RNA–Protein interactions for RNA: ENST00000548132.1

GCN1-204, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-204ENST00000548132 VRK2Q86Y07 508 aa10.97□□□□□ -0.65
GCN1-204ENST00000548132 P3H2Q8IVL5 708 aa10.97□□□□□ -0.65
GCN1-204ENST00000548132 ARFGAP2Q8N6H7 521 aa10.97□□□□□ -0.65
GCN1-204ENST00000548132 GLB1L3Q8NCI6 653 aaPredicted RBP10.97□□□□□ -0.65
GCN1-204ENST00000548132 VPS37AQ8NEZ2 397 aa10.97□□□□□ -0.65
GCN1-204ENST00000548132 ARL8AQ96BM9 186 aa10.97□□□□□ -0.65
GCN1-204ENST00000548132 PAIP1Q9H074 479 aaKnown RBP10.97□□□□□ -0.65
GCN1-204ENST00000548132 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.97□□□□□ -0.65
GCN1-204ENST00000548132 RLIMQ9NVW2 624 aa10.97□□□□□ -0.65
GCN1-204ENST00000548132 ZIM2Q9NZV7 527 aa10.97□□□□□ -0.65
GCN1-204ENST00000548132 TMED7Q9Y3B3 224 aa10.97□□□□□ -0.65
GCN1-204ENST00000548132 HDGFL3Q9Y3E1 203 aa10.97□□□□□ -0.65
GCN1-204ENST00000548132 FLVCR1Q9Y5Y0 555 aa10.97□□□□□ -0.65
GCN1-204ENST00000548132 FBN1P35555 2871 aaKnown RBP10.97□□□□□ -0.65
GCN1-204ENST00000548132 COL6A5A8TX70 2615 aa10.96□□□□□ -0.65
GCN1-204ENST00000548132 OR5H1A6NKK0 313 aa10.96□□□□□ -0.65
GCN1-204ENST00000548132 TRPC5OSA6NMA1 111 aa10.96□□□□□ -0.65
GCN1-204ENST00000548132 TMEM229AB2RXF0 380 aa10.96□□□□□ -0.65
GCN1-204ENST00000548132 RFXANKO14593 260 aa10.96□□□□□ -0.65
GCN1-204ENST00000548132 CLOCKO15516 846 aa10.96□□□□□ -0.65
GCN1-204ENST00000548132 ARHGEF9O43307 516 aa10.96□□□□□ -0.65
GCN1-204ENST00000548132 FRS3O43559 492 aa10.96□□□□□ -0.65
GCN1-204ENST00000548132 FZD7O75084 574 aa10.96□□□□□ -0.65
GCN1-204ENST00000548132 RAD51DO75771 328 aa10.96□□□□□ -0.65
GCN1-204ENST00000548132 CNOT4O95628 575 aaKnown RBP10.96□□□□□ -0.65
GCN1-204ENST00000548132 CD8AP01732 235 aa10.96□□□□□ -0.65
GCN1-204ENST00000548132 BCHEP06276 602 aa10.96□□□□□ -0.65
GCN1-204ENST00000548132 TFPTP0C1Z6 253 aa10.96□□□□□ -0.65
GCN1-204ENST00000548132 ZCCHC18P0CG32 403 aa10.96□□□□□ -0.65
GCN1-204ENST00000548132 CCNA2P20248 432 aa10.96□□□□□ -0.65
GCN1-204ENST00000548132 TACR3P29371 465 aa10.96□□□□□ -0.65
GCN1-204ENST00000548132 MRPL19P49406 292 aaKnown RBP10.96□□□□□ -0.65
GCN1-204ENST00000548132 TXNL4AP83876 142 aaKnown RBP10.96□□□□□ -0.65
GCN1-204ENST00000548132 RNF220Q5VTB9 566 aa10.96□□□□□ -0.65
GCN1-204ENST00000548132 ALKBH2Q6NS38 261 aa10.96□□□□□ -0.65
GCN1-204ENST00000548132 MSANTD1Q6ZTZ1 278 aa10.96□□□□□ -0.65
GCN1-204ENST00000548132 CROCCP2Q86T23 111 aa10.96□□□□□ -0.65
GCN1-204ENST00000548132 DTX2Q86UW9 622 aa10.96□□□□□ -0.65
GCN1-204ENST00000548132 ZNF563Q8TA94 476 aa10.96□□□□□ -0.65
GCN1-204ENST00000548132 PIGXQ8TBF5 258 aa10.96□□□□□ -0.65
GCN1-204ENST00000548132 TMEM171Q8WVE6 324 aa10.96□□□□□ -0.65
GCN1-204ENST00000548132 GTF2H4Q92759 462 aa10.96□□□□□ -0.65
GCN1-204ENST00000548132 FBXW5Q969U6 566 aa10.96□□□□□ -0.65
GCN1-204ENST00000548132 TMEM19Q96HH6 336 aa10.96□□□□□ -0.65
GCN1-204ENST00000548132 ADAM19Q9H013 955 aa10.96□□□□□ -0.65
GCN1-204ENST00000548132 FANCFQ9NPI8 374 aa10.96□□□□□ -0.65
GCN1-204ENST00000548132 SLC52A3Q9NQ40 469 aa10.96□□□□□ -0.65
GCN1-204ENST00000548132 SLC25A37Q9NYZ2 338 aa10.96□□□□□ -0.65
GCN1-204ENST00000548132 LAMP3Q9UQV4 416 aa10.96□□□□□ -0.65
GCN1-204ENST00000548132 LIPT1Q9Y234 373 aa10.96□□□□□ -0.65
GCN1-204ENST00000548132 ZNF443Q9Y2A4 671 aaPredicted RBP10.96□□□□□ -0.65
GCN1-204ENST00000548132 SLC25A15Q9Y619 301 aa10.96□□□□□ -0.65
GCN1-204ENST00000548132 HEATR1Q9H583 2144 aaKnown RBP10.96□□□□□ -0.66
GCN1-204ENST00000548132 STAB1Q9NY15 2570 aa10.95□□□□□ -0.66
GCN1-204ENST00000548132 TRBV5-3A0A0A0MS03 114 aa10.95□□□□□ -0.66
GCN1-204ENST00000548132 SMAD7O15105 426 aaKnown RBP10.95□□□□□ -0.66
GCN1-204ENST00000548132 ZNF208O43345 1280 aa10.95□□□□□ -0.66
GCN1-204ENST00000548132 TMCC2O75069 709 aa10.95□□□□□ -0.66
GCN1-204ENST00000548132 NPIPB7O75200 414 aa10.95□□□□□ -0.66
GCN1-204ENST00000548132 NDUFS7O75251 213 aa10.95□□□□□ -0.66
GCN1-204ENST00000548132 SLC22A3O75751 556 aa10.95□□□□□ -0.66
GCN1-204ENST00000548132 IGHV4-39P01824 125 aa10.95□□□□□ -0.66
GCN1-204ENST00000548132 DBIP07108 87 aaKnown RBP10.95□□□□□ -0.66
GCN1-204ENST00000548132 CD3EP07766 207 aa10.95□□□□□ -0.66
GCN1-204ENST00000548132 GKN3PP0CG01 181 aa10.95□□□□□ -0.66
GCN1-204ENST00000548132 TFPIP10646 304 aa10.95□□□□□ -0.66
GCN1-204ENST00000548132 BMP2P12643 396 aa10.95□□□□□ -0.66
GCN1-204ENST00000548132 CDKN1AP38936 164 aa10.95□□□□□ -0.66
GCN1-204ENST00000548132 SLC1A3P43003 542 aa10.95□□□□□ -0.66
GCN1-204ENST00000548132 POLR2HP52434 150 aaKnown RBP10.95□□□□□ -0.66
GCN1-204ENST00000548132 RPS4XP62701 263 aaKnown RBP10.95□□□□□ -0.66
GCN1-204ENST00000548132 SLC17A1Q14916 467 aa10.95□□□□□ -0.66
GCN1-204ENST00000548132 PPA1Q15181 289 aa10.95□□□□□ -0.66
GCN1-204ENST00000548132 STK11Q15831 433 aa10.95□□□□□ -0.66
GCN1-204ENST00000548132 TTMPQ5BVD1 217 aa10.95□□□□□ -0.66
GCN1-204ENST00000548132 TIMM23BQ5SRD1 257 aa10.95□□□□□ -0.66
GCN1-204ENST00000548132 FBXW9Q5XUX1 488 aa10.95□□□□□ -0.66
GCN1-204ENST00000548132 C11orf71Q6IPW1 123 aa10.95□□□□□ -0.66
GCN1-204ENST00000548132 SLC2A7Q6PXP3 512 aa10.95□□□□□ -0.66
GCN1-204ENST00000548132 ZNF621Q6ZSS3 439 aa10.95□□□□□ -0.66
GCN1-204ENST00000548132 FUNDC1Q8IVP5 155 aa10.95□□□□□ -0.66
GCN1-204ENST00000548132 CLIP4Q8N3C7 705 aa10.95□□□□□ -0.66
GCN1-204ENST00000548132 TRIML2Q8N7C3 387 aa10.95□□□□□ -0.66
GCN1-204ENST00000548132 ZIC4Q8N9L1 334 aa10.95□□□□□ -0.66
GCN1-204ENST00000548132 OR52E4Q8NGH9 312 aa10.95□□□□□ -0.66
GCN1-204ENST00000548132 SLC38A5Q8WUX1 472 aa10.95□□□□□ -0.66
GCN1-204ENST00000548132 HSD17B8Q92506 261 aa10.95□□□□□ -0.66
GCN1-204ENST00000548132 EBF4Q9BQW3 602 aa10.95□□□□□ -0.66
GCN1-204ENST00000548132 TRAF4Q9BUZ4 470 aaPredicted RBP10.95□□□□□ -0.66
GCN1-204ENST00000548132 HDHD5Q9BXW7 423 aa10.95□□□□□ -0.66
GCN1-204ENST00000548132 IKZF5Q9H5V7 419 aa10.95□□□□□ -0.66
GCN1-204ENST00000548132 MANSC1Q9H8J5 431 aa10.95□□□□□ -0.66
GCN1-204ENST00000548132 TPT1P8Q9HAU6 139 aa10.95□□□□□ -0.66
GCN1-204ENST00000548132 SLCO1B3Q9NPD5 702 aa10.95□□□□□ -0.66
GCN1-204ENST00000548132 SERINC1Q9NRX5 453 aa10.95□□□□□ -0.66
GCN1-204ENST00000548132 EMC3Q9P0I2 261 aa10.95□□□□□ -0.66
GCN1-204ENST00000548132 TMEM181Q9P2C4 612 aa10.95□□□□□ -0.66
GCN1-204ENST00000548132 P2RX2Q9UBL9 471 aa10.95□□□□□ -0.66
GCN1-204ENST00000548132 SPIN1Q9Y657 262 aaPredicted RBP10.95□□□□□ -0.66
GCN1-204ENST00000548132 USH1CQ9Y6N9 552 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms