RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 SDF2L1Q9HCN8 221 aa4.67□□□□□ -1.66
SCFD1-208ENST00000553278 LZTFL1Q9NQ48 299 aa4.67□□□□□ -1.66
SCFD1-208ENST00000553278 LYARQ9NX58 379 aaKnown RBP4.67□□□□□ -1.66
SCFD1-208ENST00000553278 SENP1Q9P0U3 644 aa4.67□□□□□ -1.66
SCFD1-208ENST00000553278 COMMD3-BMI1R4GMX3 469 aa4.67□□□□□ -1.66
SCFD1-208ENST00000553278 CLSPNQ9HAW4 1339 aa4.67□□□□□ -1.66
SCFD1-208ENST00000553278 A0A1B0GUS0 222 aa4.66□□□□□ -1.66
SCFD1-208ENST00000553278 MEX3AA1L020 520 aaKnown RBP4.66□□□□□ -1.66
SCFD1-208ENST00000553278 KIF2AO00139 706 aaPredicted RBP4.66□□□□□ -1.66
SCFD1-208ENST00000553278 HIP1O00291 1037 aa4.66□□□□□ -1.66
SCFD1-208ENST00000553278 HCN1O60741 890 aa4.66□□□□□ -1.66
SCFD1-208ENST00000553278 BBOX1O75936 387 aa4.66□□□□□ -1.66
SCFD1-208ENST00000553278 LYPD3O95274 346 aa4.66□□□□□ -1.66
SCFD1-208ENST00000553278 OXSR1O95747 527 aaPredicted RBP4.66□□□□□ -1.66
SCFD1-208ENST00000553278 ZNF853P0CG23 659 aa4.66□□□□□ -1.66
SCFD1-208ENST00000553278 CT45A10P0DMU9 189 aa4.66□□□□□ -1.66
SCFD1-208ENST00000553278 GCFC2P16383 781 aaKnown RBP4.66□□□□□ -1.66
SCFD1-208ENST00000553278 GSTM3P21266 225 aa4.66□□□□□ -1.66
SCFD1-208ENST00000553278 CPN2P22792 545 aa4.66□□□□□ -1.66
SCFD1-208ENST00000553278 GTF2E2P29084 291 aaKnown RBP4.66□□□□□ -1.66
SCFD1-208ENST00000553278 PRDX3P30048 256 aaKnown RBP4.66□□□□□ -1.66
SCFD1-208ENST00000553278 RFX3P48380 749 aa4.66□□□□□ -1.66
SCFD1-208ENST00000553278 GSK3BP49841 420 aa4.66□□□□□ -1.66
SCFD1-208ENST00000553278 CSRP3P50461 194 aa4.66□□□□□ -1.66
SCFD1-208ENST00000553278 MRPS11P82912 194 aaKnown RBP4.66□□□□□ -1.66
SCFD1-208ENST00000553278 SCRN3Q0VDG4 424 aa4.66□□□□□ -1.66
SCFD1-208ENST00000553278 PPIL2Q13356 520 aa4.66□□□□□ -1.66
SCFD1-208ENST00000553278 NKAIN1Q4KMZ8 207 aa4.66□□□□□ -1.66
SCFD1-208ENST00000553278 FAM182AQ5T1J6 154 aa4.66□□□□□ -1.66
SCFD1-208ENST00000553278 C4orf32Q8N8J7 132 aa4.66□□□□□ -1.66
SCFD1-208ENST00000553278 Q8NBF4 154 aa4.66□□□□□ -1.66
SCFD1-208ENST00000553278 B3GNT7Q8NFL0 401 aa4.66□□□□□ -1.66
SCFD1-208ENST00000553278 GPX8Q8TED1 209 aa4.66□□□□□ -1.66
SCFD1-208ENST00000553278 ARNTL2Q8WYA1 636 aa4.66□□□□□ -1.66
SCFD1-208ENST00000553278 GTF3AQ92664 365 aaKnown RBP4.66□□□□□ -1.66
SCFD1-208ENST00000553278 UFD1Q92890 307 aa4.66□□□□□ -1.66
SCFD1-208ENST00000553278 P2RY13Q9BPV8 354 aa4.66□□□□□ -1.66
SCFD1-208ENST00000553278 RIOK1Q9BRS2 568 aaKnown RBP4.66□□□□□ -1.66
SCFD1-208ENST00000553278 ANKRD60Q9BZ19 345 aa4.66□□□□□ -1.66
SCFD1-208ENST00000553278 RBKSQ9H477 322 aa4.66□□□□□ -1.66
SCFD1-208ENST00000553278 HAUS4Q9H6D7 363 aa4.66□□□□□ -1.66
SCFD1-208ENST00000553278 CAB39LQ9H9S4 337 aa4.66□□□□□ -1.66
SCFD1-208ENST00000553278 MRPS30Q9NP92 439 aaKnown RBP4.66□□□□□ -1.66
SCFD1-208ENST00000553278 INPP5EQ9NRR6 644 aa4.66□□□□□ -1.66
SCFD1-208ENST00000553278 PTTG3PQ9NZH4 202 aa4.66□□□□□ -1.66
SCFD1-208ENST00000553278 PRODH2Q9UF12 536 aa4.66□□□□□ -1.66
SCFD1-208ENST00000553278 PLEKHH1Q9ULM0 1364 aa4.65□□□□□ -1.66
SCFD1-208ENST00000553278 FRMPD3Q5JV73 1810 aa4.65□□□□□ -1.66
SCFD1-208ENST00000553278 LOC100131303A0A0U1RQF7 123 aa4.65□□□□□ -1.67
SCFD1-208ENST00000553278 A0A1B0GTH9 108 aa4.65□□□□□ -1.67
SCFD1-208ENST00000553278 RPL37AP8A6NKH3 93 aa4.65□□□□□ -1.67
SCFD1-208ENST00000553278 VSTM2BA6NLU5 285 aa4.65□□□□□ -1.67
SCFD1-208ENST00000553278 A8MXK9 166 aa4.65□□□□□ -1.67
SCFD1-208ENST00000553278 ZNF487B1APH4 448 aa4.65□□□□□ -1.67
SCFD1-208ENST00000553278 TOM1O60784 492 aa4.65□□□□□ -1.67
SCFD1-208ENST00000553278 TRIM49P0CI25 452 aa4.65□□□□□ -1.67
SCFD1-208ENST00000553278 TRIM49CP0CI26 452 aa4.65□□□□□ -1.67
SCFD1-208ENST00000553278 IDSP22304 550 aa4.65□□□□□ -1.67
SCFD1-208ENST00000553278 UGT1A4P22310 534 aa4.65□□□□□ -1.67
SCFD1-208ENST00000553278 IL12AP29459 219 aa4.65□□□□□ -1.67
SCFD1-208ENST00000553278 HMOX2P30519 316 aa4.65□□□□□ -1.67
SCFD1-208ENST00000553278 EPHX2P34913 555 aa4.65□□□□□ -1.67
SCFD1-208ENST00000553278 UQCRFS1P47985 274 aa4.65□□□□□ -1.67
SCFD1-208ENST00000553278 DMTNQ08495 405 aa4.65□□□□□ -1.67
SCFD1-208ENST00000553278 GNMTQ14749 295 aa4.65□□□□□ -1.67
SCFD1-208ENST00000553278 SLC10A1Q14973 349 aa4.65□□□□□ -1.67
SCFD1-208ENST00000553278 OXA1LQ15070 435 aa4.65□□□□□ -1.67
SCFD1-208ENST00000553278 ISXQ2M1V0 245 aa4.65□□□□□ -1.67
SCFD1-208ENST00000553278 FBXO48Q5FWF7 155 aa4.65□□□□□ -1.67
SCFD1-208ENST00000553278 C9orf66Q5T8R8 295 aa4.65□□□□□ -1.67
SCFD1-208ENST00000553278 HSDL2Q6YN16 418 aa4.65□□□□□ -1.67
SCFD1-208ENST00000553278 PGAP1Q75T13 922 aa4.65□□□□□ -1.67
SCFD1-208ENST00000553278 VTCN1Q7Z7D3 282 aa4.65□□□□□ -1.67
SCFD1-208ENST00000553278 FBXL16Q8N461 479 aa4.65□□□□□ -1.67
SCFD1-208ENST00000553278 PQLC3Q8N755 202 aa4.65□□□□□ -1.67
SCFD1-208ENST00000553278 TPRX1Q8N7U7 411 aa4.65□□□□□ -1.67
SCFD1-208ENST00000553278 OR8K3Q8NH51 312 aa4.65□□□□□ -1.67
SCFD1-208ENST00000553278 VOPP1Q96AW1 172 aa4.65□□□□□ -1.67
SCFD1-208ENST00000553278 LRRC39Q96DD0 335 aa4.65□□□□□ -1.67
SCFD1-208ENST00000553278 ZBED6CLQ96FA7 236 aaPredicted RBP4.65□□□□□ -1.67
SCFD1-208ENST00000553278 SEC22AQ96IW7 307 aa4.65□□□□□ -1.67
SCFD1-208ENST00000553278 ZNF597Q96LX8 424 aa4.65□□□□□ -1.67
SCFD1-208ENST00000553278 LITAFQ99732 161 aa4.65□□□□□ -1.67
SCFD1-208ENST00000553278 TEKT3Q9BXF9 490 aa4.65□□□□□ -1.67
SCFD1-208ENST00000553278 FGFBP2Q9BYJ0 223 aa4.65□□□□□ -1.67
SCFD1-208ENST00000553278 ELOVL6Q9H5J4 265 aa4.65□□□□□ -1.67
SCFD1-208ENST00000553278 IMPAD1Q9NX62 359 aa4.65□□□□□ -1.67
SCFD1-208ENST00000553278 B3GNT2Q9NY97 397 aa4.65□□□□□ -1.67
SCFD1-208ENST00000553278 ANGPTL2Q9UKU9 493 aa4.65□□□□□ -1.67
SCFD1-208ENST00000553278 STK38LQ9Y2H1 464 aa4.65□□□□□ -1.67
SCFD1-208ENST00000553278 KCNIP3Q9Y2W7 256 aa4.65□□□□□ -1.67
SCFD1-208ENST00000553278 PIK3R4Q99570 1358 aa4.65□□□□□ -1.67
SCFD1-208ENST00000553278 IGHV3-16A0A0C4DH30 117 aa4.64□□□□□ -1.67
SCFD1-208ENST00000553278 SMCO2A6NFE2 343 aa4.64□□□□□ -1.67
SCFD1-208ENST00000553278 SLC17A2O00624 439 aa4.64□□□□□ -1.67
SCFD1-208ENST00000553278 HSD17B6O14756 317 aa4.64□□□□□ -1.67
SCFD1-208ENST00000553278 CHMP2AO43633 222 aa4.64□□□□□ -1.67
SCFD1-208ENST00000553278 SCRG1O75711 98 aa4.64□□□□□ -1.67
SCFD1-208ENST00000553278 PLEKP08567 350 aaPredicted RBP4.64□□□□□ -1.67
SCFD1-208ENST00000553278 CT62P0C5K7 136 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms