RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 PIGXQ8TBF5 258 aa15.33■□□□□ 0.04
CHMP1A-208ENST00000550102 DNAJA3Q96EY1 480 aa15.33■□□□□ 0.04
CHMP1A-208ENST00000550102 WFIKKN1Q96NZ8 548 aa15.33■□□□□ 0.04
CHMP1A-208ENST00000550102 ZNF607Q96SK3 696 aa15.33■□□□□ 0.04
CHMP1A-208ENST00000550102 ADAM19Q9H013 955 aa15.33■□□□□ 0.04
CHMP1A-208ENST00000550102 TMEM181Q9P2C4 612 aa15.33■□□□□ 0.04
CHMP1A-208ENST00000550102 KLHL14Q9P2G3 628 aa15.33■□□□□ 0.04
CHMP1A-208ENST00000550102 ING1Q9UK53 422 aaPredicted RBP15.33■□□□□ 0.04
CHMP1A-208ENST00000550102 TRAPPC4Q9Y296 219 aa15.33■□□□□ 0.04
CHMP1A-208ENST00000550102 CHST2Q9Y4C5 530 aa15.33■□□□□ 0.04
CHMP1A-208ENST00000550102 PRORSD1PA6NEY8 169 aa15.32■□□□□ 0.04
CHMP1A-208ENST00000550102 ZNF724A8MTY0 619 aa15.32■□□□□ 0.04
CHMP1A-208ENST00000550102 PPP3CBP16298 524 aa15.32■□□□□ 0.04
CHMP1A-208ENST00000550102 AQP1P29972 269 aa15.32■□□□□ 0.04
CHMP1A-208ENST00000550102 OR2B6P58173 313 aa15.32■□□□□ 0.04
CHMP1A-208ENST00000550102 SLC35A1P78382 337 aa15.32■□□□□ 0.04
CHMP1A-208ENST00000550102 MAPRE2Q15555 327 aa15.32■□□□□ 0.04
CHMP1A-208ENST00000550102 ADRM1Q16186 407 aa15.32■□□□□ 0.04
CHMP1A-208ENST00000550102 DHRS4L2Q6PKH6 230 aa15.32■□□□□ 0.04
CHMP1A-208ENST00000550102 STAC2Q6ZMT1 411 aa15.32■□□□□ 0.04
CHMP1A-208ENST00000550102 NRGNQ92686 78 aa15.32■□□□□ 0.04
CHMP1A-208ENST00000550102 ZNF300Q96RE9 604 aaPredicted RBP15.32■□□□□ 0.04
CHMP1A-208ENST00000550102 SAR1AQ9NR31 198 aa15.32■□□□□ 0.04
CHMP1A-208ENST00000550102 EDARQ9UNE0 448 aa15.32■□□□□ 0.04
CHMP1A-208ENST00000550102 MAP1AP78559 2803 aaPredicted RBP15.32■□□□□ 0.04
CHMP1A-208ENST00000550102 IGKV3D-15A0A087WSY6 115 aa15.31■□□□□ 0.04
CHMP1A-208ENST00000550102 ZC3H12DA2A288 527 aaKnown RBP15.31■□□□□ 0.04
CHMP1A-208ENST00000550102 BBIP1A8MTZ0 92 aa15.31■□□□□ 0.04
CHMP1A-208ENST00000550102 FRS3O43559 492 aa15.31■□□□□ 0.04
CHMP1A-208ENST00000550102 EIF1BO60739 113 aaKnown RBP15.31■□□□□ 0.04
CHMP1A-208ENST00000550102 SERPINB7O75635 380 aa15.31■□□□□ 0.04
CHMP1A-208ENST00000550102 HRGP04196 525 aa15.31■□□□□ 0.04
CHMP1A-208ENST00000550102 PSMB1P20618 241 aaKnown RBP15.31■□□□□ 0.04
CHMP1A-208ENST00000550102 CRYGSP22914 178 aa15.31■□□□□ 0.04
CHMP1A-208ENST00000550102 IDUAP35475 653 aa15.31■□□□□ 0.04
CHMP1A-208ENST00000550102 OR3A2P47893 321 aa15.31■□□□□ 0.04
CHMP1A-208ENST00000550102 NCALDP61601 193 aa15.31■□□□□ 0.04
CHMP1A-208ENST00000550102 RBBP4Q09028 425 aa15.31■□□□□ 0.04
CHMP1A-208ENST00000550102 KLF10Q13118 480 aa15.31■□□□□ 0.04
CHMP1A-208ENST00000550102 PDK3Q15120 406 aa15.31■□□□□ 0.04
CHMP1A-208ENST00000550102 POU4F3Q15319 338 aa15.31■□□□□ 0.04
CHMP1A-208ENST00000550102 COQ5Q5HYK3 327 aa15.31■□□□□ 0.04
CHMP1A-208ENST00000550102 BHLHE22Q8NFJ8 381 aaPredicted RBP15.31■□□□□ 0.04
CHMP1A-208ENST00000550102 OR10A4Q9H209 315 aa15.31■□□□□ 0.04
CHMP1A-208ENST00000550102 CAPN7Q9Y6W3 813 aa15.31■□□□□ 0.04
CHMP1A-208ENST00000550102 FBP2O00757 339 aa15.3■□□□□ 0.04
CHMP1A-208ENST00000550102 DNAJA1P31689 397 aaKnown RBP15.3■□□□□ 0.04
CHMP1A-208ENST00000550102 SELPLGQ14242 412 aa15.3■□□□□ 0.04
CHMP1A-208ENST00000550102 CAPRIN1Q14444 709 aaKnown RBP15.3■□□□□ 0.04
CHMP1A-208ENST00000550102 MMEL1Q495T6 779 aa15.3■□□□□ 0.04
CHMP1A-208ENST00000550102 ANKRD34AQ69YU3 496 aa15.3■□□□□ 0.04
CHMP1A-208ENST00000550102 NET1Q7Z628 596 aaPredicted RBP15.3■□□□□ 0.04
CHMP1A-208ENST00000550102 GALNT5Q7Z7M9 940 aa15.3■□□□□ 0.04
CHMP1A-208ENST00000550102 CXorf67Q86X51 503 aaPredicted RBP15.3■□□□□ 0.04
CHMP1A-208ENST00000550102 PTOV1Q86YD1 416 aa15.3■□□□□ 0.04
CHMP1A-208ENST00000550102 ARMC8Q8IUR7 673 aa15.3■□□□□ 0.04
CHMP1A-208ENST00000550102 SLC30A8Q8IWU4 369 aa15.3■□□□□ 0.04
CHMP1A-208ENST00000550102 GABRG1Q8N1C3 465 aa15.3■□□□□ 0.04
CHMP1A-208ENST00000550102 STEAP2Q8NFT2 490 aa15.3■□□□□ 0.04
CHMP1A-208ENST00000550102 C3orf49Q96BT1 292 aa15.3■□□□□ 0.04
CHMP1A-208ENST00000550102 ZC3HAV1LQ96H79 300 aaKnown RBP15.3■□□□□ 0.04
CHMP1A-208ENST00000550102 ZNF317Q96PQ6 595 aaPredicted RBP15.3■□□□□ 0.04
CHMP1A-208ENST00000550102 NAA11Q9BSU3 229 aaPredicted RBP15.3■□□□□ 0.04
CHMP1A-208ENST00000550102 POTEKPQ9BYX7 375 aa15.3■□□□□ 0.04
CHMP1A-208ENST00000550102 ACTR6Q9GZN1 396 aa15.3■□□□□ 0.04
CHMP1A-208ENST00000550102 KAT8Q9H7Z6 458 aaKnown RBP15.3■□□□□ 0.04
CHMP1A-208ENST00000550102 RPS6KB2Q9UBS0 482 aa15.3■□□□□ 0.04
CHMP1A-208ENST00000550102 TESQ9UGI8 421 aaKnown RBP15.3■□□□□ 0.04
CHMP1A-208ENST00000550102 ST6GALNAC2Q9UJ37 374 aa15.3■□□□□ 0.04
CHMP1A-208ENST00000550102 SLC13A4Q9UKG4 626 aa15.3■□□□□ 0.04
CHMP1A-208ENST00000550102 ITGB1BP2Q9UKP3 347 aa15.3■□□□□ 0.04
CHMP1A-208ENST00000550102 GPR52Q9Y2T5 361 aa15.3■□□□□ 0.04
CHMP1A-208ENST00000550102 F8P00451 2351 aa15.29■□□□□ 0.04
CHMP1A-208ENST00000550102 PRR14LQ5THK1 2151 aa15.29■□□□□ 0.04
CHMP1A-208ENST00000550102 AKAP9Q99996 3911 aa15.29■□□□□ 0.04
CHMP1A-208ENST00000550102 ZNF716A6NP11 495 aa15.29■□□□□ 0.04
CHMP1A-208ENST00000550102 A8MVM7 634 aa15.29■□□□□ 0.04
CHMP1A-208ENST00000550102 TMEM229AB2RXF0 380 aa15.29■□□□□ 0.04
CHMP1A-208ENST00000550102 GPR171O14626 319 aa15.29■□□□□ 0.04
CHMP1A-208ENST00000550102 MRASO14807 208 aa15.29■□□□□ 0.04
CHMP1A-208ENST00000550102 SLC22A2O15244 555 aa15.29■□□□□ 0.04
CHMP1A-208ENST00000550102 GCM2O75603 506 aaPredicted RBP15.29■□□□□ 0.04
CHMP1A-208ENST00000550102 GPIP06744 558 aa15.29■□□□□ 0.04
CHMP1A-208ENST00000550102 IMPDH2P12268 514 aa15.29■□□□□ 0.04
CHMP1A-208ENST00000550102 FPR1P21462 350 aa15.29■□□□□ 0.04
CHMP1A-208ENST00000550102 IL32P24001 234 aa15.29■□□□□ 0.04
CHMP1A-208ENST00000550102 ADSLP30566 484 aaPredicted RBP15.29■□□□□ 0.04
CHMP1A-208ENST00000550102 PCGF2P35227 344 aa15.29■□□□□ 0.04
CHMP1A-208ENST00000550102 SLC16A1P53985 500 aa15.29■□□□□ 0.04
CHMP1A-208ENST00000550102 PCBP3P57721 371 aaKnown RBP15.29■□□□□ 0.04
CHMP1A-208ENST00000550102 RGS8P57771 180 aaPredicted RBP15.29■□□□□ 0.04
CHMP1A-208ENST00000550102 H3F3AP84243 136 aa15.29■□□□□ 0.04
CHMP1A-208ENST00000550102 HOXC5Q00444 222 aa15.29■□□□□ 0.04
CHMP1A-208ENST00000550102 CYLC2Q14093 348 aaPredicted RBP15.29■□□□□ 0.04
CHMP1A-208ENST00000550102 P2RY6Q15077 328 aa15.29■□□□□ 0.04
CHMP1A-208ENST00000550102 REP15Q6BDI9 236 aa15.29■□□□□ 0.04
CHMP1A-208ENST00000550102 PAQR6Q6TCH4 344 aa15.29■□□□□ 0.04
CHMP1A-208ENST00000550102 PAMR1Q6UXH9 720 aa15.29■□□□□ 0.04
CHMP1A-208ENST00000550102 ATG4DQ86TL0 474 aaPredicted RBP15.29■□□□□ 0.04
CHMP1A-208ENST00000550102 COMTD1Q86VU5 262 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms