RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 A0A087WV62 115 aa15.91■□□□□ 0.14
SHOX-204ENST00000554971 ARGFXA6NJG6 315 aa15.91■□□□□ 0.14
SHOX-204ENST00000554971 AK1P00568 194 aa15.91■□□□□ 0.14
SHOX-204ENST00000554971 RPS19P39019 145 aaKnown RBP15.91■□□□□ 0.14
SHOX-204ENST00000554971 MTNR1AP48039 350 aa15.91■□□□□ 0.14
SHOX-204ENST00000554971 GPR143P51810 404 aa15.91■□□□□ 0.14
SHOX-204ENST00000554971 RGS8P57771 180 aaPredicted RBP15.91■□□□□ 0.14
SHOX-204ENST00000554971 SERTAD2Q14140 314 aa15.91■□□□□ 0.14
SHOX-204ENST00000554971 MBOAT2Q6ZWT7 520 aa15.91■□□□□ 0.14
SHOX-204ENST00000554971 PRICKLE2Q7Z3G6 844 aa15.91■□□□□ 0.14
SHOX-204ENST00000554971 VRK2Q86Y07 508 aa15.91■□□□□ 0.14
SHOX-204ENST00000554971 ANKK1Q8NFD2 765 aa15.91■□□□□ 0.14
SHOX-204ENST00000554971 TMCO6Q96DC7 493 aa15.91■□□□□ 0.14
SHOX-204ENST00000554971 TXNDC15Q96J42 360 aa15.91■□□□□ 0.14
SHOX-204ENST00000554971 JAM3Q9BX67 310 aa15.91■□□□□ 0.14
SHOX-204ENST00000554971 ADAP2Q9NPF8 381 aa15.91■□□□□ 0.14
SHOX-204ENST00000554971 QPCTLQ9NXS2 382 aa15.91■□□□□ 0.14
SHOX-204ENST00000554971 CPAMD8Q8IZJ3 1885 aa15.91■□□□□ 0.14
SHOX-204ENST00000554971 KLF4O43474 513 aa15.9■□□□□ 0.14
SHOX-204ENST00000554971 SLC35E2P0CK97 266 aa15.9■□□□□ 0.14
SHOX-204ENST00000554971 SOX3P41225 446 aa15.9■□□□□ 0.14
SHOX-204ENST00000554971 ELAVL1Q15717 326 aaKnown RBP15.9■□□□□ 0.14
SHOX-204ENST00000554971 EXOSC6Q5RKV6 272 aaKnown RBP15.9■□□□□ 0.14
SHOX-204ENST00000554971 HSDL2Q6YN16 418 aa15.9■□□□□ 0.14
SHOX-204ENST00000554971 FRRS1Q6ZNA5 592 aa15.9■□□□□ 0.14
SHOX-204ENST00000554971 RNF113BQ8IZP6 322 aaKnown RBP15.9■□□□□ 0.14
SHOX-204ENST00000554971 APCDD1LQ8NCL9 501 aa15.9■□□□□ 0.14
SHOX-204ENST00000554971 RNFT2Q96EX2 444 aa15.9■□□□□ 0.14
SHOX-204ENST00000554971 MCHR1Q99705 422 aa15.9■□□□□ 0.14
SHOX-204ENST00000554971 PIGUQ9H490 435 aa15.9■□□□□ 0.14
SHOX-204ENST00000554971 C19orf53Q9UNZ5 99 aaPredicted RBP15.9■□□□□ 0.14
SHOX-204ENST00000554971 ZNF443Q9Y2A4 671 aaPredicted RBP15.9■□□□□ 0.14
SHOX-204ENST00000554971 FAM208BQ5VWN6 2430 aa15.9■□□□□ 0.14
SHOX-204ENST00000554971 NSG1A0A0A6YYJ2 146 aa15.9■□□□□ 0.14
SHOX-204ENST00000554971 PEX12O00623 359 aa15.9■□□□□ 0.14
SHOX-204ENST00000554971 HPP00738 406 aa15.9■□□□□ 0.14
SHOX-204ENST00000554971 IFNA16P05015 189 aa15.9■□□□□ 0.14
SHOX-204ENST00000554971 CT62P0C5K7 136 aa15.9■□□□□ 0.14
SHOX-204ENST00000554971 TSPAN19P0C672 248 aa15.9■□□□□ 0.14
SHOX-204ENST00000554971 TNFSF8P32971 234 aa15.9■□□□□ 0.14
SHOX-204ENST00000554971 ACSM1Q08AH1 577 aa15.9■□□□□ 0.14
SHOX-204ENST00000554971 COL28A1Q2UY09 1125 aa15.9■□□□□ 0.14
SHOX-204ENST00000554971 PLEKHM3Q6ZWE6 761 aa15.9■□□□□ 0.14
SHOX-204ENST00000554971 WDR53Q7Z5U6 358 aaPredicted RBP15.9■□□□□ 0.14
SHOX-204ENST00000554971 CLIP4Q8N3C7 705 aa15.9■□□□□ 0.14
SHOX-204ENST00000554971 ZNF321PQ8N8H1 164 aa15.9■□□□□ 0.14
SHOX-204ENST00000554971 POGLUT1Q8NBL1 392 aa15.9■□□□□ 0.14
SHOX-204ENST00000554971 OR7G2Q8NG99 324 aa15.9■□□□□ 0.14
SHOX-204ENST00000554971 KAT2AQ92830 837 aa15.9■□□□□ 0.14
SHOX-204ENST00000554971 SLC25A46Q96AG3 418 aa15.9■□□□□ 0.14
SHOX-204ENST00000554971 SLC41A3Q96GZ6 507 aa15.9■□□□□ 0.14
SHOX-204ENST00000554971 RBM18Q96H35 190 aaKnown RBP15.9■□□□□ 0.14
SHOX-204ENST00000554971 LPAR4Q99677 370 aa15.9■□□□□ 0.14
SHOX-204ENST00000554971 EQTNQ9NQ60 294 aa15.9■□□□□ 0.14
SHOX-204ENST00000554971 POLE3Q9NRF9 147 aa15.9■□□□□ 0.14
SHOX-204ENST00000554971 ZNF223Q9UK11 482 aaPredicted RBP15.9■□□□□ 0.14
SHOX-204ENST00000554971 PPIEQ9UNP9 301 aaKnown RBP15.9■□□□□ 0.14
SHOX-204ENST00000554971 GSTK1Q9Y2Q3 226 aa15.9■□□□□ 0.14
SHOX-204ENST00000554971 WDR45Q9Y484 360 aa15.9■□□□□ 0.14
SHOX-204ENST00000554971 CHST2Q9Y4C5 530 aa15.9■□□□□ 0.14
SHOX-204ENST00000554971 C17orf105B2RV13 164 aa15.89■□□□□ 0.13
SHOX-204ENST00000554971 FMO6PO60774 539 aa15.89■□□□□ 0.13
SHOX-204ENST00000554971 DDAH2O95865 285 aa15.89■□□□□ 0.13
SHOX-204ENST00000554971 ATP1B1P05026 303 aa15.89■□□□□ 0.13
SHOX-204ENST00000554971 FGF9P31371 208 aaPredicted RBP15.89■□□□□ 0.13
SHOX-204ENST00000554971 ETV1P50549 477 aa15.89■□□□□ 0.13
SHOX-204ENST00000554971 SLC26A5P58743 744 aa15.89■□□□□ 0.13
SHOX-204ENST00000554971 MGAT2Q10469 447 aa15.89■□□□□ 0.13
SHOX-204ENST00000554971 LTB4RQ15722 352 aa15.89■□□□□ 0.13
SHOX-204ENST00000554971 RANBP3LQ86VV4 465 aaPredicted RBP15.89■□□□□ 0.13
SHOX-204ENST00000554971 SIMC1Q8NDZ2 872 aa15.89■□□□□ 0.13
SHOX-204ENST00000554971 EXTL1Q92935 676 aa15.89■□□□□ 0.13
SHOX-204ENST00000554971 ITFG2Q969R8 447 aa15.89■□□□□ 0.13
SHOX-204ENST00000554971 DGAT2Q96PD7 388 aa15.89■□□□□ 0.13
SHOX-204ENST00000554971 STACQ99469 402 aa15.89■□□□□ 0.13
SHOX-204ENST00000554971 PLA2G12AQ9BZM1 189 aa15.89■□□□□ 0.13
SHOX-204ENST00000554971 DUSP22Q9NRW4 184 aa15.89■□□□□ 0.13
SHOX-204ENST00000554971 CPSF4LA6NMK7 179 aaKnown RBP15.88■□□□□ 0.13
SHOX-204ENST00000554971 CTDSP2O14595 271 aa15.88■□□□□ 0.13
SHOX-204ENST00000554971 PLOD3O60568 738 aa15.88■□□□□ 0.13
SHOX-204ENST00000554971 DBIP07108 87 aaKnown RBP15.88■□□□□ 0.13
SHOX-204ENST00000554971 GUSBP08236 651 aa15.88■□□□□ 0.13
SHOX-204ENST00000554971 GALP22466 123 aa15.88■□□□□ 0.13
SHOX-204ENST00000554971 PRICKLE4Q2TBC4 344 aa15.88■□□□□ 0.13
SHOX-204ENST00000554971 AADACL4Q5VUY2 407 aa15.88■□□□□ 0.13
SHOX-204ENST00000554971 TYW3Q6IPR3 259 aaKnown RBP15.88■□□□□ 0.13
SHOX-204ENST00000554971 TMPRSS11AQ6ZMR5 421 aa15.88■□□□□ 0.13
SHOX-204ENST00000554971 OLIG3Q7RTU3 272 aa15.88■□□□□ 0.13
SHOX-204ENST00000554971 GDF7Q7Z4P5 450 aa15.88■□□□□ 0.13
SHOX-204ENST00000554971 SLC16A11Q8NCK7 471 aa15.88■□□□□ 0.13
SHOX-204ENST00000554971 AP3S1Q92572 193 aa15.88■□□□□ 0.13
SHOX-204ENST00000554971 UFD1Q92890 307 aa15.88■□□□□ 0.13
SHOX-204ENST00000554971 EFHD2Q96C19 240 aaPredicted RBP15.88■□□□□ 0.13
SHOX-204ENST00000554971 ZG16BQ96DA0 208 aa15.88■□□□□ 0.13
SHOX-204ENST00000554971 KCTD7Q96MP8 289 aa15.88■□□□□ 0.13
SHOX-204ENST00000554971 QRSL1Q9H0R6 528 aaKnown RBP15.88■□□□□ 0.13
SHOX-204ENST00000554971 EGLN3Q9H6Z9 239 aa15.88■□□□□ 0.13
SHOX-204ENST00000554971 TXNL4BQ9NX01 149 aaKnown RBP15.88■□□□□ 0.13
SHOX-204ENST00000554971 EXOGQ9Y2C4 368 aaKnown RBP15.88■□□□□ 0.13
SHOX-204ENST00000554971 GPR55Q9Y2T6 319 aaPredicted RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms