RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 TTC23Q5W5X9 447 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 HIST2H2AA3Q6FI13 130 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 LPCAT3Q6P1A2 487 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 ZNF773Q6PK81 442 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 C17orf64Q86WR6 236 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 OR10A7Q8NGE5 316 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 PPCDCQ96CD2 204 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 TM4SF18Q96CE8 201 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 MRGPRX4Q96LA9 322 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 BEX2Q9BXY8 128 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 TMEM38AQ9H6F2 299 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 CXorf36Q9H7Y0 433 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 PELI2Q9HAT8 420 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 TAS2R9Q9NYW1 312 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 MTCH1Q9NZJ7 389 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 DKKL1Q9UK85 242 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 MKLN1Q9UL63 735 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 STUB1Q9UNE7 303 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 LIPT1Q9Y234 373 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 A0A1W2PPC1 479 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 SLC22A31A6NKX4 558 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 VSTM2BA6NLU5 285 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 SERPINE3A8MV23 424 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 CYR61O00622 381 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 PRICKLE3O43900 615 aaPredicted RBP4.72□□□□□ -1.65
TMEM260-210ENST00000556422 OR2B3O76000 313 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 SLC22A5O76082 557 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 IFNA21P01568 189 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 SLC35G4P0C7Q5 338 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 LINC00614P0C842 121 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 FPR1P21462 350 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 PPIBP23284 216 aaKnown RBP4.72□□□□□ -1.65
TMEM260-210ENST00000556422 APEX1P27695 318 aaKnown RBP4.72□□□□□ -1.65
TMEM260-210ENST00000556422 DCKP27707 260 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 PEBP1P30086 187 aaKnown RBP4.72□□□□□ -1.65
TMEM260-210ENST00000556422 TGM4P49221 684 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 CSNK1G2P78368 415 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 BLOC1S1P78537 153 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 PIGFQ07326 219 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 HYAL2Q12891 473 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 ACSM5Q6NUN0 579 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 FAHD2BQ6P2I3 314 aaPredicted RBP4.72□□□□□ -1.65
TMEM260-210ENST00000556422 FAHD1Q6P587 224 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 RNF130Q86XS8 419 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 NRROSQ86YC3 692 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 YAF2Q8IY57 180 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 DEFB123Q8N688 67 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 OR13F1Q8NGS4 319 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 PSMA8Q8TAA3 256 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 CNIH3Q8TBE1 160 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 APOBEC4Q8WW27 367 aaKnown RBP4.72□□□□□ -1.65
TMEM260-210ENST00000556422 EXTL1Q92935 676 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 FAHD2AQ96GK7 314 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 C12orf66Q96MD2 445 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 TAAR9Q96RI9 348 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 PHB2Q99623 299 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 RHNO1Q9BSD3 238 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 DOHHQ9BU89 302 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 TRMT61BQ9BVS5 477 aaKnown RBP4.72□□□□□ -1.65
TMEM260-210ENST00000556422 CACNG6Q9BXT2 260 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 POLR1BQ9H9Y6 1135 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 FGF22Q9HCT0 170 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 SIRT3Q9NTG7 399 aaPredicted RBP4.72□□□□□ -1.65
TMEM260-210ENST00000556422 TEX10Q9NXF1 929 aaPredicted RBP4.72□□□□□ -1.65
TMEM260-210ENST00000556422 FBXL12Q9NXK8 326 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 CORINQ9Y5Q5 1042 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 SNX11Q9Y5W9 270 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 TDRD6O60522 2096 aaKnown RBP4.72□□□□□ -1.65
TMEM260-210ENST00000556422 A0A1W2PQU0 124 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 A0A1W2PRB8 838 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 H3BMQ9 156 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 M0QZK8 103 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 ZNF701M0R085 212 aaPredicted RBP4.72□□□□□ -1.65
TMEM260-210ENST00000556422 SLC1A7O00341 560 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 PHYHO14832 338 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 SIGLEC6O43699 453 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 SSNA1O43805 119 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 SDC3O75056 442 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 ZNF780AO75290 641 aaPredicted RBP4.72□□□□□ -1.65
TMEM260-210ENST00000556422 EML2O95834 649 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 IFNGR1P15260 489 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 PCMT1P22061 227 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 CD6P30203 668 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 PCBP4P57723 403 aaKnown RBP4.72□□□□□ -1.65
TMEM260-210ENST00000556422 RPS21P63220 83 aaKnown RBP4.72□□□□□ -1.65
TMEM260-210ENST00000556422 NHLH2Q02577 135 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 EGR3Q06889 387 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 TPRG1LQ5T0D9 272 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 ZNF776Q68DI1 518 aaPredicted RBP4.72□□□□□ -1.65
TMEM260-210ENST00000556422 ZNF793Q6ZN11 406 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 SETD6Q8TBK2 473 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 TCTEX1D2Q8WW35 142 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 SMPDL3AQ92484 453 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 UBE2E3Q969T4 207 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 GTPBP3Q969Y2 492 aaKnown RBP4.72□□□□□ -1.65
TMEM260-210ENST00000556422 SCARF2Q96GP6 870 aaPredicted RBP4.72□□□□□ -1.65
TMEM260-210ENST00000556422 OR14A2Q96R54 314 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 TIMM29Q9BSF4 260 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 SUCNR1Q9BXA5 334 aa4.72□□□□□ -1.65
TMEM260-210ENST00000556422 SLC17A9Q9BYT1 436 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms