RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 SLC26A5P58743 744 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 GABPB1Q06547 395 aaPredicted RBP1.19□□□□□ -2.22
PRPF39-208ENST00000554785 ZFP36L1Q07352 338 aaKnown RBP1.19□□□□□ -2.22
PRPF39-208ENST00000554785 COX10Q12887 443 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 SNX1Q13596 522 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 CYLC2Q14093 348 aaPredicted RBP1.19□□□□□ -2.22
PRPF39-208ENST00000554785 CCDC92Q53HC0 331 aaPredicted RBP1.19□□□□□ -2.22
PRPF39-208ENST00000554785 TAF3Q5VWG9 929 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 SEL1L3Q68CR1 1132 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 LEMD1Q68G75 181 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 RFWD3Q6PCD5 774 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 CASC1Q6TDU7 716 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 REG3GQ6UW15 175 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 ABRAXAS1Q6UWZ7 409 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 APOOLQ6UXV4 268 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 RBM43Q6ZSC3 357 aaKnown RBP1.19□□□□□ -2.22
PRPF39-208ENST00000554785 TMEM150AQ86TG1 271 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 RANBP3LQ86VV4 465 aaPredicted RBP1.19□□□□□ -2.22
PRPF39-208ENST00000554785 ZSCAN30Q86W11 494 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 AMZ2Q86W34 360 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 GPBP1Q86WP2 473 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 POM121L12Q8N7R1 296 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 ZNF491Q8N8L2 437 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 TBCKQ8TEA7 893 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 FAM222BQ8WU58 562 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 MRPS31Q92665 395 aaKnown RBP1.19□□□□□ -2.22
PRPF39-208ENST00000554785 PSMG2Q969U7 264 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 BIRC7Q96CA5 298 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 CCDC51Q96ER9 411 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 C14orf79Q96F83 325 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 SAMD8Q96LT4 415 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 CCNL2Q96S94 520 aaPredicted RBP1.19□□□□□ -2.22
PRPF39-208ENST00000554785 NDUFAF3Q9BU61 184 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 ST6GALNAC5Q9BVH7 336 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 RAB11FIP5Q9BXF6 653 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 TEKT3Q9BXF9 490 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 KRT23Q9C075 422 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 TMEM231Q9H6L2 316 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 ALG9Q9H6U8 611 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 SUDS3Q9H7L9 328 aaPredicted RBP1.19□□□□□ -2.22
PRPF39-208ENST00000554785 TRPV5Q9NQA5 729 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 XPNPEP1Q9NQW7 623 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 ABCC13Q9NSE7 274 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 ZNF446Q9NWS9 450 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 IL20RAQ9UHF4 553 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 BCAP29Q9UHQ4 241 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 CSAG2Q9Y5P2 127 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 SCN8AQ9UQD0 1980 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 AKAP9Q99996 3911 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 COL27A1Q8IZC6 1860 aaPredicted RBP1.19□□□□□ -2.22
PRPF39-208ENST00000554785 PIKFYVEQ9Y2I7 2098 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 TRPM6Q9BX84 2022 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 CHD5Q8TDI0 1954 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 A0A0J9YVX5 310 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 SMIM28A0A1B0GU29 152 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 A0A1W2PNU3 283 aaPredicted RBP1.19□□□□□ -2.22
PRPF39-208ENST00000554785 BICDL2A1A5D9 508 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 CCDC169A6NNP5 214 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 E7EWF7 191 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 LAD1O00515 517 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 E2F3O00716 465 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 SH3BGRLO75368 114 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 PDE5AO76074 875 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 STK17BO94768 372 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 ECDO95905 644 aaPredicted RBP1.19□□□□□ -2.22
PRPF39-208ENST00000554785 HPP00738 406 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 CCNA2P20248 432 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 GLRA2P23416 452 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 CYP2F1P24903 491 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 PRDX2P32119 198 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 SAA4P35542 130 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 ELK3P41970 407 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 MFAP2P55001 183 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 PSMC5P62195 406 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 TRA2BP62995 288 aaKnown RBP1.19□□□□□ -2.22
PRPF39-208ENST00000554785 BNIP1Q12981 228 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 PDIA5Q14554 519 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 ABRAXAS2Q15018 415 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 CD226Q15762 336 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 ZKSCAN8Q15776 578 aaPredicted RBP1.19□□□□□ -2.22
PRPF39-208ENST00000554785 ZNF77Q15935 545 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 ZSWIM7Q19AV6 140 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 C17orf58Q2M2W7 97 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 ZNF699Q32M78 642 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 CNPY1Q3B7I2 92 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 C14orf28Q4W4Y0 310 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 NHLRC3Q5JS37 347 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 EOGTQ5NDL2 527 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 LINC00242Q5T6M2 205 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 FHL5Q5TD97 284 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 FAM219BQ5XKK7 198 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 CENPPQ6IPU0 288 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 ATRAIDQ6UW56 229 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 CD300LGQ6UXG3 332 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 GOLGA7Q7Z5G4 137 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 BBS7Q8IWZ6 715 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 FGFRL1Q8N441 504 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 ARL14Q8N4G2 192 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 RNF148Q8N7C7 305 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 CNNM3Q8NE01 707 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms