RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 RUNX2Q13950 521 aa15.74■□□□□ 0.11
PPP4R3A-208ENST00000555462 ATXN7L3Q14CW9 347 aaPredicted RBP15.74■□□□□ 0.11
PPP4R3A-208ENST00000555462 C2orf68Q2NKX9 166 aa15.74■□□□□ 0.11
PPP4R3A-208ENST00000555462 TUSC1Q2TAM9 212 aa15.74■□□□□ 0.11
PPP4R3A-208ENST00000555462 CNKSR3Q6P9H4 555 aa15.74■□□□□ 0.11
PPP4R3A-208ENST00000555462 CDK20Q8IZL9 346 aa15.74■□□□□ 0.11
PPP4R3A-208ENST00000555462 PELI1Q96FA3 418 aa15.74■□□□□ 0.11
PPP4R3A-208ENST00000555462 C1QTNF7Q9BXJ2 289 aa15.74■□□□□ 0.11
PPP4R3A-208ENST00000555462 CD93Q9NPY3 652 aa15.74■□□□□ 0.11
PPP4R3A-208ENST00000555462 CABIN1Q9Y6J0 2220 aa15.74■□□□□ 0.11
PPP4R3A-208ENST00000555462 VEGFDO43915 354 aa15.73■□□□□ 0.11
PPP4R3A-208ENST00000555462 SPDEFO95238 335 aa15.73■□□□□ 0.11
PPP4R3A-208ENST00000555462 RPN2P04844 631 aa15.73■□□□□ 0.11
PPP4R3A-208ENST00000555462 ERVK-25P63136 954 aa15.73■□□□□ 0.11
PPP4R3A-208ENST00000555462 ANKRD33Q7Z3H0 272 aa15.73■□□□□ 0.11
PPP4R3A-208ENST00000555462 STPG2Q8N412 459 aa15.73■□□□□ 0.11
PPP4R3A-208ENST00000555462 IL17RCQ8NAC3 791 aa15.73■□□□□ 0.11
PPP4R3A-208ENST00000555462 OR5M1Q8NGP8 315 aa15.73■□□□□ 0.11
PPP4R3A-208ENST00000555462 FAM174AQ8TBP5 190 aa15.73■□□□□ 0.11
PPP4R3A-208ENST00000555462 ZNF296Q8WUU4 475 aaPredicted RBP15.73■□□□□ 0.11
PPP4R3A-208ENST00000555462 ZNF436Q9C0F3 470 aaPredicted RBP15.73■□□□□ 0.11
PPP4R3A-208ENST00000555462 SRA1Q9HD15 236 aaKnown RBP15.73■□□□□ 0.11
PPP4R3A-208ENST00000555462 TMEM138Q9NPI0 162 aa15.73■□□□□ 0.11
PPP4R3A-208ENST00000555462 RPS6KB2Q9UBS0 482 aa15.73■□□□□ 0.11
PPP4R3A-208ENST00000555462 CES1P1Q9UKY3 287 aa15.73■□□□□ 0.11
PPP4R3A-208ENST00000555462 RPS10-NUDT3A0A1W2PQS6 291 aa15.73■□□□□ 0.11
PPP4R3A-208ENST00000555462 HRKO00198 91 aa15.73■□□□□ 0.11
PPP4R3A-208ENST00000555462 CT62P0C5K7 136 aa15.73■□□□□ 0.11
PPP4R3A-208ENST00000555462 VASPP50552 380 aaPredicted RBP15.73■□□□□ 0.11
PPP4R3A-208ENST00000555462 SHC2P98077 582 aa15.73■□□□□ 0.11
PPP4R3A-208ENST00000555462 ANGPT1Q15389 498 aa15.73■□□□□ 0.11
PPP4R3A-208ENST00000555462 SLC39A5Q6ZMH5 540 aa15.73■□□□□ 0.11
PPP4R3A-208ENST00000555462 OR11G2Q8NGC1 345 aa15.73■□□□□ 0.11
PPP4R3A-208ENST00000555462 ANGPTL6Q8NI99 470 aa15.73■□□□□ 0.11
PPP4R3A-208ENST00000555462 HSPA12BQ96MM6 686 aa15.73■□□□□ 0.11
PPP4R3A-208ENST00000555462 ZNF681Q96N22 645 aa15.73■□□□□ 0.11
PPP4R3A-208ENST00000555462 TRAF4Q9BUZ4 470 aaPredicted RBP15.73■□□□□ 0.11
PPP4R3A-208ENST00000555462 CXCL10P02778 98 aa15.73■□□□□ 0.11
PPP4R3A-208ENST00000555462 CXCL2P19875 107 aa15.73■□□□□ 0.11
PPP4R3A-208ENST00000555462 CENPAP49450 140 aa15.73■□□□□ 0.11
PPP4R3A-208ENST00000555462 GUCA2AQ02747 115 aa15.73■□□□□ 0.11
PPP4R3A-208ENST00000555462 LINC00303Q3SY05 128 aa15.73■□□□□ 0.11
PPP4R3A-208ENST00000555462 FAM74A1Q5RGS3 127 aa15.73■□□□□ 0.11
PPP4R3A-208ENST00000555462 HEPHL1Q6MZM0 1159 aa15.73■□□□□ 0.11
PPP4R3A-208ENST00000555462 PARGQ86W56 976 aa15.73■□□□□ 0.11
PPP4R3A-208ENST00000555462 LRRC25Q8N386 305 aaPredicted RBP15.73■□□□□ 0.11
PPP4R3A-208ENST00000555462 SRFBP1Q8NEF9 429 aaKnown RBP15.73■□□□□ 0.11
PPP4R3A-208ENST00000555462 CAPNS2Q96L46 248 aa15.73■□□□□ 0.11
PPP4R3A-208ENST00000555462 SORCS2Q96PQ0 1159 aa15.73■□□□□ 0.11
PPP4R3A-208ENST00000555462 EPHX3Q9H6B9 360 aa15.73■□□□□ 0.11
PPP4R3A-208ENST00000555462 PRSS16Q9NQE7 514 aa15.73■□□□□ 0.11
PPP4R3A-208ENST00000555462 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.73■□□□□ 0.11
PPP4R3A-208ENST00000555462 NUBP2Q9Y5Y2 271 aa15.73■□□□□ 0.11
PPP4R3A-208ENST00000555462 RP1P56715 2156 aa15.72■□□□□ 0.11
PPP4R3A-208ENST00000555462 TBC1D3DA0A087WVF3 549 aa15.72■□□□□ 0.11
PPP4R3A-208ENST00000555462 TBC1D3IA0A087WXS9 549 aa15.72■□□□□ 0.11
PPP4R3A-208ENST00000555462 TBC1D3EA0A087X179 549 aa15.72■□□□□ 0.11
PPP4R3A-208ENST00000555462 TBC1D3KA0A087X1G2 549 aa15.72■□□□□ 0.11
PPP4R3A-208ENST00000555462 TRAPPC13A5PLN9 417 aa15.72■□□□□ 0.11
PPP4R3A-208ENST00000555462 TBC1D3FA6NER0 549 aaPredicted RBP15.72■□□□□ 0.11
PPP4R3A-208ENST00000555462 TBC1D3LB9A6J9 549 aa15.72■□□□□ 0.11
PPP4R3A-208ENST00000555462 L7N2F9 121 aa15.72■□□□□ 0.11
PPP4R3A-208ENST00000555462 TBC1D3HP0C7X1 549 aa15.72■□□□□ 0.11
PPP4R3A-208ENST00000555462 OR8G3PP0DMU2 310 aa15.72■□□□□ 0.11
PPP4R3A-208ENST00000555462 NDUFS1P28331 727 aa15.72■□□□□ 0.11
PPP4R3A-208ENST00000555462 EMDP50402 254 aa15.72■□□□□ 0.11
PPP4R3A-208ENST00000555462 PSMA6P60900 246 aaKnown RBP15.72■□□□□ 0.11
PPP4R3A-208ENST00000555462 OPCMLQ14982 345 aa15.72■□□□□ 0.11
PPP4R3A-208ENST00000555462 GARNL3Q5VVW2 1013 aa15.72■□□□□ 0.11
PPP4R3A-208ENST00000555462 TBC1D3GQ6DHY5 549 aa15.72■□□□□ 0.11
PPP4R3A-208ENST00000555462 TBC1D3CQ6IPX1 549 aa15.72■□□□□ 0.11
PPP4R3A-208ENST00000555462 C11orf88Q6PI97 169 aa15.72■□□□□ 0.11
PPP4R3A-208ENST00000555462 RANBP3LQ86VV4 465 aaPredicted RBP15.72■□□□□ 0.11
PPP4R3A-208ENST00000555462 LIX1LQ8IVB5 337 aa15.72■□□□□ 0.11
PPP4R3A-208ENST00000555462 TBC1D3Q8IZP1 549 aaPredicted RBP15.72■□□□□ 0.11
PPP4R3A-208ENST00000555462 LINC00471Q8N535 108 aa15.72■□□□□ 0.11
PPP4R3A-208ENST00000555462 OR4D10Q8NGI6 311 aa15.72■□□□□ 0.11
PPP4R3A-208ENST00000555462 LIN7BQ9HAP6 207 aa15.72■□□□□ 0.11
PPP4R3A-208ENST00000555462 MED31Q9Y3C7 131 aa15.72■□□□□ 0.11
PPP4R3A-208ENST00000555462 OR6C74A6NCV1 312 aa15.72■□□□□ 0.11
PPP4R3A-208ENST00000555462 MCIDASD6RGH6 385 aa15.72■□□□□ 0.11
PPP4R3A-208ENST00000555462 KCNAB3O43448 404 aa15.72■□□□□ 0.11
PPP4R3A-208ENST00000555462 IFNA7P01567 189 aa15.72■□□□□ 0.11
PPP4R3A-208ENST00000555462 ACSM4P0C7M7 580 aa15.72■□□□□ 0.11
PPP4R3A-208ENST00000555462 GPR139Q6DWJ6 353 aa15.72■□□□□ 0.11
PPP4R3A-208ENST00000555462 RAB42Q8N4Z0 105 aa15.72■□□□□ 0.11
PPP4R3A-208ENST00000555462 MTHFD2LQ9H903 347 aaPredicted RBP15.72■□□□□ 0.11
PPP4R3A-208ENST00000555462 TRPV4Q9HBA0 871 aa15.72■□□□□ 0.11
PPP4R3A-208ENST00000555462 HRASLSQ9HDD0 168 aa15.72■□□□□ 0.11
PPP4R3A-208ENST00000555462 TBC1D29Q9UFV1 150 aa15.72■□□□□ 0.11
PPP4R3A-208ENST00000555462 FBXL2Q9UKC9 423 aa15.72■□□□□ 0.11
PPP4R3A-208ENST00000555462 FKBP7Q9Y680 259 aa15.72■□□□□ 0.11
PPP4R3A-208ENST00000555462 OBSL1O75147 1896 aa15.72■□□□□ 0.11
PPP4R3A-208ENST00000555462 TSPAN11A1L157 253 aa15.72■□□□□ 0.11
PPP4R3A-208ENST00000555462 CTSVO60911 334 aa15.72■□□□□ 0.11
PPP4R3A-208ENST00000555462 DRD3P35462 400 aa15.72■□□□□ 0.11
PPP4R3A-208ENST00000555462 MAZP56270 477 aaKnown RBP15.72■□□□□ 0.11
PPP4R3A-208ENST00000555462 HTR4Q13639 388 aa15.72■□□□□ 0.11
PPP4R3A-208ENST00000555462 FAM53BQ14153 422 aa15.72■□□□□ 0.11
PPP4R3A-208ENST00000555462 HSD17B12Q53GQ0 312 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms