RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 DPY19L2P2Q6ZN68 376 aa12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 SLC22A16Q86VW1 577 aa12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 SYT14Q8NB59 555 aa12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 ELOA3Q8NG57 546 aa12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 OR1N1Q8NGS0 311 aa12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 TMEM43Q9BTV4 400 aa12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 TMED9Q9BVK6 235 aa12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 NRSN2Q9GZP1 204 aa12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 LAT2Q9GZY6 243 aa12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 ADGRL4Q9HBW9 690 aa12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 PLEKHB1Q9UF11 243 aaPredicted RBP12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 TNRC6BQ9UPQ9 1833 aaKnown RBP12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 USP34Q70CQ2 3546 aa12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 LY6G6EA0A0G2JKS1 128 aa12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 CPED1A4D0V7 1026 aa12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 RGS5O15539 181 aa12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 TSPAN2O60636 221 aa12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 ICOSLGO75144 302 aa12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 SNX4O95219 450 aa12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 HLA-DPB1P04440 258 aa12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 MRPL3P09001 348 aaKnown RBP12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 CCR4P51679 360 aa12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 NR0B1P51843 470 aaKnown RBP12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 PSPHP78330 225 aa12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 PMS2CLQ68D20 193 aa12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 DESI1Q6ICB0 168 aa12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 RHBDD2Q6NTF9 364 aa12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 GUSBP11Q6P575 273 aa12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 COX15Q7KZN9 410 aa12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 WDR5BQ86VZ2 330 aa12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 DRAXINQ8NBI3 349 aaPredicted RBP12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 FAM98AQ8NCA5 519 aaKnown RBP12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 OR4K13Q8NH42 304 aa12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 ASB15Q8WXK1 588 aa12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 SMPDL3BQ92485 455 aa12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 WDFY2Q96P53 400 aa12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 KATNB1Q9BVA0 655 aa12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 WWTR1Q9GZV5 400 aa12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 POLE4Q9NR33 117 aa12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 SLC22A11Q9NSA0 550 aa12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 COPS7AQ9UBW8 275 aa12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 CTSFQ9UBX1 484 aa12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 SRPK3Q9UPE1 567 aa12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 U3KQA8 63 aa12.82□□□□□ -0.36
RAB3IP-216ENST00000552199 CDC14CA4D256 554 aa12.81□□□□□ -0.36
RAB3IP-216ENST00000552199 SLC35F4A4IF30 521 aa12.81□□□□□ -0.36
RAB3IP-216ENST00000552199 OR6C76A6NM76 312 aa12.81□□□□□ -0.36
RAB3IP-216ENST00000552199 GABRPO00591 440 aa12.81□□□□□ -0.36
RAB3IP-216ENST00000552199 GYPBP06028 91 aa12.81□□□□□ -0.36
RAB3IP-216ENST00000552199 GALP22466 123 aa12.81□□□□□ -0.36
RAB3IP-216ENST00000552199 IL12BP29460 328 aa12.81□□□□□ -0.36
RAB3IP-216ENST00000552199 RPL4P36578 427 aaKnown RBP12.81□□□□□ -0.36
RAB3IP-216ENST00000552199 RANBP1P43487 201 aa12.81□□□□□ -0.36
RAB3IP-216ENST00000552199 RPS4XP62701 263 aaKnown RBP12.81□□□□□ -0.36
RAB3IP-216ENST00000552199 POU4F2Q12837 409 aa12.81□□□□□ -0.36
RAB3IP-216ENST00000552199 SLC29A4Q7RTT9 530 aa12.81□□□□□ -0.36
RAB3IP-216ENST00000552199 RABEPKQ7Z6M1 372 aa12.81□□□□□ -0.36
RAB3IP-216ENST00000552199 MARCH9Q86YJ5 346 aa12.81□□□□□ -0.36
RAB3IP-216ENST00000552199 SDR9C7Q8NEX9 313 aa12.81□□□□□ -0.36
RAB3IP-216ENST00000552199 SAP25Q8TEE9 199 aa12.81□□□□□ -0.36
RAB3IP-216ENST00000552199 LIPHQ8WWY8 451 aa12.81□□□□□ -0.36
RAB3IP-216ENST00000552199 DCLRE1CQ96SD1 692 aaKnown RBP12.81□□□□□ -0.36
RAB3IP-216ENST00000552199 HDHD5Q9BXW7 423 aa12.81□□□□□ -0.36
RAB3IP-216ENST00000552199 TGIF2Q9GZN2 237 aa12.81□□□□□ -0.36
RAB3IP-216ENST00000552199 NRIP3Q9NQ35 241 aa12.81□□□□□ -0.36
RAB3IP-216ENST00000552199 PILRBQ9UKJ0 227 aa12.81□□□□□ -0.36
RAB3IP-216ENST00000552199 TRAPPC4Q9Y296 219 aa12.81□□□□□ -0.36
RAB3IP-216ENST00000552199 CMAHPQ9Y471 501 aa12.81□□□□□ -0.36
RAB3IP-216ENST00000552199 PI4KAP42356 2102 aa12.8□□□□□ -0.36
RAB3IP-216ENST00000552199 ARPC3O15145 178 aa12.8□□□□□ -0.36
RAB3IP-216ENST00000552199 RNF13O43567 381 aa12.8□□□□□ -0.36
RAB3IP-216ENST00000552199 MT-ND5P03915 603 aa12.8□□□□□ -0.36
RAB3IP-216ENST00000552199 ANKRD34CP0C6C1 535 aa12.8□□□□□ -0.36
RAB3IP-216ENST00000552199 MST1P26927 711 aa12.8□□□□□ -0.36
RAB3IP-216ENST00000552199 GRK6P43250 576 aa12.8□□□□□ -0.36
RAB3IP-216ENST00000552199 SLC6A8P48029 635 aa12.8□□□□□ -0.36
RAB3IP-216ENST00000552199 PRPS1P60891 318 aa12.8□□□□□ -0.36
RAB3IP-216ENST00000552199 ACY1Q03154 408 aa12.8□□□□□ -0.36
RAB3IP-216ENST00000552199 ZNF85Q03923 595 aa12.8□□□□□ -0.36
RAB3IP-216ENST00000552199 LANCL3Q6ZV70 420 aa12.8□□□□□ -0.36
RAB3IP-216ENST00000552199 LAX1Q8IWV1 398 aa12.8□□□□□ -0.36
RAB3IP-216ENST00000552199 ZNF441Q8N8Z8 693 aa12.8□□□□□ -0.36
RAB3IP-216ENST00000552199 GALNT6Q8NCL4 622 aa12.8□□□□□ -0.36
RAB3IP-216ENST00000552199 ZNF524Q96C55 264 aa12.8□□□□□ -0.36
RAB3IP-216ENST00000552199 RNF31Q96EP0 1072 aa12.8□□□□□ -0.36
RAB3IP-216ENST00000552199 SDHCQ99643 169 aaPredicted RBP12.8□□□□□ -0.36
RAB3IP-216ENST00000552199 RTN4RQ9BZR6 473 aa12.8□□□□□ -0.36
RAB3IP-216ENST00000552199 SLC7A5P2Q9GIP4 190 aa12.8□□□□□ -0.36
RAB3IP-216ENST00000552199 SP140LQ9H930 580 aa12.8□□□□□ -0.36
RAB3IP-216ENST00000552199 SUSD2Q9UGT4 822 aa12.8□□□□□ -0.36
RAB3IP-216ENST00000552199 MUTYHQ9UIF7 546 aa12.8□□□□□ -0.36
RAB3IP-216ENST00000552199 ADAM18Q9Y3Q7 739 aa12.8□□□□□ -0.36
RAB3IP-216ENST00000552199 SIRT4Q9Y6E7 314 aaPredicted RBP12.8□□□□□ -0.36
RAB3IP-216ENST00000552199 A0A1W2PQD3 144 aa12.8□□□□□ -0.36
RAB3IP-216ENST00000552199 SIGLEC6O43699 453 aa12.8□□□□□ -0.36
RAB3IP-216ENST00000552199 IDH3BO43837 385 aa12.8□□□□□ -0.36
RAB3IP-216ENST00000552199 HNRNPCP07910 306 aaKnown RBP eCLIP12.8□□□□□ -0.36
RAB3IP-216ENST00000552199 ACTC1P68032 377 aa12.8□□□□□ -0.36
RAB3IP-216ENST00000552199 ACTA1P68133 377 aa12.8□□□□□ -0.36
RAB3IP-216ENST00000552199 CCL7P80098 99 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms