RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 MAGEA2P43356 314 aa11.7□□□□□ -0.54
RAB5C-206ENST00000550406 TAS2R41P59536 307 aa11.7□□□□□ -0.54
RAB5C-206ENST00000550406 LSM11P83369 360 aaKnown RBP eCLIP11.7□□□□□ -0.54
RAB5C-206ENST00000550406 LTBQ06643 244 aa11.7□□□□□ -0.54
RAB5C-206ENST00000550406 MYBPHQ13203 477 aa11.7□□□□□ -0.54
RAB5C-206ENST00000550406 ELOA3BQ3SY89 546 aa11.7□□□□□ -0.54
RAB5C-206ENST00000550406 ACSF3Q4G176 576 aaPredicted RBP11.7□□□□□ -0.54
RAB5C-206ENST00000550406 SWT1Q5T5J6 900 aaKnown RBP11.7□□□□□ -0.54
RAB5C-206ENST00000550406 TMPPEQ6ZT21 453 aa11.7□□□□□ -0.54
RAB5C-206ENST00000550406 PIWIL3Q7Z3Z3 882 aaKnown RBP11.7□□□□□ -0.54
RAB5C-206ENST00000550406 MEIOBQ8N635 442 aa11.7□□□□□ -0.54
RAB5C-206ENST00000550406 PIK3C3Q8NEB9 887 aa11.7□□□□□ -0.54
RAB5C-206ENST00000550406 ELOA3Q8NG57 546 aa11.7□□□□□ -0.54
RAB5C-206ENST00000550406 OR10D3Q8NH80 312 aa11.7□□□□□ -0.54
RAB5C-206ENST00000550406 PRR7Q8TB68 274 aa11.7□□□□□ -0.54
RAB5C-206ENST00000550406 SLC25A43Q8WUT9 341 aaPredicted RBP11.7□□□□□ -0.54
RAB5C-206ENST00000550406 OSTF1Q92882 214 aa11.7□□□□□ -0.54
RAB5C-206ENST00000550406 LRGUKQ96M69 825 aa11.7□□□□□ -0.54
RAB5C-206ENST00000550406 UCN2Q96RP3 112 aa11.7□□□□□ -0.54
RAB5C-206ENST00000550406 DMRTA2Q96SC8 542 aa11.7□□□□□ -0.54
RAB5C-206ENST00000550406 PTDSS2Q9BVG9 487 aa11.7□□□□□ -0.54
RAB5C-206ENST00000550406 POTEKPQ9BYX7 375 aa11.7□□□□□ -0.54
RAB5C-206ENST00000550406 TP63Q9H3D4 680 aaPredicted RBP11.7□□□□□ -0.54
RAB5C-206ENST00000550406 MAGIXQ9H6Y5 334 aa11.7□□□□□ -0.54
RAB5C-206ENST00000550406 CLCF1Q9UBD9 225 aa11.7□□□□□ -0.54
RAB5C-206ENST00000550406 SH3BGRL2Q9UJC5 107 aa11.7□□□□□ -0.54
RAB5C-206ENST00000550406 ZNF462Q96JM2 2506 aa11.7□□□□□ -0.54
RAB5C-206ENST00000550406 A8MVM7 634 aa11.69□□□□□ -0.54
RAB5C-206ENST00000550406 FTCDNL1E5RQL4 147 aa11.69□□□□□ -0.54
RAB5C-206ENST00000550406 WDR1O75083 606 aa11.69□□□□□ -0.54
RAB5C-206ENST00000550406 TGM6O95932 706 aa11.69□□□□□ -0.54
RAB5C-206ENST00000550406 TFPIP10646 304 aa11.69□□□□□ -0.54
RAB5C-206ENST00000550406 UMPSP11172 480 aa11.69□□□□□ -0.54
RAB5C-206ENST00000550406 GABRA1P14867 456 aa11.69□□□□□ -0.54
RAB5C-206ENST00000550406 NQO1P15559 274 aaKnown RBP11.69□□□□□ -0.54
RAB5C-206ENST00000550406 RHCEP18577 417 aa11.69□□□□□ -0.54
RAB5C-206ENST00000550406 EIF1AXP47813 144 aaKnown RBP11.69□□□□□ -0.54
RAB5C-206ENST00000550406 CLK1P49759 484 aaKnown RBP11.69□□□□□ -0.54
RAB5C-206ENST00000550406 MAP2K6P52564 334 aa11.69□□□□□ -0.54
RAB5C-206ENST00000550406 FOXD4Q12950 439 aaPredicted RBP11.69□□□□□ -0.54
RAB5C-206ENST00000550406 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.69□□□□□ -0.54
RAB5C-206ENST00000550406 C1orf185Q5T7R7 199 aa11.69□□□□□ -0.54
RAB5C-206ENST00000550406 HBMQ6B0K9 141 aa11.69□□□□□ -0.54
RAB5C-206ENST00000550406 RPTNQ6XPR3 784 aa11.69□□□□□ -0.54
RAB5C-206ENST00000550406 SPATA24Q86W54 205 aa11.69□□□□□ -0.54
RAB5C-206ENST00000550406 ZDHHC21Q8IVQ6 265 aa11.69□□□□□ -0.54
RAB5C-206ENST00000550406 OFCC1Q8IZS5 231 aa11.69□□□□□ -0.54
RAB5C-206ENST00000550406 RNF217Q8TC41 542 aa11.69□□□□□ -0.54
RAB5C-206ENST00000550406 STK35Q8TDR2 534 aa11.69□□□□□ -0.54
RAB5C-206ENST00000550406 TAAR8Q969N4 342 aa11.69□□□□□ -0.54
RAB5C-206ENST00000550406 KTI12Q96EK9 354 aaPredicted RBP11.69□□□□□ -0.54
RAB5C-206ENST00000550406 DHRS1Q96LJ7 313 aa11.69□□□□□ -0.54
RAB5C-206ENST00000550406 OR5B2Q96R09 309 aa11.69□□□□□ -0.54
RAB5C-206ENST00000550406 FUZQ9BT04 418 aa11.69□□□□□ -0.54
RAB5C-206ENST00000550406 NMNAT1Q9HAN9 279 aaPredicted RBP11.69□□□□□ -0.54
RAB5C-206ENST00000550406 STOML1Q9UBI4 398 aa11.69□□□□□ -0.54
RAB5C-206ENST00000550406 HIVEP3Q5T1R4 2406 aa11.69□□□□□ -0.54
RAB5C-206ENST00000550406 DHRS12A0PJE2 317 aa11.68□□□□□ -0.54
RAB5C-206ENST00000550406 FIGNL2A6NMB9 653 aa11.68□□□□□ -0.54
RAB5C-206ENST00000550406 GJE1A6NN92 205 aa11.68□□□□□ -0.54
RAB5C-206ENST00000550406 ZNF814B7Z6K7 855 aa11.68□□□□□ -0.54
RAB5C-206ENST00000550406 ANKRD65E5RJM6 399 aa11.68□□□□□ -0.54
RAB5C-206ENST00000550406 FZD7O75084 574 aa11.68□□□□□ -0.54
RAB5C-206ENST00000550406 TOXO94900 526 aa11.68□□□□□ -0.54
RAB5C-206ENST00000550406 STAMBPO95630 424 aa11.68□□□□□ -0.54
RAB5C-206ENST00000550406 PMS2P2O95744 297 aa11.68□□□□□ -0.54
RAB5C-206ENST00000550406 BGLAPP02818 100 aa11.68□□□□□ -0.54
RAB5C-206ENST00000550406 FABP3P05413 133 aa11.68□□□□□ -0.54
RAB5C-206ENST00000550406 GLI4P10075 376 aa11.68□□□□□ -0.54
RAB5C-206ENST00000550406 THRBP10828 461 aa11.68□□□□□ -0.54
RAB5C-206ENST00000550406 FKBP2P26885 142 aaKnown RBP11.68□□□□□ -0.54
RAB5C-206ENST00000550406 DIO1P49895 249 aa11.68□□□□□ -0.54
RAB5C-206ENST00000550406 UGT2B15P54855 530 aa11.68□□□□□ -0.54
RAB5C-206ENST00000550406 CARD18P57730 90 aa11.68□□□□□ -0.54
RAB5C-206ENST00000550406 CHRNB3Q05901 458 aa11.68□□□□□ -0.54
RAB5C-206ENST00000550406 SRSF1Q07955 248 aaKnown RBP eCLIP11.68□□□□□ -0.54
RAB5C-206ENST00000550406 ST3GAL3Q11203 375 aa11.68□□□□□ -0.54
RAB5C-206ENST00000550406 FAM98BQ52LJ0 330 aaKnown RBP11.68□□□□□ -0.54
RAB5C-206ENST00000550406 C1orf146Q5VVC0 180 aa11.68□□□□□ -0.54
RAB5C-206ENST00000550406 C1orf140Q5VVS0 124 aa11.68□□□□□ -0.54
RAB5C-206ENST00000550406 NSUN5P2Q63ZY6 315 aa11.68□□□□□ -0.54
RAB5C-206ENST00000550406 TBPL2Q6SJ96 375 aa11.68□□□□□ -0.54
RAB5C-206ENST00000550406 C9orf106Q8NAJ2 232 aa11.68□□□□□ -0.54
RAB5C-206ENST00000550406 PAPD5Q8NDF8 572 aaKnown RBP11.68□□□□□ -0.54
RAB5C-206ENST00000550406 TMEM255BQ8WV15 326 aa11.68□□□□□ -0.54
RAB5C-206ENST00000550406 DDIT4LQ96D03 193 aa11.68□□□□□ -0.54
RAB5C-206ENST00000550406 MPP4Q96JB8 637 aa11.68□□□□□ -0.54
RAB5C-206ENST00000550406 TRIB1Q96RU8 372 aa11.68□□□□□ -0.54
RAB5C-206ENST00000550406 PIP5K1AQ99755 562 aa11.68□□□□□ -0.54
RAB5C-206ENST00000550406 TTYH2Q9BSA4 534 aa11.68□□□□□ -0.54
RAB5C-206ENST00000550406 TMEM43Q9BTV4 400 aa11.68□□□□□ -0.54
RAB5C-206ENST00000550406 FNDC11Q9BVV2 318 aa11.68□□□□□ -0.54
RAB5C-206ENST00000550406 CHID1Q9BWS9 393 aa11.68□□□□□ -0.54
RAB5C-206ENST00000550406 TRIM15Q9C019 465 aa11.68□□□□□ -0.54
RAB5C-206ENST00000550406 CALHM2Q9HA72 323 aa11.68□□□□□ -0.54
RAB5C-206ENST00000550406 MEPEQ9NQ76 525 aaPredicted RBP11.68□□□□□ -0.54
RAB5C-206ENST00000550406 CCM2LQ9NUG4 571 aaPredicted RBP11.68□□□□□ -0.54
RAB5C-206ENST00000550406 TRAPPC4Q9Y296 219 aa11.68□□□□□ -0.54
RAB5C-206ENST00000550406 MEMO1Q9Y316 297 aa11.68□□□□□ -0.54
RAB5C-206ENST00000550406 HDGFL3Q9Y3E1 203 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms