RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 A0A1B0GWA3 101 aa16.05■□□□□ 0.16
PTPN21-208ENST00000556564 PIP5K1CO60331 668 aa16.05■□□□□ 0.16
PTPN21-208ENST00000556564 IGHV3-9P01782 118 aa16.05■□□□□ 0.16
PTPN21-208ENST00000556564 GPR139Q6DWJ6 353 aa16.05■□□□□ 0.16
PTPN21-208ENST00000556564 BPHLQ86WA6 291 aaPredicted RBP16.05■□□□□ 0.16
PTPN21-208ENST00000556564 GPR78Q96P69 363 aa16.05■□□□□ 0.16
PTPN21-208ENST00000556564 IER2Q9BTL4 223 aa16.05■□□□□ 0.16
PTPN21-208ENST00000556564 AGPAT4Q9NRZ5 378 aa16.05■□□□□ 0.16
PTPN21-208ENST00000556564 REV1Q9UBZ9 1251 aa16.05■□□□□ 0.16
PTPN21-208ENST00000556564 OR2W5A6NFC9 320 aa16.05■□□□□ 0.16
PTPN21-208ENST00000556564 NPR2P20594 1047 aa16.05■□□□□ 0.16
PTPN21-208ENST00000556564 TRHRP34981 398 aaPredicted RBP16.05■□□□□ 0.16
PTPN21-208ENST00000556564 TUBA3EQ6PEY2 450 aa16.05■□□□□ 0.16
PTPN21-208ENST00000556564 MEPCEQ7L2J0 689 aaKnown RBP16.05■□□□□ 0.16
PTPN21-208ENST00000556564 RETREG3Q86VR2 466 aa16.05■□□□□ 0.16
PTPN21-208ENST00000556564 ZPBPQ9BS86 351 aa16.05■□□□□ 0.16
PTPN21-208ENST00000556564 RGPD3A6NKT7 1758 aaPredicted RBP16.05■□□□□ 0.16
PTPN21-208ENST00000556564 RBBP9O75884 186 aa16.05■□□□□ 0.16
PTPN21-208ENST00000556564 EIF1P41567 113 aaKnown RBP16.05■□□□□ 0.16
PTPN21-208ENST00000556564 KMT5CQ86Y97 462 aa16.05■□□□□ 0.16
PTPN21-208ENST00000556564 PHOX2BQ99453 314 aa16.05■□□□□ 0.16
PTPN21-208ENST00000556564 DLGAP1O14490 977 aa16.05■□□□□ 0.16
PTPN21-208ENST00000556564 PVALBP20472 110 aaPredicted RBP16.05■□□□□ 0.16
PTPN21-208ENST00000556564 MECP2P51608 486 aaKnown RBP16.05■□□□□ 0.16
PTPN21-208ENST00000556564 GK3PQ14409 553 aa16.05■□□□□ 0.16
PTPN21-208ENST00000556564 ASRGL1Q7L266 308 aa16.05■□□□□ 0.16
PTPN21-208ENST00000556564 TMEM151AQ8N4L1 468 aa16.05■□□□□ 0.16
PTPN21-208ENST00000556564 RFT1Q96AA3 541 aa16.05■□□□□ 0.16
PTPN21-208ENST00000556564 TAMM41Q96BW9 452 aa16.05■□□□□ 0.16
PTPN21-208ENST00000556564 EPOPA6NHQ4 379 aa16.04■□□□□ 0.16
PTPN21-208ENST00000556564 TEX46H3BTG2 121 aa16.04■□□□□ 0.16
PTPN21-208ENST00000556564 STT3AP46977 705 aa16.04■□□□□ 0.16
PTPN21-208ENST00000556564 GABARAPL2P60520 117 aa16.04■□□□□ 0.16
PTPN21-208ENST00000556564 COL28A1Q2UY09 1125 aa16.04■□□□□ 0.16
PTPN21-208ENST00000556564 GOT1L1Q8NHS2 421 aaPredicted RBP16.04■□□□□ 0.16
PTPN21-208ENST00000556564 PAK1IP1Q9NWT1 392 aaPredicted RBP16.04■□□□□ 0.16
PTPN21-208ENST00000556564 STMND1H3BQB6 276 aa16.04■□□□□ 0.16
PTPN21-208ENST00000556564 GAB1Q13480 694 aa16.04■□□□□ 0.16
PTPN21-208ENST00000556564 NLRP8Q86W28 1048 aa16.04■□□□□ 0.16
PTPN21-208ENST00000556564 B3GNT7Q8NFL0 401 aa16.04■□□□□ 0.16
PTPN21-208ENST00000556564 MFSD8Q8NHS3 518 aa16.04■□□□□ 0.16
PTPN21-208ENST00000556564 TMEM163Q8TC26 289 aa16.04■□□□□ 0.16
PTPN21-208ENST00000556564 WDR90Q96KV7 1748 aa16.04■□□□□ 0.16
PTPN21-208ENST00000556564 TRIB1Q96RU8 372 aa16.04■□□□□ 0.16
PTPN21-208ENST00000556564 LILRA5A6NI73 299 aa16.04■□□□□ 0.16
PTPN21-208ENST00000556564 TIMM8AO60220 97 aaPredicted RBP16.04■□□□□ 0.16
PTPN21-208ENST00000556564 OR2J2O76002 312 aa16.04■□□□□ 0.16
PTPN21-208ENST00000556564 POU2F2P09086 479 aa16.04■□□□□ 0.16
PTPN21-208ENST00000556564 ZNF182P17025 639 aaPredicted RBP16.04■□□□□ 0.16
PTPN21-208ENST00000556564 CD97P48960 835 aa16.04■□□□□ 0.16
PTPN21-208ENST00000556564 CDK5R2Q13319 367 aa16.04■□□□□ 0.16
PTPN21-208ENST00000556564 CPT1CQ8TCG5 803 aa16.04■□□□□ 0.16
PTPN21-208ENST00000556564 TRUB1Q8WWH5 349 aaKnown RBP16.04■□□□□ 0.16
PTPN21-208ENST00000556564 UCN3Q969E3 161 aa16.04■□□□□ 0.16
PTPN21-208ENST00000556564 CENPBD1B2RD01 187 aa16.04■□□□□ 0.16
PTPN21-208ENST00000556564 KEAP1Q14145 624 aa16.04■□□□□ 0.16
PTPN21-208ENST00000556564 NKPD1Q17RQ9 610 aa16.04■□□□□ 0.16
PTPN21-208ENST00000556564 HYAL4Q2M3T9 481 aa16.04■□□□□ 0.16
PTPN21-208ENST00000556564 OR7E24Q6IFN5 339 aa16.04■□□□□ 0.16
PTPN21-208ENST00000556564 FAM199XQ6PEV8 388 aaPredicted RBP16.04■□□□□ 0.16
PTPN21-208ENST00000556564 STACQ99469 402 aa16.04■□□□□ 0.16
PTPN21-208ENST00000556564 OR6C76A6NM76 312 aa16.04■□□□□ 0.16
PTPN21-208ENST00000556564 DOK2O60496 412 aa16.04■□□□□ 0.16
PTPN21-208ENST00000556564 DBHP09172 617 aa16.04■□□□□ 0.16
PTPN21-208ENST00000556564 ART1P52961 327 aa16.04■□□□□ 0.16
PTPN21-208ENST00000556564 ALG14Q96F25 216 aa16.04■□□□□ 0.16
PTPN21-208ENST00000556564 SLC22A7Q9Y694 548 aa16.04■□□□□ 0.16
PTPN21-208ENST00000556564 MYO7AQ13402 2215 aa16.03■□□□□ 0.16
PTPN21-208ENST00000556564 GABRA2P47869 451 aa16.03■□□□□ 0.16
PTPN21-208ENST00000556564 MBOAT2Q6ZWT7 520 aa16.03■□□□□ 0.16
PTPN21-208ENST00000556564 KIAA1958Q8N8K9 716 aa16.03■□□□□ 0.16
PTPN21-208ENST00000556564 INO80EQ8NBZ0 244 aaPredicted RBP16.03■□□□□ 0.16
PTPN21-208ENST00000556564 IP6K3Q96PC2 410 aa16.03■□□□□ 0.16
PTPN21-208ENST00000556564 SLC29A1Q99808 456 aa16.03■□□□□ 0.16
PTPN21-208ENST00000556564 OR10A4Q9H209 315 aa16.03■□□□□ 0.16
PTPN21-208ENST00000556564 UCKL1Q9NWZ5 548 aa16.03■□□□□ 0.16
PTPN21-208ENST00000556564 OR2AT4A6NND4 320 aa16.03■□□□□ 0.16
PTPN21-208ENST00000556564 ZNF587BE7ETH6 402 aa16.03■□□□□ 0.16
PTPN21-208ENST00000556564 PEX14O75381 377 aa16.03■□□□□ 0.16
PTPN21-208ENST00000556564 GDF7Q7Z4P5 450 aa16.03■□□□□ 0.16
PTPN21-208ENST00000556564 MS4A15Q8N5U1 240 aa16.03■□□□□ 0.16
PTPN21-208ENST00000556564 OR7G2Q8NG99 324 aa16.03■□□□□ 0.16
PTPN21-208ENST00000556564 WNT4P56705 351 aa16.03■□□□□ 0.16
PTPN21-208ENST00000556564 SLC26A5P58743 744 aa16.03■□□□□ 0.16
PTPN21-208ENST00000556564 ZNF322Q6U7Q0 402 aaPredicted RBP16.03■□□□□ 0.16
PTPN21-208ENST00000556564 GPR160Q9UJ42 338 aa16.03■□□□□ 0.16
PTPN21-208ENST00000556564 TSPAN11A1L157 253 aa16.03■□□□□ 0.16
PTPN21-208ENST00000556564 ZNF593O00488 134 aaPredicted RBP16.03■□□□□ 0.16
PTPN21-208ENST00000556564 FOXD2O60548 495 aaPredicted RBP16.03■□□□□ 0.16
PTPN21-208ENST00000556564 AKR7A3O95154 331 aa16.03■□□□□ 0.16
PTPN21-208ENST00000556564 GABRR1P24046 479 aa16.03■□□□□ 0.16
PTPN21-208ENST00000556564 LANCL3Q6ZV70 420 aa16.03■□□□□ 0.16
PTPN21-208ENST00000556564 OR2A1Q8NGT9 310 aa16.03■□□□□ 0.16
PTPN21-208ENST00000556564 ELOVL3Q9HB03 270 aa16.03■□□□□ 0.16
PTPN21-208ENST00000556564 ANXA3P12429 323 aa16.02■□□□□ 0.16
PTPN21-208ENST00000556564 ZNF12P17014 697 aa16.02■□□□□ 0.16
PTPN21-208ENST00000556564 PRKAR1BP31321 381 aa16.02■□□□□ 0.16
PTPN21-208ENST00000556564 DRD3P35462 400 aa16.02■□□□□ 0.16
PTPN21-208ENST00000556564 ZNF683Q8IZ20 524 aa16.02■□□□□ 0.16
PTPN21-208ENST00000556564 MARVELD2Q8N4S9 558 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms