RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 GMPR2Q9P2T1 348 aaKnown RBP12.96□□□□□ -0.33
DDX54-203ENST00000546869 BAHCC1Q9P281 2608 aa12.95□□□□□ -0.34
DDX54-203ENST00000546869 DIDO1Q9BTC0 2240 aaKnown RBP12.95□□□□□ -0.34
DDX54-203ENST00000546869 A0A1B0GWA3 101 aa12.95□□□□□ -0.34
DDX54-203ENST00000546869 SULT2B1O00204 365 aa12.95□□□□□ -0.34
DDX54-203ENST00000546869 EIF1BO60739 113 aaKnown RBP12.95□□□□□ -0.34
DDX54-203ENST00000546869 FZD7O75084 574 aa12.95□□□□□ -0.34
DDX54-203ENST00000546869 AQP8O94778 261 aa12.95□□□□□ -0.34
DDX54-203ENST00000546869 CLDN1O95832 211 aa12.95□□□□□ -0.34
DDX54-203ENST00000546869 NCALDP61601 193 aa12.95□□□□□ -0.34
DDX54-203ENST00000546869 MXRA7P84157 204 aa12.95□□□□□ -0.34
DDX54-203ENST00000546869 H3F3AP84243 136 aa12.95□□□□□ -0.34
DDX54-203ENST00000546869 MYBPHQ13203 477 aa12.95□□□□□ -0.34
DDX54-203ENST00000546869 PDK3Q15120 406 aa12.95□□□□□ -0.34
DDX54-203ENST00000546869 RNPS1Q15287 305 aaKnown RBP12.95□□□□□ -0.34
DDX54-203ENST00000546869 CDSNQ15517 529 aa12.95□□□□□ -0.34
DDX54-203ENST00000546869 NPTX1Q15818 432 aa12.95□□□□□ -0.34
DDX54-203ENST00000546869 GLYATQ6IB77 296 aa12.95□□□□□ -0.34
DDX54-203ENST00000546869 LINC00114Q6XXX2 140 aa12.95□□□□□ -0.34
DDX54-203ENST00000546869 LIX1LQ8IVB5 337 aa12.95□□□□□ -0.34
DDX54-203ENST00000546869 RNF128Q8TEB7 428 aa12.95□□□□□ -0.34
DDX54-203ENST00000546869 ARL5BQ96KC2 179 aa12.95□□□□□ -0.34
DDX54-203ENST00000546869 MCHR1Q99705 422 aa12.95□□□□□ -0.34
DDX54-203ENST00000546869 SRXN1Q9BYN0 137 aa12.95□□□□□ -0.34
DDX54-203ENST00000546869 PRRG4Q9BZD6 226 aa12.95□□□□□ -0.34
DDX54-203ENST00000546869 PIGMQ9H3S5 423 aa12.95□□□□□ -0.34
DDX54-203ENST00000546869 CHST11Q9NPF2 352 aa12.95□□□□□ -0.34
DDX54-203ENST00000546869 KCNJ16Q9NPI9 418 aa12.95□□□□□ -0.34
DDX54-203ENST00000546869 JKAMPQ9P055 326 aa12.95□□□□□ -0.34
DDX54-203ENST00000546869 USP9YO00507 2555 aaPredicted RBP12.94□□□□□ -0.34
DDX54-203ENST00000546869 A0A087WUJ7 227 aa12.94□□□□□ -0.34
DDX54-203ENST00000546869 A0A1W2PNR3 127 aa12.94□□□□□ -0.34
DDX54-203ENST00000546869 A0A1W2PNV4 684 aa12.94□□□□□ -0.34
DDX54-203ENST00000546869 M0R3H8 397 aa12.94□□□□□ -0.34
DDX54-203ENST00000546869 SS18L1O75177 396 aaPredicted RBP12.94□□□□□ -0.34
DDX54-203ENST00000546869 GMNNO75496 209 aa12.94□□□□□ -0.34
DDX54-203ENST00000546869 TNFSF13O75888 250 aa12.94□□□□□ -0.34
DDX54-203ENST00000546869 PRKD3O94806 890 aa12.94□□□□□ -0.34
DDX54-203ENST00000546869 TFPIP10646 304 aa12.94□□□□□ -0.34
DDX54-203ENST00000546869 ENPP1P22413 925 aa12.94□□□□□ -0.34
DDX54-203ENST00000546869 KIR2DL2P43627 348 aaPredicted RBP12.94□□□□□ -0.34
DDX54-203ENST00000546869 PCYT1AP49585 367 aa12.94□□□□□ -0.34
DDX54-203ENST00000546869 SLC35A1P78382 337 aa12.94□□□□□ -0.34
DDX54-203ENST00000546869 TFF3Q07654 80 aa12.94□□□□□ -0.34
DDX54-203ENST00000546869 FOXF2Q12947 444 aa12.94□□□□□ -0.34
DDX54-203ENST00000546869 FBXL19-AS1Q494R0 122 aa12.94□□□□□ -0.34
DDX54-203ENST00000546869 LRRC23Q53EV4 343 aaPredicted RBP12.94□□□□□ -0.34
DDX54-203ENST00000546869 ALG10BQ5I7T1 473 aa12.94□□□□□ -0.34
DDX54-203ENST00000546869 ENTPD8Q5MY95 495 aa12.94□□□□□ -0.34
DDX54-203ENST00000546869 FCRLAQ7L513 359 aa12.94□□□□□ -0.34
DDX54-203ENST00000546869 FAM214BQ7L5A3 538 aa12.94□□□□□ -0.34
DDX54-203ENST00000546869 ACBD4Q8NC06 268 aa12.94□□□□□ -0.34
DDX54-203ENST00000546869 OR4D11Q8NGI4 311 aa12.94□□□□□ -0.34
DDX54-203ENST00000546869 OR6S1Q8NH40 331 aa12.94□□□□□ -0.34
DDX54-203ENST00000546869 INTS12Q96CB8 462 aaKnown RBP12.94□□□□□ -0.34
DDX54-203ENST00000546869 TACO1Q9BSH4 297 aaKnown RBP12.94□□□□□ -0.34
DDX54-203ENST00000546869 OR11A1Q9GZK7 315 aa12.94□□□□□ -0.34
DDX54-203ENST00000546869 DCAF13Q9NV06 445 aaKnown RBP12.94□□□□□ -0.34
DDX54-203ENST00000546869 TAS2R1Q9NYW7 299 aa12.94□□□□□ -0.34
DDX54-203ENST00000546869 SELENONQ9NZV5 590 aa12.94□□□□□ -0.34
DDX54-203ENST00000546869 MAGEL2Q9UJ55 1249 aa12.94□□□□□ -0.34
DDX54-203ENST00000546869 RPS6KA6Q9UK32 745 aa12.94□□□□□ -0.34
DDX54-203ENST00000546869 SH3GLB1Q9Y371 365 aa12.94□□□□□ -0.34
DDX54-203ENST00000546869 TRAPPC13A5PLN9 417 aa12.93□□□□□ -0.34
DDX54-203ENST00000546869 ELOA3DA6NLF2 546 aaPredicted RBP12.93□□□□□ -0.34
DDX54-203ENST00000546869 CHP2O43745 196 aa12.93□□□□□ -0.34
DDX54-203ENST00000546869 OR2T1O43869 369 aa12.93□□□□□ -0.34
DDX54-203ENST00000546869 CYTIPO60759 359 aa12.93□□□□□ -0.34
DDX54-203ENST00000546869 GPIP06744 558 aa12.93□□□□□ -0.34
DDX54-203ENST00000546869 THRBP10828 461 aa12.93□□□□□ -0.34
DDX54-203ENST00000546869 IMPDH2P12268 514 aa12.93□□□□□ -0.34
DDX54-203ENST00000546869 CCNA2P20248 432 aa12.93□□□□□ -0.34
DDX54-203ENST00000546869 CDH12P55289 794 aa12.93□□□□□ -0.34
DDX54-203ENST00000546869 EGR4Q05215 589 aa12.93□□□□□ -0.34
DDX54-203ENST00000546869 CEACAM7Q14002 265 aa12.93□□□□□ -0.34
DDX54-203ENST00000546869 ELOA3BQ3SY89 546 aa12.93□□□□□ -0.34
DDX54-203ENST00000546869 C1orf140Q5VVS0 124 aa12.93□□□□□ -0.34
DDX54-203ENST00000546869 PLXDC2Q6UX71 529 aa12.93□□□□□ -0.34
DDX54-203ENST00000546869 RINLQ6ZS11 566 aa12.93□□□□□ -0.34
DDX54-203ENST00000546869 CARM1Q86X55 608 aa12.93□□□□□ -0.34
DDX54-203ENST00000546869 RBM45Q8IUH3 476 aaKnown RBP12.93□□□□□ -0.34
DDX54-203ENST00000546869 ELOA3Q8NG57 546 aa12.93□□□□□ -0.34
DDX54-203ENST00000546869 MFSD8Q8NHS3 518 aa12.93□□□□□ -0.34
DDX54-203ENST00000546869 ADAMTS16Q8TE57 1224 aa12.93□□□□□ -0.34
DDX54-203ENST00000546869 ROBO4Q8WZ75 1007 aa12.93□□□□□ -0.34
DDX54-203ENST00000546869 STARD4Q96DR4 205 aa12.93□□□□□ -0.34
DDX54-203ENST00000546869 ZHX1-C8orf76Q96EF9 292 aa12.93□□□□□ -0.34
DDX54-203ENST00000546869 MPP4Q96JB8 637 aa12.93□□□□□ -0.34
DDX54-203ENST00000546869 TMEM43Q9BTV4 400 aa12.93□□□□□ -0.34
DDX54-203ENST00000546869 PRR14Q9BWN1 585 aa12.93□□□□□ -0.34
DDX54-203ENST00000546869 BCO1Q9HAY6 547 aa12.93□□□□□ -0.34
DDX54-203ENST00000546869 PLSCR4Q9NRQ2 329 aa12.93□□□□□ -0.34
DDX54-203ENST00000546869 PLEKHB1Q9UF11 243 aaPredicted RBP12.93□□□□□ -0.34
DDX54-203ENST00000546869 FOXD3Q9UJU5 478 aaPredicted RBP12.93□□□□□ -0.34
DDX54-203ENST00000546869 PRPF19Q9UMS4 504 aaKnown RBP12.93□□□□□ -0.34
DDX54-203ENST00000546869 ARHGAP21Q5T5U3 1957 aa12.92□□□□□ -0.34
DDX54-203ENST00000546869 ZC3H12DA2A288 527 aaKnown RBP12.92□□□□□ -0.34
DDX54-203ENST00000546869 LIPT2A6NK58 231 aa12.92□□□□□ -0.34
DDX54-203ENST00000546869 ZNF724A8MTY0 619 aa12.92□□□□□ -0.34
DDX54-203ENST00000546869 SMAD9O15198 467 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms