RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 TNFRSF17Q02223 184 aa13.96□□□□□ -0.17
ARHGEF40-207ENST00000556399 ARHGAP40Q5TG30 622 aa13.96□□□□□ -0.17
ARHGEF40-207ENST00000556399 PRAMEF8Q5VWM4 474 aa13.96□□□□□ -0.17
ARHGEF40-207ENST00000556399 PRAMEF7Q5VXH5 474 aa13.96□□□□□ -0.17
ARHGEF40-207ENST00000556399 MFSD12Q6NUT3 480 aa13.96□□□□□ -0.17
ARHGEF40-207ENST00000556399 ZNF208O43345 1280 aa13.96□□□□□ -0.18
ARHGEF40-207ENST00000556399 RDH16O75452 317 aa13.96□□□□□ -0.18
ARHGEF40-207ENST00000556399 LALBAP00709 142 aa13.96□□□□□ -0.18
ARHGEF40-207ENST00000556399 P2RY2P41231 377 aa13.96□□□□□ -0.18
ARHGEF40-207ENST00000556399 ARHGDIBP52566 201 aa13.96□□□□□ -0.18
ARHGEF40-207ENST00000556399 Q6ZNB5 142 aa13.96□□□□□ -0.18
ARHGEF40-207ENST00000556399 ZNF546Q86UE3 836 aa13.96□□□□□ -0.18
ARHGEF40-207ENST00000556399 PHB2Q99623 299 aa13.96□□□□□ -0.18
ARHGEF40-207ENST00000556399 TIMM29Q9BSF4 260 aa13.96□□□□□ -0.18
ARHGEF40-207ENST00000556399 PLA2G12AQ9BZM1 189 aa13.96□□□□□ -0.18
ARHGEF40-207ENST00000556399 CHMP1AQ9HD42 196 aaPredicted RBP13.96□□□□□ -0.18
ARHGEF40-207ENST00000556399 ZNF337Q9Y3M9 751 aa13.96□□□□□ -0.18
ARHGEF40-207ENST00000556399 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.95□□□□□ -0.18
ARHGEF40-207ENST00000556399 SGK494L7N484 410 aa13.95□□□□□ -0.18
ARHGEF40-207ENST00000556399 RGS13O14921 159 aa13.95□□□□□ -0.18
ARHGEF40-207ENST00000556399 PROS1P07225 676 aa13.95□□□□□ -0.18
ARHGEF40-207ENST00000556399 LIPCP11150 499 aa13.95□□□□□ -0.18
ARHGEF40-207ENST00000556399 BSGP35613 385 aa13.95□□□□□ -0.18
ARHGEF40-207ENST00000556399 RBMXP38159 391 aaKnown RBP13.95□□□□□ -0.18
ARHGEF40-207ENST00000556399 GZMMP51124 257 aa13.95□□□□□ -0.18
ARHGEF40-207ENST00000556399 HMGA2P52926 109 aa13.95□□□□□ -0.18
ARHGEF40-207ENST00000556399 OR10A3P58181 314 aa13.95□□□□□ -0.18
ARHGEF40-207ENST00000556399 CCSAPQ6IQ19 270 aaPredicted RBP13.95□□□□□ -0.18
ARHGEF40-207ENST00000556399 FAM122CQ6P4D5 195 aa13.95□□□□□ -0.18
ARHGEF40-207ENST00000556399 CFAP77Q6ZQR2 320 aa13.95□□□□□ -0.18
ARHGEF40-207ENST00000556399 PLA2G15Q8NCC3 412 aa13.95□□□□□ -0.18
ARHGEF40-207ENST00000556399 DUSP19Q8WTR2 217 aa13.95□□□□□ -0.18
ARHGEF40-207ENST00000556399 SERINC1Q9NRX5 453 aa13.95□□□□□ -0.18
ARHGEF40-207ENST00000556399 HRO43593 1189 aa13.95□□□□□ -0.18
ARHGEF40-207ENST00000556399 SBK2P0C263 348 aa13.95□□□□□ -0.18
ARHGEF40-207ENST00000556399 ACTR10Q9NZ32 417 aa13.95□□□□□ -0.18
ARHGEF40-207ENST00000556399 GAPDHSO14556 408 aaPredicted RBP13.95□□□□□ -0.18
ARHGEF40-207ENST00000556399 SRPX2O60687 465 aaPredicted RBP13.95□□□□□ -0.18
ARHGEF40-207ENST00000556399 KIAA1024LP59773 190 aa13.95□□□□□ -0.18
ARHGEF40-207ENST00000556399 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.95□□□□□ -0.184e-7■□□□□ 10.1
ARHGEF40-207ENST00000556399 TMEFF1Q8IYR6 380 aa13.95□□□□□ -0.18
ARHGEF40-207ENST00000556399 STARD5Q9NSY2 213 aa13.95□□□□□ -0.18
ARHGEF40-207ENST00000556399 DNMT3BQ9UBC3 853 aaKnown RBP13.95□□□□□ -0.18
ARHGEF40-207ENST00000556399 GPN3Q9UHW5 284 aaPredicted RBP13.95□□□□□ -0.18
ARHGEF40-207ENST00000556399 COL11A1P12107 1806 aaPredicted RBP13.95□□□□□ -0.18
ARHGEF40-207ENST00000556399 ARID2Q68CP9 1835 aa13.95□□□□□ -0.18
ARHGEF40-207ENST00000556399 VNN2O95498 520 aa13.95□□□□□ -0.18
ARHGEF40-207ENST00000556399 GPR75O95800 540 aa13.95□□□□□ -0.18
ARHGEF40-207ENST00000556399 IL32P24001 234 aa13.95□□□□□ -0.18
ARHGEF40-207ENST00000556399 KIR2DS3Q14952 304 aa13.95□□□□□ -0.18
ARHGEF40-207ENST00000556399 RPE65Q16518 533 aa13.95□□□□□ -0.18
ARHGEF40-207ENST00000556399 CST9Q5W186 159 aa13.95□□□□□ -0.18
ARHGEF40-207ENST00000556399 TSSK4Q6SA08 328 aa13.95□□□□□ -0.18
ARHGEF40-207ENST00000556399 C12orf40Q86WS4 652 aa13.95□□□□□ -0.18
ARHGEF40-207ENST00000556399 CCDC71Q8IV32 467 aaPredicted RBP13.95□□□□□ -0.18
ARHGEF40-207ENST00000556399 FBXL2Q9UKC9 423 aa13.95□□□□□ -0.18
ARHGEF40-207ENST00000556399 A4GNTQ9UNA3 340 aa13.95□□□□□ -0.18
ARHGEF40-207ENST00000556399 IGLV3-16A0A075B6K0 115 aa13.94□□□□□ -0.18
ARHGEF40-207ENST00000556399 SURF4O15260 269 aa13.94□□□□□ -0.18
ARHGEF40-207ENST00000556399 KLF8O95600 359 aaPredicted RBP13.94□□□□□ -0.18
ARHGEF40-207ENST00000556399 PNMTP11086 282 aa13.94□□□□□ -0.18
ARHGEF40-207ENST00000556399 C1orf61Q13536 156 aa13.94□□□□□ -0.18
ARHGEF40-207ENST00000556399 KANSL1Q7Z3B3 1105 aa13.94□□□□□ -0.18
ARHGEF40-207ENST00000556399 ZNF761Q86XN6 746 aaPredicted RBP13.94□□□□□ -0.18
ARHGEF40-207ENST00000556399 PLPP6Q8IY26 295 aa13.94□□□□□ -0.18
ARHGEF40-207ENST00000556399 ZNF454Q8N9F8 522 aa13.94□□□□□ -0.18
ARHGEF40-207ENST00000556399 INTS14Q96SY0 518 aa13.94□□□□□ -0.18
ARHGEF40-207ENST00000556399 NMNAT3Q96T66 252 aa13.94□□□□□ -0.18
ARHGEF40-207ENST00000556399 LIN7BQ9HAP6 207 aa13.94□□□□□ -0.18
ARHGEF40-207ENST00000556399 BCL2L10Q9HD36 194 aa13.94□□□□□ -0.18
ARHGEF40-207ENST00000556399 A0A1W2PR48 441 aa13.94□□□□□ -0.18
ARHGEF40-207ENST00000556399 SERTM1A2A2V5 107 aa13.94□□□□□ -0.18
ARHGEF40-207ENST00000556399 SCO1O75880 301 aa13.94□□□□□ -0.18
ARHGEF40-207ENST00000556399 ZNF35P13682 527 aa13.94□□□□□ -0.18
ARHGEF40-207ENST00000556399 ENDOUP21128 410 aaKnown RBP13.94□□□□□ -0.18
ARHGEF40-207ENST00000556399 S100A11P31949 105 aa13.94□□□□□ -0.18
ARHGEF40-207ENST00000556399 ZNF542PQ5EBM4 170 aa13.94□□□□□ -0.18
ARHGEF40-207ENST00000556399 MAMDC2Q7Z304 686 aaPredicted RBP13.94□□□□□ -0.18
ARHGEF40-207ENST00000556399 CPNE2Q96FN4 548 aaPredicted RBP13.94□□□□□ -0.18
ARHGEF40-207ENST00000556399 PDCD1LG2Q9BQ51 273 aa13.94□□□□□ -0.18
ARHGEF40-207ENST00000556399 ISG20L2Q9H9L3 353 aaKnown RBP13.94□□□□□ -0.18
ARHGEF40-207ENST00000556399 SDHAF3Q9NRP4 125 aa13.94□□□□□ -0.18
ARHGEF40-207ENST00000556399 EDARQ9UNE0 448 aa13.94□□□□□ -0.18
ARHGEF40-207ENST00000556399 SLC6A5Q9Y345 797 aa13.94□□□□□ -0.18
ARHGEF40-207ENST00000556399 LTBP4Q8N2S1 1624 aa13.94□□□□□ -0.18
ARHGEF40-207ENST00000556399 hCG_1807616A0A1W2PRN6 198 aa13.94□□□□□ -0.18
ARHGEF40-207ENST00000556399 CD160O95971 181 aa13.94□□□□□ -0.18
ARHGEF40-207ENST00000556399 DBPQ10586 325 aaPredicted RBP13.94□□□□□ -0.18
ARHGEF40-207ENST00000556399 CCINQ13939 588 aa13.94□□□□□ -0.18
ARHGEF40-207ENST00000556399 NIPAL3Q6P499 406 aa13.94□□□□□ -0.18
ARHGEF40-207ENST00000556399 ZSCAN1Q8NBB4 408 aa13.94□□□□□ -0.18
ARHGEF40-207ENST00000556399 SFXN2Q96NB2 322 aa13.94□□□□□ -0.18
ARHGEF40-207ENST00000556399 OR51B4Q9Y5P0 310 aa13.94□□□□□ -0.18
ARHGEF40-207ENST00000556399 A0A1B0GWA3 101 aa13.94□□□□□ -0.18
ARHGEF40-207ENST00000556399 TMEM72A0PK05 275 aa13.94□□□□□ -0.18
ARHGEF40-207ENST00000556399 MEGF11A6BM72 1044 aa13.94□□□□□ -0.18
ARHGEF40-207ENST00000556399 YY2O15391 372 aa13.94□□□□□ -0.18
ARHGEF40-207ENST00000556399 PGCP20142 388 aa13.94□□□□□ -0.18
ARHGEF40-207ENST00000556399 RORAP35398 523 aa13.94□□□□□ -0.18
ARHGEF40-207ENST00000556399 EPHA5P54756 1037 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms