RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 ENO4A6NNW6 628 aa9.73□□□□□ -0.85
TDP1-211ENST00000555178 H0YC42 278 aa9.73□□□□□ -0.85
TDP1-211ENST00000555178 GLSO94925 669 aaPredicted RBP9.73□□□□□ -0.85
TDP1-211ENST00000555178 TP53P04637 393 aaPredicted RBP9.73□□□□□ -0.85
TDP1-211ENST00000555178 CD46P15529 392 aa9.73□□□□□ -0.85
TDP1-211ENST00000555178 ENDOUP21128 410 aaKnown RBP9.73□□□□□ -0.85
TDP1-211ENST00000555178 ZNF41P51814 821 aaPredicted RBP9.73□□□□□ -0.85
TDP1-211ENST00000555178 TPD52P55327 224 aaPredicted RBP9.73□□□□□ -0.85
TDP1-211ENST00000555178 B3GALT5-AS1P59052 145 aa9.73□□□□□ -0.85
TDP1-211ENST00000555178 WIPI1Q5MNZ9 446 aaPredicted RBP9.73□□□□□ -0.85
TDP1-211ENST00000555178 SLC6A19Q695T7 634 aa9.73□□□□□ -0.85
TDP1-211ENST00000555178 C1orf94Q6P1W5 598 aa9.73□□□□□ -0.85
TDP1-211ENST00000555178 ADGRG3Q86Y34 549 aa9.73□□□□□ -0.85
TDP1-211ENST00000555178 KIF18BQ86Y91 864 aa9.73□□□□□ -0.85
TDP1-211ENST00000555178 ZADH2Q8N4Q0 377 aa9.73□□□□□ -0.85
TDP1-211ENST00000555178 TMEM251Q8N6I4 163 aa9.73□□□□□ -0.85
TDP1-211ENST00000555178 LRRC17Q8N6Y2 441 aa9.73□□□□□ -0.85
TDP1-211ENST00000555178 ATP6V1C2Q8NEY4 427 aa9.73□□□□□ -0.85
TDP1-211ENST00000555178 PIGXQ8TBF5 258 aa9.73□□□□□ -0.85
TDP1-211ENST00000555178 KTI12Q96EK9 354 aaPredicted RBP9.73□□□□□ -0.85
TDP1-211ENST00000555178 FAM173AQ9BQD7 235 aa9.73□□□□□ -0.85
TDP1-211ENST00000555178 PLA2G12AQ9BZM1 189 aa9.73□□□□□ -0.85
TDP1-211ENST00000555178 EGLN3Q9H6Z9 239 aa9.73□□□□□ -0.85
TDP1-211ENST00000555178 ZFP64Q9NPA5 681 aa9.73□□□□□ -0.85
TDP1-211ENST00000555178 SELENONQ9NZV5 590 aa9.73□□□□□ -0.85
TDP1-211ENST00000555178 REV1Q9UBZ9 1251 aa9.73□□□□□ -0.85
TDP1-211ENST00000555178 IL20RAQ9UHF4 553 aa9.73□□□□□ -0.85
TDP1-211ENST00000555178 SPTA1P02549 2419 aa9.73□□□□□ -0.85
TDP1-211ENST00000555178 KMT2BQ9UMN6 2715 aaPredicted RBP9.72□□□□□ -0.85
TDP1-211ENST00000555178 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.72□□□□□ -0.85
TDP1-211ENST00000555178 TMED7-TICAM2A0A0A6YYA0 188 aa9.72□□□□□ -0.85
TDP1-211ENST00000555178 M0R129 80 aa9.72□□□□□ -0.85
TDP1-211ENST00000555178 KLF4O43474 513 aa9.72□□□□□ -0.85
TDP1-211ENST00000555178 ADAP00813 363 aa9.72□□□□□ -0.85
TDP1-211ENST00000555178 PEPDP12955 493 aa9.72□□□□□ -0.85
TDP1-211ENST00000555178 ANXA8P13928 327 aa9.72□□□□□ -0.85
TDP1-211ENST00000555178 DPP4P27487 766 aa9.72□□□□□ -0.85
TDP1-211ENST00000555178 SUMO3P55854 103 aaPredicted RBP9.72□□□□□ -0.85
TDP1-211ENST00000555178 TOMM20Q15388 145 aa9.72□□□□□ -0.85
TDP1-211ENST00000555178 TAF11Q15544 211 aa9.72□□□□□ -0.85
TDP1-211ENST00000555178 PRR30Q53SZ7 412 aaPredicted RBP9.72□□□□□ -0.85
TDP1-211ENST00000555178 SWT1Q5T5J6 900 aaKnown RBP9.72□□□□□ -0.85
TDP1-211ENST00000555178 TMEM236Q5W0B7 351 aa9.72□□□□□ -0.85
TDP1-211ENST00000555178 TTC33Q6PID6 262 aaPredicted RBP9.72□□□□□ -0.85
TDP1-211ENST00000555178 RRM2BQ7LG56 351 aa9.72□□□□□ -0.85
TDP1-211ENST00000555178 GRINAQ7Z429 371 aa9.72□□□□□ -0.85
TDP1-211ENST00000555178 OR13C2Q8NGS9 318 aa9.72□□□□□ -0.85
TDP1-211ENST00000555178 BPIFA2Q96DR5 249 aa9.72□□□□□ -0.85
TDP1-211ENST00000555178 MPP4Q96JB8 637 aa9.72□□□□□ -0.85
TDP1-211ENST00000555178 C5orf34Q96MH7 638 aa9.72□□□□□ -0.85
TDP1-211ENST00000555178 DEFB127Q9H1M4 99 aa9.72□□□□□ -0.85
TDP1-211ENST00000555178 ZNF703Q9H7S9 590 aaPredicted RBP9.72□□□□□ -0.85
TDP1-211ENST00000555178 MGAT4BQ9UQ53 548 aa9.72□□□□□ -0.85
TDP1-211ENST00000555178 SLC6A5Q9Y345 797 aa9.72□□□□□ -0.85
TDP1-211ENST00000555178 TMED7Q9Y3B3 224 aa9.72□□□□□ -0.85
TDP1-211ENST00000555178 MED31Q9Y3C7 131 aa9.72□□□□□ -0.85
TDP1-211ENST00000555178 LRRC42Q9Y546 428 aa9.72□□□□□ -0.85
TDP1-211ENST00000555178 TRAV27A0A087WT01 109 aa9.72□□□□□ -0.85
TDP1-211ENST00000555178 H3BML4 177 aa9.72□□□□□ -0.85
TDP1-211ENST00000555178 SUSD5O60279 629 aa9.72□□□□□ -0.85
TDP1-211ENST00000555178 SNX4O95219 450 aa9.72□□□□□ -0.85
TDP1-211ENST00000555178 KLK2P20151 261 aa9.72□□□□□ -0.85
TDP1-211ENST00000555178 POU1F1P28069 291 aa9.72□□□□□ -0.85
TDP1-211ENST00000555178 STARP49675 285 aa9.72□□□□□ -0.85
TDP1-211ENST00000555178 POLR2HP52434 150 aaKnown RBP9.72□□□□□ -0.85
TDP1-211ENST00000555178 ZNF169Q14929 603 aaPredicted RBP9.72□□□□□ -0.85
TDP1-211ENST00000555178 ST3GAL2Q16842 350 aa9.72□□□□□ -0.85
TDP1-211ENST00000555178 SLC36A3Q495N2 470 aa9.72□□□□□ -0.85
TDP1-211ENST00000555178 PLXDC2Q6UX71 529 aa9.72□□□□□ -0.85
TDP1-211ENST00000555178 ZFP62Q8NB50 900 aaPredicted RBP9.72□□□□□ -0.85
TDP1-211ENST00000555178 FAM83FQ8NEG4 500 aaPredicted RBP9.72□□□□□ -0.85
TDP1-211ENST00000555178 OR8D4Q8NGM9 314 aa9.72□□□□□ -0.85
TDP1-211ENST00000555178 TFAP2CQ92754 450 aa9.72□□□□□ -0.85
TDP1-211ENST00000555178 CNBD2Q96M20 576 aa9.72□□□□□ -0.85
TDP1-211ENST00000555178 MOGAT1Q96PD6 335 aa9.72□□□□□ -0.85
TDP1-211ENST00000555178 DGCR6LQ9BY27 220 aa9.72□□□□□ -0.85
TDP1-211ENST00000555178 UCK2Q9BZX2 261 aa9.72□□□□□ -0.85
TDP1-211ENST00000555178 SLC6A15Q9H2J7 730 aa9.72□□□□□ -0.85
TDP1-211ENST00000555178 ZNF556Q9HAH1 456 aa9.72□□□□□ -0.85
TDP1-211ENST00000555178 FAM118AQ9NWS6 357 aa9.72□□□□□ -0.85
TDP1-211ENST00000555178 AASSQ9UDR5 926 aa9.72□□□□□ -0.85
TDP1-211ENST00000555178 SEC14L4Q9UDX3 406 aa9.72□□□□□ -0.85
TDP1-211ENST00000555178 POFUT2Q9Y2G5 429 aa9.72□□□□□ -0.85
TDP1-211ENST00000555178 KLF13Q9Y2Y9 288 aaPredicted RBP9.72□□□□□ -0.85
TDP1-211ENST00000555178 TRAPPC6AO75865 159 aa9.71□□□□□ -0.85
TDP1-211ENST00000555178 CH25HO95992 272 aa9.71□□□□□ -0.85
TDP1-211ENST00000555178 PNMTP11086 282 aa9.71□□□□□ -0.85
TDP1-211ENST00000555178 HK1P19367 917 aa9.71□□□□□ -0.85
TDP1-211ENST00000555178 CXCR1P25024 350 aa9.71□□□□□ -0.85
TDP1-211ENST00000555178 GDF1P27539 372 aa9.71□□□□□ -0.85
TDP1-211ENST00000555178 MSX1P28360 303 aa9.71□□□□□ -0.85
TDP1-211ENST00000555178 RBM34P42696 430 aaKnown RBP9.71□□□□□ -0.85
TDP1-211ENST00000555178 RPS5P46782 204 aaKnown RBP9.71□□□□□ -0.85
TDP1-211ENST00000555178 FXYD6P3P58550 94 aa9.71□□□□□ -0.85
TDP1-211ENST00000555178 ADARB1P78563 741 aaKnown RBP9.71□□□□□ -0.85
TDP1-211ENST00000555178 HSF1Q00613 529 aa9.71□□□□□ -0.85
TDP1-211ENST00000555178 PRKCDQ05655 676 aa9.71□□□□□ -0.85
TDP1-211ENST00000555178 LTBQ06643 244 aa9.71□□□□□ -0.85
TDP1-211ENST00000555178 TMEM44Q2T9K0 475 aa9.71□□□□□ -0.85
TDP1-211ENST00000555178 CCDC71Q8IV32 467 aaPredicted RBP9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms