RNA–Protein interactions for RNA: ENST00000552823.5

LIMA1-215, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-215ENST00000552823 OR5K4A6NMS3 321 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 ZNF670-ZNF695F2Z2N8 137 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 H3BML4 177 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 SYT5O00445 386 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 EEF1E1O43324 174 aaKnown RBP5.14□□□□□ -1.59
LIMA1-215ENST00000552823 ZNF749O43361 778 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 AKAP8O43823 692 aaKnown RBP5.14□□□□□ -1.59
LIMA1-215ENST00000552823 BRINP1O60477 761 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 POU2F2P09086 479 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 CD3GP09693 182 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 APEHP13798 732 aaKnown RBP5.14□□□□□ -1.59
LIMA1-215ENST00000552823 CLDN6P56747 220 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 SNRPD2P62316 118 aaKnown RBP5.14□□□□□ -1.59
LIMA1-215ENST00000552823 RAB40BQ12829 278 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 BIKQ13323 160 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 GRM7Q14831 915 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 PHF19Q5T6S3 580 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 AADACL4Q5VUY2 407 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 LRRC69Q6ZNQ3 347 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 Q8N402 240 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 DNAAF1Q8NEP3 725 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 BEST4Q8NFU0 473 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 OR6N2Q8NGY6 317 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 DUSP19Q8WTR2 217 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 HSD17B8Q92506 261 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 GHSRQ92847 366 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 ZNF524Q96C55 264 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 SCARF2Q96GP6 870 aaPredicted RBP5.14□□□□□ -1.59
LIMA1-215ENST00000552823 ADAD1Q96M93 576 aaKnown RBP5.14□□□□□ -1.59
LIMA1-215ENST00000552823 KRCC1Q9NPI7 259 aaPredicted RBP5.14□□□□□ -1.59
LIMA1-215ENST00000552823 IL20Q9NYY1 176 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 GMEB2Q9UKD1 530 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 PAIP2BQ9ULR5 123 aaKnown RBP5.14□□□□□ -1.59
LIMA1-215ENST00000552823 ENTPD2Q9Y5L3 495 aa5.14□□□□□ -1.59
LIMA1-215ENST00000552823 A0A075B6Q4 140 aa5.13□□□□□ -1.59
LIMA1-215ENST00000552823 PRR19A6NJB7 356 aa5.13□□□□□ -1.59
LIMA1-215ENST00000552823 SCDO00767 359 aa5.13□□□□□ -1.59
LIMA1-215ENST00000552823 DPM1O60762 260 aa5.13□□□□□ -1.59
LIMA1-215ENST00000552823 CTNSO60931 367 aa5.13□□□□□ -1.59
LIMA1-215ENST00000552823 SYPP08247 313 aa5.13□□□□□ -1.59
LIMA1-215ENST00000552823 CT45A8P0DMV1 189 aa5.13□□□□□ -1.59
LIMA1-215ENST00000552823 CT45A9P0DMV2 189 aa5.13□□□□□ -1.59
LIMA1-215ENST00000552823 ZNF3P17036 446 aa5.13□□□□□ -1.59
LIMA1-215ENST00000552823 HK1P19367 917 aa5.13□□□□□ -1.59
LIMA1-215ENST00000552823 TACR3P29371 465 aa5.13□□□□□ -1.59
LIMA1-215ENST00000552823 IL12BP29460 328 aa5.13□□□□□ -1.59
LIMA1-215ENST00000552823 SELENBP1Q13228 472 aa5.13□□□□□ -1.59
LIMA1-215ENST00000552823 MELKQ14680 651 aa5.13□□□□□ -1.59
LIMA1-215ENST00000552823 ZSWIM7Q19AV6 140 aa5.13□□□□□ -1.59
LIMA1-215ENST00000552823 PLK5Q496M5 336 aa5.13□□□□□ -1.59
LIMA1-215ENST00000552823 ACSM3Q53FZ2 586 aa5.13□□□□□ -1.59
LIMA1-215ENST00000552823 CT45A2Q5DJT8 189 aa5.13□□□□□ -1.59
LIMA1-215ENST00000552823 ZNF322Q6U7Q0 402 aaPredicted RBP5.13□□□□□ -1.59
LIMA1-215ENST00000552823 SLC35F3Q8IY50 421 aa5.13□□□□□ -1.59
LIMA1-215ENST00000552823 UXS1Q8NBZ7 420 aa5.13□□□□□ -1.59
LIMA1-215ENST00000552823 OR4D9Q8NGE8 314 aa5.13□□□□□ -1.59
LIMA1-215ENST00000552823 OR1L3Q8NH93 324 aa5.13□□□□□ -1.59
LIMA1-215ENST00000552823 FYTTD1Q96QD9 318 aaKnown RBP5.13□□□□□ -1.59
LIMA1-215ENST00000552823 OR14A2Q96R54 314 aa5.13□□□□□ -1.59
LIMA1-215ENST00000552823 SDHCQ99643 169 aaPredicted RBP5.13□□□□□ -1.59
LIMA1-215ENST00000552823 FUZQ9BT04 418 aa5.13□□□□□ -1.59
LIMA1-215ENST00000552823 NDC1Q9BTX1 674 aa5.13□□□□□ -1.59
LIMA1-215ENST00000552823 PHF7Q9BWX1 381 aaPredicted RBP5.13□□□□□ -1.59
LIMA1-215ENST00000552823 TBL1XR1Q9BZK7 514 aa5.13□□□□□ -1.59
LIMA1-215ENST00000552823 KCNN2Q9H2S1 579 aa5.13□□□□□ -1.59
LIMA1-215ENST00000552823 NANSQ9NR45 359 aa5.13□□□□□ -1.59
LIMA1-215ENST00000552823 INIPQ9NRY2 104 aa5.13□□□□□ -1.59
LIMA1-215ENST00000552823 FGF21Q9NSA1 209 aa5.13□□□□□ -1.59
LIMA1-215ENST00000552823 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.13□□□□□ -1.59
LIMA1-215ENST00000552823 ACOXLQ9NUZ1 547 aa5.13□□□□□ -1.59
LIMA1-215ENST00000552823 BABAM2Q9NXR7 383 aa5.13□□□□□ -1.59
LIMA1-215ENST00000552823 PLEKHB1Q9UF11 243 aaPredicted RBP5.13□□□□□ -1.59
LIMA1-215ENST00000552823 TESQ9UGI8 421 aaKnown RBP5.13□□□□□ -1.59
LIMA1-215ENST00000552823 SIGLEC7Q9Y286 467 aa5.13□□□□□ -1.59
LIMA1-215ENST00000552823 EXOSC1Q9Y3B2 195 aaKnown RBP5.13□□□□□ -1.59
LIMA1-215ENST00000552823 A0A0G2JMP0 313 aa5.13□□□□□ -1.59
LIMA1-215ENST00000552823 TRBV2A0A0J9YWF9 115 aa5.13□□□□□ -1.59
LIMA1-215ENST00000552823 A0A0X1KG70 313 aa5.13□□□□□ -1.59
LIMA1-215ENST00000552823 TEX51A0A1B0GUA7 166 aa5.13□□□□□ -1.59
LIMA1-215ENST00000552823 MEIS3P1A6NDR6 274 aa5.13□□□□□ -1.59
LIMA1-215ENST00000552823 SERINC4A6NH21 518 aa5.13□□□□□ -1.59
LIMA1-215ENST00000552823 TRIM64BA6NI03 449 aa5.13□□□□□ -1.59
LIMA1-215ENST00000552823 METTL12A8MUP2 240 aa5.13□□□□□ -1.59
LIMA1-215ENST00000552823 PATE3B3GLJ2 98 aa5.13□□□□□ -1.59
LIMA1-215ENST00000552823 H0YIG0 161 aa5.13□□□□□ -1.59
LIMA1-215ENST00000552823 SOX1O00570 391 aaPredicted RBP5.13□□□□□ -1.59
LIMA1-215ENST00000552823 ICOSLGO75144 302 aa5.13□□□□□ -1.59
LIMA1-215ENST00000552823 COQ9O75208 318 aa5.13□□□□□ -1.59
LIMA1-215ENST00000552823 HLA-DPB1P04440 258 aa5.13□□□□□ -1.59
LIMA1-215ENST00000552823 DRD5P21918 477 aa5.13□□□□□ -1.59
LIMA1-215ENST00000552823 UGT2B10P36537 528 aa5.13□□□□□ -1.59
LIMA1-215ENST00000552823 GRK6P43250 576 aa5.13□□□□□ -1.59
LIMA1-215ENST00000552823 ATP12AP54707 1039 aa5.13□□□□□ -1.59
LIMA1-215ENST00000552823 HNRNPKP61978 463 aaKnown RBP eCLIP5.13□□□□□ -1.59
LIMA1-215ENST00000552823 RACK1P63244 317 aaKnown RBP5.13□□□□□ -1.59
LIMA1-215ENST00000552823 PON3Q15166 354 aa5.13□□□□□ -1.59
LIMA1-215ENST00000552823 INPP5JQ15735 1006 aaPredicted RBP5.13□□□□□ -1.59
LIMA1-215ENST00000552823 KCNJ8Q15842 424 aa5.13□□□□□ -1.59
LIMA1-215ENST00000552823 ZNF79Q15937 498 aa5.13□□□□□ -1.59
LIMA1-215ENST00000552823 MEP1BQ16820 701 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms