RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 NANOGP8Q6NSW7 305 aa7.91□□□□□ -1.14
TDP1-208ENST00000553989 GATSQ8NAP1 163 aa7.91□□□□□ -1.14
TDP1-208ENST00000553989 OR9I1Q8NGQ6 314 aa7.91□□□□□ -1.14
TDP1-208ENST00000553989 OR10D3Q8NH80 312 aa7.91□□□□□ -1.14
TDP1-208ENST00000553989 GPR151Q8TDV0 419 aa7.91□□□□□ -1.14
TDP1-208ENST00000553989 NRBF2Q96F24 287 aa7.91□□□□□ -1.14
TDP1-208ENST00000553989 AURKBQ96GD4 344 aaPredicted RBP7.91□□□□□ -1.14
TDP1-208ENST00000553989 GMPPAQ96IJ6 420 aaPredicted RBP7.91□□□□□ -1.14
TDP1-208ENST00000553989 NSMCE2Q96MF7 247 aa7.91□□□□□ -1.14
TDP1-208ENST00000553989 KCNA7Q96RP8 456 aa7.91□□□□□ -1.14
TDP1-208ENST00000553989 ADI1Q9BV57 179 aa7.91□□□□□ -1.14
TDP1-208ENST00000553989 RTN4RQ9BZR6 473 aa7.91□□□□□ -1.14
TDP1-208ENST00000553989 ACTR6Q9GZN1 396 aa7.91□□□□□ -1.14
TDP1-208ENST00000553989 C12orf49Q9H741 205 aa7.91□□□□□ -1.14
TDP1-208ENST00000553989 NANOGQ9H9S0 305 aa7.91□□□□□ -1.14
TDP1-208ENST00000553989 PLGRKTQ9HBL7 147 aa7.91□□□□□ -1.14
TDP1-208ENST00000553989 ASIC5Q9NY37 505 aa7.91□□□□□ -1.14
TDP1-208ENST00000553989 SMPD3Q9NY59 655 aaPredicted RBP7.91□□□□□ -1.14
TDP1-208ENST00000553989 C19orf53Q9UNZ5 99 aaPredicted RBP7.91□□□□□ -1.14
TDP1-208ENST00000553989 LAMP3Q9UQV4 416 aa7.91□□□□□ -1.14
TDP1-208ENST00000553989 POLR3HQ9Y535 204 aaPredicted RBP7.91□□□□□ -1.14
TDP1-208ENST00000553989 DSCAMO60469 2012 aa7.91□□□□□ -1.14
TDP1-208ENST00000553989 JMJD1CQ15652 2540 aa7.91□□□□□ -1.14
TDP1-208ENST00000553989 NSD1Q96L73 2696 aaPredicted RBP7.91□□□□□ -1.14
TDP1-208ENST00000553989 TCRBV5S2A0A599 114 aa7.9□□□□□ -1.14
TDP1-208ENST00000553989 MYO1GB0I1T2 1018 aa7.9□□□□□ -1.14
TDP1-208ENST00000553989 FXYD1O00168 92 aa7.9□□□□□ -1.14
TDP1-208ENST00000553989 UPK1AO00322 258 aa7.9□□□□□ -1.14
TDP1-208ENST00000553989 SOCS2O14508 198 aa7.9□□□□□ -1.14
TDP1-208ENST00000553989 TNFSF11O14788 317 aa7.9□□□□□ -1.14
TDP1-208ENST00000553989 HS3ST1O14792 307 aa7.9□□□□□ -1.14
TDP1-208ENST00000553989 GSTA4O15217 222 aa7.9□□□□□ -1.14
TDP1-208ENST00000553989 PLAUP00749 431 aa7.9□□□□□ -1.14
TDP1-208ENST00000553989 OPN1LWP04000 364 aa7.9□□□□□ -1.14
TDP1-208ENST00000553989 TP53P04637 393 aaPredicted RBP7.9□□□□□ -1.14
TDP1-208ENST00000553989 THBDP07204 575 aa7.9□□□□□ -1.14
TDP1-208ENST00000553989 RAP2AP10114 183 aa7.9□□□□□ -1.14
TDP1-208ENST00000553989 HPGDP15428 266 aa7.9□□□□□ -1.14
TDP1-208ENST00000553989 ZNF17P17021 662 aa7.9□□□□□ -1.14
TDP1-208ENST00000553989 JUNBP17275 347 aaPredicted RBP7.9□□□□□ -1.14
TDP1-208ENST00000553989 ATP6V1B2P21281 511 aa7.9□□□□□ -1.14
TDP1-208ENST00000553989 LOXP28300 417 aaPredicted RBP7.9□□□□□ -1.14
TDP1-208ENST00000553989 SLC6A8P48029 635 aa7.9□□□□□ -1.14
TDP1-208ENST00000553989 PRKAG1P54619 331 aa7.9□□□□□ -1.14
TDP1-208ENST00000553989 UFM1P61960 85 aa7.9□□□□□ -1.14
TDP1-208ENST00000553989 RPS4XP62701 263 aaKnown RBP7.9□□□□□ -1.14
TDP1-208ENST00000553989 CAPRIN1Q14444 709 aaKnown RBP7.9□□□□□ -1.14
TDP1-208ENST00000553989 GLYR1Q49A26 553 aaPredicted RBP7.9□□□□□ -1.14
TDP1-208ENST00000553989 PDSS1Q5T2R2 415 aa7.9□□□□□ -1.14
TDP1-208ENST00000553989 DHRS4L2Q6PKH6 230 aa7.9□□□□□ -1.14
TDP1-208ENST00000553989 STAC2Q6ZMT1 411 aa7.9□□□□□ -1.14
TDP1-208ENST00000553989 BEND4Q6ZU67 534 aa7.9□□□□□ -1.14
TDP1-208ENST00000553989 C22orf34Q6ZV56 151 aa7.9□□□□□ -1.14
TDP1-208ENST00000553989 CXXC5Q7LFL8 322 aaKnown RBP7.9□□□□□ -1.14
TDP1-208ENST00000553989 GALNT10Q86SR1 603 aa7.9□□□□□ -1.14
TDP1-208ENST00000553989 RIMKLAQ8IXN7 391 aa7.9□□□□□ -1.14
TDP1-208ENST00000553989 OR2L13Q8N349 312 aa7.9□□□□□ -1.14
TDP1-208ENST00000553989 SVOPLQ8N434 492 aa7.9□□□□□ -1.14
TDP1-208ENST00000553989 FNDC5Q8NAU1 212 aa7.9□□□□□ -1.14
TDP1-208ENST00000553989 FBXO30Q8TB52 745 aa7.9□□□□□ -1.14
TDP1-208ENST00000553989 FAM81AQ8TBF8 368 aa7.9□□□□□ -1.14
TDP1-208ENST00000553989 PIK3R3Q92569 461 aa7.9□□□□□ -1.14
TDP1-208ENST00000553989 AKAP1Q92667 903 aaKnown RBP eCLIP7.9□□□□□ -1.14
TDP1-208ENST00000553989 GTPBP3Q969Y2 492 aaKnown RBP7.9□□□□□ -1.14
TDP1-208ENST00000553989 REXO5Q96IC2 774 aaKnown RBP7.9□□□□□ -1.14
TDP1-208ENST00000553989 LMF2Q9BU23 707 aaKnown RBP7.9□□□□□ -1.14
TDP1-208ENST00000553989 CHID1Q9BWS9 393 aa7.9□□□□□ -1.14
TDP1-208ENST00000553989 GLIPR2Q9H4G4 154 aa7.9□□□□□ -1.14
TDP1-208ENST00000553989 TMEM185BQ9H7F4 350 aa7.9□□□□□ -1.14
TDP1-208ENST00000553989 PAQR5Q9NXK6 330 aaPredicted RBP7.9□□□□□ -1.14
TDP1-208ENST00000553989 GMEB1Q9Y692 573 aa7.9□□□□□ -1.14
TDP1-208ENST00000553989 GXYLT2A0PJZ3 443 aa7.89□□□□□ -1.15
TDP1-208ENST00000553989 SAC3D1A6NKF1 404 aa7.89□□□□□ -1.15
TDP1-208ENST00000553989 TTC36A6NLP5 189 aa7.89□□□□□ -1.15
TDP1-208ENST00000553989 PDPK1O15530 556 aa7.89□□□□□ -1.15
TDP1-208ENST00000553989 KLF4O43474 513 aa7.89□□□□□ -1.15
TDP1-208ENST00000553989 CXCL13O43927 109 aa7.89□□□□□ -1.15
TDP1-208ENST00000553989 NOL3O60936 208 aaKnown RBP7.89□□□□□ -1.15
TDP1-208ENST00000553989 SS18L1O75177 396 aaPredicted RBP7.89□□□□□ -1.15
TDP1-208ENST00000553989 PRSS23O95084 383 aa7.89□□□□□ -1.15
TDP1-208ENST00000553989 IL32P24001 234 aa7.89□□□□□ -1.15
TDP1-208ENST00000553989 ALDH3A2P51648 485 aa7.89□□□□□ -1.15
TDP1-208ENST00000553989 FOXA1P55317 472 aa7.89□□□□□ -1.15
TDP1-208ENST00000553989 ADARB1P78563 741 aaKnown RBP7.89□□□□□ -1.15
TDP1-208ENST00000553989 PRR5P85299 388 aa7.89□□□□□ -1.15
TDP1-208ENST00000553989 RELBQ01201 579 aa7.89□□□□□ -1.15
TDP1-208ENST00000553989 TNK1Q13470 666 aa7.89□□□□□ -1.15
TDP1-208ENST00000553989 GK3PQ14409 553 aa7.89□□□□□ -1.15
TDP1-208ENST00000553989 GUSBP1Q15486 140 aa7.89□□□□□ -1.15
TDP1-208ENST00000553989 CLEC12BQ2HXU8 276 aa7.89□□□□□ -1.15
TDP1-208ENST00000553989 CTU2Q2VPK5 515 aaKnown RBP7.89□□□□□ -1.15
TDP1-208ENST00000553989 RFX4Q33E94 735 aa7.89□□□□□ -1.15
TDP1-208ENST00000553989 RBM48Q5RL73 367 aaKnown RBP7.89□□□□□ -1.15
TDP1-208ENST00000553989 HBMQ6B0K9 141 aa7.89□□□□□ -1.15
TDP1-208ENST00000553989 GTF2IRD2BQ6EKJ0 949 aa7.89□□□□□ -1.15
TDP1-208ENST00000553989 GALNT18Q6P9A2 607 aa7.89□□□□□ -1.15
TDP1-208ENST00000553989 DLEU7Q6UYE1 221 aa7.89□□□□□ -1.15
TDP1-208ENST00000553989 Q6ZSR9 355 aa7.89□□□□□ -1.15
TDP1-208ENST00000553989 USP51Q70EK9 711 aa7.89□□□□□ -1.15
TDP1-208ENST00000553989 TRIM46Q7Z4K8 759 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms