RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 ADAMTS9Q9P2N4 1935 aa3.79□□□□□ -1.8
SCFD1-211ENST00000554437 IGHV3OR16-12A0A075B7B8 117 aa3.78□□□□□ -1.8
SCFD1-211ENST00000554437 A0A1W2PPV4 95 aa3.78□□□□□ -1.8
SCFD1-211ENST00000554437 CCT8L1PA6NM43 557 aa3.78□□□□□ -1.8
SCFD1-211ENST00000554437 H3BMH7 237 aa3.78□□□□□ -1.8
SCFD1-211ENST00000554437 WWP2O00308 870 aa3.78□□□□□ -1.8
SCFD1-211ENST00000554437 CYB561D2O14569 222 aa3.78□□□□□ -1.8
SCFD1-211ENST00000554437 SNAI1O95863 264 aaPredicted RBP3.78□□□□□ -1.8
SCFD1-211ENST00000554437 ERCC1P07992 297 aaPredicted RBP3.78□□□□□ -1.8
SCFD1-211ENST00000554437 IGFBP1P08833 259 aaPredicted RBP3.78□□□□□ -1.8
SCFD1-211ENST00000554437 SNRPCP09234 159 aaKnown RBP3.78□□□□□ -1.8
SCFD1-211ENST00000554437 CLTAP09496 248 aa3.78□□□□□ -1.8
SCFD1-211ENST00000554437 CCNB1P14635 433 aa3.78□□□□□ -1.8
SCFD1-211ENST00000554437 HPGDP15428 266 aa3.78□□□□□ -1.8
SCFD1-211ENST00000554437 OTX1P32242 354 aaPredicted RBP3.78□□□□□ -1.8
SCFD1-211ENST00000554437 YWHAEP62258 255 aaKnown RBP3.78□□□□□ -1.8
SCFD1-211ENST00000554437 MRPS6P82932 125 aaKnown RBP3.78□□□□□ -1.8
SCFD1-211ENST00000554437 XRCC4Q13426 336 aa3.78□□□□□ -1.8
SCFD1-211ENST00000554437 MICBQ29980 383 aa3.78□□□□□ -1.8
SCFD1-211ENST00000554437 ZNF829Q3KNS6 432 aaPredicted RBP3.78□□□□□ -1.8
SCFD1-211ENST00000554437 RNF212Q495C1 297 aa3.78□□□□□ -1.8
SCFD1-211ENST00000554437 SBK1Q52WX2 424 aa3.78□□□□□ -1.8
SCFD1-211ENST00000554437 SFT2D3Q587I9 215 aa3.78□□□□□ -1.8
SCFD1-211ENST00000554437 MLIPQ5VWP3 458 aa3.78□□□□□ -1.8
SCFD1-211ENST00000554437 FAM71F2Q6NXP2 309 aa3.78□□□□□ -1.8
SCFD1-211ENST00000554437 SCARA5Q6ZMJ2 495 aa3.78□□□□□ -1.8
SCFD1-211ENST00000554437 H2BFWTQ7Z2G1 175 aa3.78□□□□□ -1.8
SCFD1-211ENST00000554437 NET1Q7Z628 596 aaPredicted RBP3.78□□□□□ -1.8
SCFD1-211ENST00000554437 CENPSQ8N2Z9 138 aa3.78□□□□□ -1.8
SCFD1-211ENST00000554437 CLDN19Q8N6F1 224 aa3.78□□□□□ -1.8
SCFD1-211ENST00000554437 Q8N9G6 341 aaPredicted RBP3.78□□□□□ -1.8
SCFD1-211ENST00000554437 RAB1CQ92928 201 aa3.78□□□□□ -1.8
SCFD1-211ENST00000554437 UPRTQ96BW1 309 aa3.78□□□□□ -1.8
SCFD1-211ENST00000554437 C10orf35Q96D05 121 aa3.78□□□□□ -1.8
SCFD1-211ENST00000554437 PPP1R16AQ96I34 528 aa3.78□□□□□ -1.8
SCFD1-211ENST00000554437 C8orf76Q96K31 380 aa3.78□□□□□ -1.8
SCFD1-211ENST00000554437 KCNS3Q9BQ31 491 aa3.78□□□□□ -1.8
SCFD1-211ENST00000554437 LZTS2Q9BRK4 669 aa3.78□□□□□ -1.8
SCFD1-211ENST00000554437 GPR174Q9BXC1 333 aa3.78□□□□□ -1.8
SCFD1-211ENST00000554437 PARD6BQ9BYG5 372 aa3.78□□□□□ -1.8
SCFD1-211ENST00000554437 KRTAP4-3Q9BYR4 195 aa3.78□□□□□ -1.8
SCFD1-211ENST00000554437 IL22Q9GZX6 179 aa3.78□□□□□ -1.8
SCFD1-211ENST00000554437 LRRN3Q9H3W5 708 aa3.78□□□□□ -1.8
SCFD1-211ENST00000554437 RHOJQ9H4E5 214 aa3.78□□□□□ -1.8
SCFD1-211ENST00000554437 NARFLQ9H6Q4 476 aa3.78□□□□□ -1.8
SCFD1-211ENST00000554437 C20orf96Q9NUD7 363 aaPredicted RBP3.78□□□□□ -1.8
SCFD1-211ENST00000554437 SENP1Q9P0U3 644 aa3.78□□□□□ -1.8
SCFD1-211ENST00000554437 PSMC3IPQ9P2W1 217 aaPredicted RBP3.78□□□□□ -1.8
SCFD1-211ENST00000554437 PITPNC1Q9UKF7 332 aa3.78□□□□□ -1.8
SCFD1-211ENST00000554437 ABCG2Q9UNQ0 655 aa3.78□□□□□ -1.8
SCFD1-211ENST00000554437 RHBDD3Q9Y3P4 386 aa3.78□□□□□ -1.8
SCFD1-211ENST00000554437 CSDC2Q9Y534 153 aaKnown RBP3.78□□□□□ -1.8
SCFD1-211ENST00000554437 ZNF318Q5VUA4 2279 aa3.78□□□□□ -1.8
SCFD1-211ENST00000554437 INSRP06213 1382 aa3.77□□□□□ -1.81
SCFD1-211ENST00000554437 TPM3P06753 285 aa3.77□□□□□ -1.81
SCFD1-211ENST00000554437 ANXA3P12429 323 aa3.77□□□□□ -1.81
SCFD1-211ENST00000554437 ETS2P15036 469 aa3.77□□□□□ -1.81
SCFD1-211ENST00000554437 HNRNPH3P31942 346 aaKnown RBP3.77□□□□□ -1.81
SCFD1-211ENST00000554437 MAGEA5P43359 124 aa3.77□□□□□ -1.81
SCFD1-211ENST00000554437 TFDP1Q14186 410 aa3.77□□□□□ -1.81
SCFD1-211ENST00000554437 TEX44Q53QW1 395 aa3.77□□□□□ -1.81
SCFD1-211ENST00000554437 OLFML2AQ68BL7 652 aa3.77□□□□□ -1.81
SCFD1-211ENST00000554437 ZNF562Q6V9R5 426 aa3.77□□□□□ -1.81
SCFD1-211ENST00000554437 GCNT7Q6ZNI0 430 aa3.77□□□□□ -1.81
SCFD1-211ENST00000554437 SCD5Q86SK9 330 aa3.77□□□□□ -1.81
SCFD1-211ENST00000554437 RANBP3LQ86VV4 465 aaPredicted RBP3.77□□□□□ -1.81
SCFD1-211ENST00000554437 TMEM17Q86X19 198 aa3.77□□□□□ -1.81
SCFD1-211ENST00000554437 MYOCDQ8IZQ8 938 aa3.77□□□□□ -1.81
SCFD1-211ENST00000554437 PYROXD2Q8N2H3 581 aa3.77□□□□□ -1.81
SCFD1-211ENST00000554437 MFSD9Q8NBP5 474 aa3.77□□□□□ -1.81
SCFD1-211ENST00000554437 TRPV1Q8NER1 839 aa3.77□□□□□ -1.81
SCFD1-211ENST00000554437 OR1F12Q8NHA8 337 aa3.77□□□□□ -1.81
SCFD1-211ENST00000554437 ZNF596Q8TC21 504 aa3.77□□□□□ -1.81
SCFD1-211ENST00000554437 CD300LFQ8TDQ1 290 aa3.77□□□□□ -1.81
SCFD1-211ENST00000554437 DDI1Q8WTU0 396 aa3.77□□□□□ -1.81
SCFD1-211ENST00000554437 CIDECQ96AQ7 238 aaPredicted RBP3.77□□□□□ -1.81
SCFD1-211ENST00000554437 ELMO2Q96JJ3 720 aa3.77□□□□□ -1.81
SCFD1-211ENST00000554437 CPXM1Q96SM3 734 aa3.77□□□□□ -1.81
SCFD1-211ENST00000554437 LLPHQ9BRT6 129 aaKnown RBP3.77□□□□□ -1.81
SCFD1-211ENST00000554437 DPH7Q9BTV6 452 aa3.77□□□□□ -1.81
SCFD1-211ENST00000554437 TEKT3Q9BXF9 490 aa3.77□□□□□ -1.81
SCFD1-211ENST00000554437 ROGDIQ9GZN7 287 aa3.77□□□□□ -1.81
SCFD1-211ENST00000554437 MRPS30Q9NP92 439 aaKnown RBP3.77□□□□□ -1.81
SCFD1-211ENST00000554437 TIGARQ9NQ88 270 aa3.77□□□□□ -1.81
SCFD1-211ENST00000554437 PNO1Q9NRX1 252 aaKnown RBP3.77□□□□□ -1.81
SCFD1-211ENST00000554437 NUDT15Q9NV35 164 aa3.77□□□□□ -1.81
SCFD1-211ENST00000554437 MTCH1Q9NZJ7 389 aa3.77□□□□□ -1.81
SCFD1-211ENST00000554437 GHRLQ9UBU3 117 aa3.77□□□□□ -1.81
SCFD1-211ENST00000554437 CD300AQ9UGN4 299 aa3.77□□□□□ -1.81
SCFD1-211ENST00000554437 IKZF2Q9UKS7 526 aa3.77□□□□□ -1.81
SCFD1-211ENST00000554437 MAD1L1Q9Y6D9 718 aa3.77□□□□□ -1.81
SCFD1-211ENST00000554437 PNPLA6Q8IY17 1366 aa3.76□□□□□ -1.81
SCFD1-211ENST00000554437 A0A1B0GUH1 482 aa3.76□□□□□ -1.81
SCFD1-211ENST00000554437 A0A1W2PNV4 684 aa3.76□□□□□ -1.81
SCFD1-211ENST00000554437 FAM168BA1KXE4 195 aa3.76□□□□□ -1.81
SCFD1-211ENST00000554437 HAS3O00219 553 aa3.76□□□□□ -1.81
SCFD1-211ENST00000554437 HIP1O00291 1037 aa3.76□□□□□ -1.81
SCFD1-211ENST00000554437 EI24O14681 340 aa3.76□□□□□ -1.81
SCFD1-211ENST00000554437 PDE5AO76074 875 aa3.76□□□□□ -1.81
SCFD1-211ENST00000554437 OR2F2O95006 317 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms