQ9H903 347 aaPredicted RBP9.17□□□□□ -0.94
SHMT2-224ENST00000556737 A4GALTQ9NPC4 353 aa9.17□□□□□ -0.94
SHMT2-224ENST00000556737 SERINC1Q9NRX5 453 aa9.17□□□□□ -0.94
SHMT2-224ENST00000556737 RLIMQ9NVW2 624 aa9.17□□□□□ -0.94
SHMT2-224ENST00000556737 ZNF226Q9NYT6 803 aa9.17□□□□□ -0.94
SHMT2-224ENST00000556737 TAS2R1Q9NYW7 299 aa9.17□□□□□ -0.94
SHMT2-224ENST00000556737 CALML5Q9NZT1 146 aa9.17□□□□□ -0.94
SHMT2-224ENST00000556737 SLAMF8Q9P0V8 285 aa9.17□□□□□ -0.94
SHMT2-224ENST00000556737 KLHL9Q9P2J3 617 aa9.17□□□□□ -0.94
SHMT2-224ENST00000556737 OSGIN1Q9UJX0 560 aa9.17□□□□□ -0.94
SHMT2-224ENST00000556737 GMEB1Q9Y692 573 aa9.17□□□□□ -0.94
SHMT2-224ENST00000556737 FREM1Q5H8C1 2179 aa9.16□□□□□ -0.94
SHMT2-224ENST00000556737 IGKV3D-15A0A087WSY6 115 aa9.16□□□□□ -0.94
SHMT2-224ENST00000556737 TMED7-TICAM2A0A0A6YYA0 188 aa9.16□□□□□ -0.94
SHMT2-224ENST00000556737 TMEM72A0PK05 275 aa9.16□□□□□ -0.94
SHMT2-224ENST00000556737 CFAP73A6NFT4 308 aa9.16□□□□□ -0.94
SHMT2-224ENST00000556737 ZNF724A8MTY0 619 aa9.16□□□□□ -0.94
SHMT2-224ENST00000556737 SULT2B1O00204 365 aa9.16□□□□□ -0.94
SHMT2-224ENST00000556737 CLIC1O00299 241 aa9.16□□□□□ -0.94
SHMT2-224ENST00000556737 CASKO14936 926 aa9.16□□□□□ -0.94
SHMT2-224ENST00000556737 KLF4O43474 513 aa9.16□□□□□ -0.94
SHMT2-224ENST00000556737 DNPH1O43598 174 aa9.16□□□□□ -0.94
SHMT2-224ENST00000556737 RAMP1O60894 148 aa9.16□□□□□ -0.94
SHMT2-224ENST00000556737 CIB2O75838 187 aa9.16□□□□□ -0.94
SHMT2-224ENST00000556737 PMS2P2O95744 297 aa9.16□□□□□ -0.94
SHMT2-224ENST00000556737 YES1P07947 543 aa9.16□□□□□ -0.94
SHMT2-224ENST00000556737 THBS1P07996 1170 aa9.16□□□□□ -0.94
SHMT2-224ENST00000556737 IMPDH2P12268 514 aa9.16□□□□□ -0.94
SHMT2-224ENST00000556737 PPP3CBP16298 524 aa9.16□□□□□ -0.94
SHMT2-224ENST00000556737 IL7RP16871 459 aa9.16□□□□□ -0.94
SHMT2-224ENST00000556737 DNASE1P24855 282 aa9.16□□□□□ -0.94
SHMT2-224ENST00000556737 TACR3P29371 465 aa9.16□□□□□ -0.94
SHMT2-224ENST00000556737 ACAA2P42765 397 aaKnown RBP9.16□□□□□ -0.94
SHMT2-224ENST00000556737 OR3A2P47893 321 aa9.16□□□□□ -0.94
SHMT2-224ENST00000556737 POLR2HP52434 150 aaKnown RBP9.16□□□□□ -0.94
SHMT2-224ENST00000556737 RASGEF1BQ0VAM2 473 aa9.16□□□□□ -0.94
SHMT2-224ENST00000556737 GNA13Q14344 377 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms