RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 OR1F2PQ96R84 312 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 DPYSL5Q9BPU6 564 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 NDC1Q9BTX1 674 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 MED18Q9BUE0 208 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 VN1R1Q9GZP7 353 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 SRRQ9GZT4 340 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 RNF32Q9H0A6 362 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 ZNF304Q9HCX3 659 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 KLHL1Q9NR64 748 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 TBC1D24Q9ULP9 559 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 GRIP1Q9Y3R0 1128 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 UGT2A1Q9Y4X1 527 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 RP1P56715 2156 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 TCRBV16S1A1N1A0A5B0 115 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 ISPDA4D126 451 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 FRG2CA6NGY1 282 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 SLC22A31A6NKX4 558 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 CASKO14936 926 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 POLR1CO15160 346 aaPredicted RBP9.26□□□□□ -0.93
TMEM260-211ENST00000556648 NDUFB2O95178 105 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 FOSL2P15408 326 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 RORAP35398 523 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 NAA10P41227 235 aaPredicted RBP9.26□□□□□ -0.93
TMEM260-211ENST00000556648 OR12D2P58182 307 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 ERVK-25P63136 954 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 RUNX1T1Q06455 604 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 CDC20Q12834 499 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 EBPQ15125 230 aaKnown RBP9.26□□□□□ -0.93
TMEM260-211ENST00000556648 CARTPTQ16568 116 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 BAK1Q16611 211 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 FAM27D1Q5T7N8 215 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 ARL9Q6T311 187 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 COX15Q7KZN9 410 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 GDPD3Q7L5L3 318 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 PRSS42Q7Z5A4 293 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 NR2C2APQ86WQ0 139 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 OR8H2Q8N162 312 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 C17orf47Q8NEP4 570 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 DNAJA4Q8WW22 397 aaPredicted RBP9.26□□□□□ -0.93
TMEM260-211ENST00000556648 LCORQ96JN0 433 aaPredicted RBP9.26□□□□□ -0.93
TMEM260-211ENST00000556648 PPIL3Q9H2H8 161 aaKnown RBP9.26□□□□□ -0.93
TMEM260-211ENST00000556648 SIAEQ9HAT2 523 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 TIGARQ9NQ88 270 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 UBQLN4Q9NRR5 601 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 SLC22A11Q9NSA0 550 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 BABAM2Q9NXR7 383 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 SERTAD3Q9UJW9 196 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 ZNF346Q9UL40 294 aaKnown RBP9.26□□□□□ -0.93
TMEM260-211ENST00000556648 BAIAP2Q9UQB8 552 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 MPDZO75970 2070 aa9.25□□□□□ -0.93
TMEM260-211ENST00000556648 IGHV3-20A0A0C4DH32 117 aa9.25□□□□□ -0.93
TMEM260-211ENST00000556648 A0A1B0GX78 115 aa9.25□□□□□ -0.93
TMEM260-211ENST00000556648 ELOA3DA6NLF2 546 aaPredicted RBP9.25□□□□□ -0.93
TMEM260-211ENST00000556648 TTC36A6NLP5 189 aa9.25□□□□□ -0.93
TMEM260-211ENST00000556648 J3QLW9 94 aa9.25□□□□□ -0.93
TMEM260-211ENST00000556648 SCDO00767 359 aa9.25□□□□□ -0.93
TMEM260-211ENST00000556648 SERPINI2O75830 405 aa9.25□□□□□ -0.93
TMEM260-211ENST00000556648 RGS9O75916 674 aaPredicted RBP9.25□□□□□ -0.93
TMEM260-211ENST00000556648 TIAF1O95411 115 aa9.25□□□□□ -0.93
TMEM260-211ENST00000556648 HPGDP15428 266 aa9.25□□□□□ -0.93
TMEM260-211ENST00000556648 ZNF19P17023 458 aa9.25□□□□□ -0.93
TMEM260-211ENST00000556648 RPL4P36578 427 aaKnown RBP9.25□□□□□ -0.93
TMEM260-211ENST00000556648 AQP2P41181 271 aa9.25□□□□□ -0.93
TMEM260-211ENST00000556648 DHPSP49366 369 aaPredicted RBP9.25□□□□□ -0.93
TMEM260-211ENST00000556648 NR0B1P51843 470 aaKnown RBP9.25□□□□□ -0.93
TMEM260-211ENST00000556648 COPZ1P61923 177 aa9.25□□□□□ -0.93
TMEM260-211ENST00000556648 LTBQ06643 244 aa9.25□□□□□ -0.93
TMEM260-211ENST00000556648 ELAVL1Q15717 326 aaKnown RBP9.25□□□□□ -0.93
TMEM260-211ENST00000556648 NSDHLQ15738 373 aa9.25□□□□□ -0.93
TMEM260-211ENST00000556648 ELOA3BQ3SY89 546 aa9.25□□□□□ -0.93
TMEM260-211ENST00000556648 WDR45BQ5MNZ6 344 aa9.25□□□□□ -0.93
TMEM260-211ENST00000556648 GUSBP11Q6P575 273 aa9.25□□□□□ -0.93
TMEM260-211ENST00000556648 ZNF574Q6ZN55 896 aaPredicted RBP9.25□□□□□ -0.93
TMEM260-211ENST00000556648 GPR135Q8IZ08 494 aa9.25□□□□□ -0.93
TMEM260-211ENST00000556648 CELF2-AS1Q8N7Q2 184 aa9.25□□□□□ -0.93
TMEM260-211ENST00000556648 ELOA3Q8NG57 546 aa9.25□□□□□ -0.93
TMEM260-211ENST00000556648 OR13C5Q8NGS8 318 aa9.25□□□□□ -0.93
TMEM260-211ENST00000556648 NMNAT3Q96T66 252 aa9.25□□□□□ -0.93
TMEM260-211ENST00000556648 ELF4Q99607 663 aaPredicted RBP9.25□□□□□ -0.93
TMEM260-211ENST00000556648 ATF6BQ99941 703 aa9.25□□□□□ -0.93
TMEM260-211ENST00000556648 ENAMQ9NRM1 1142 aa9.25□□□□□ -0.93
TMEM260-211ENST00000556648 FGF21Q9NSA1 209 aa9.25□□□□□ -0.93
TMEM260-211ENST00000556648 SACM1LQ9NTJ5 587 aa9.25□□□□□ -0.93
TMEM260-211ENST00000556648 ASB6Q9NWX5 421 aa9.25□□□□□ -0.93
TMEM260-211ENST00000556648 SEMA5BQ9P283 1151 aa9.25□□□□□ -0.93
TMEM260-211ENST00000556648 MKL2Q9ULH7 1088 aa9.25□□□□□ -0.93
TMEM260-211ENST00000556648 GSTK1Q9Y2Q3 226 aa9.25□□□□□ -0.93
TMEM260-211ENST00000556648 SIT1Q9Y3P8 196 aa9.25□□□□□ -0.93
TMEM260-211ENST00000556648 UNC13CQ8NB66 2214 aa9.24□□□□□ -0.93
TMEM260-211ENST00000556648 LY6G6EA0A0G2JKS1 128 aa9.24□□□□□ -0.93
TMEM260-211ENST00000556648 LINC00854A0A1B0GVQ3 168 aa9.24□□□□□ -0.93
TMEM260-211ENST00000556648 FAM171A2A8MVW0 826 aa9.24□□□□□ -0.93
TMEM260-211ENST00000556648 KHNYNO15037 678 aaKnown RBP9.24□□□□□ -0.93
TMEM260-211ENST00000556648 ZNF264O43296 627 aa9.24□□□□□ -0.93
TMEM260-211ENST00000556648 PDGFBP01127 241 aaPredicted RBP9.24□□□□□ -0.93
TMEM260-211ENST00000556648 IFNGP01579 166 aa9.24□□□□□ -0.93
TMEM260-211ENST00000556648 ZNF117Q03924 483 aa9.24□□□□□ -0.93
TMEM260-211ENST00000556648 EGR4Q05215 589 aa9.24□□□□□ -0.93
TMEM260-211ENST00000556648 SLC3A1Q07837 685 aa9.24□□□□□ -0.93
TMEM260-211ENST00000556648 TOMM34Q15785 309 aaPredicted RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms