RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 RASD1Q9Y272 281 aa2.06□□□□□ -2.08
CCDC38-204ENST00000546816 GSTK1Q9Y2Q3 226 aa2.06□□□□□ -2.08
CCDC38-204ENST00000546816 ALG6Q9Y672 507 aa2.06□□□□□ -2.08
CCDC38-204ENST00000546816 LRP4O75096 1905 aa2.06□□□□□ -2.08
CCDC38-204ENST00000546816 A0A1B0GUL7 405 aa2.05□□□□□ -2.08
CCDC38-204ENST00000546816 MOSP00540 346 aa2.05□□□□□ -2.08
CCDC38-204ENST00000546816 PNMA6AP0CW24 399 aaPredicted RBP2.05□□□□□ -2.08
CCDC38-204ENST00000546816 ICAM2P13598 275 aa2.05□□□□□ -2.08
CCDC38-204ENST00000546816 RFC4P35249 363 aa2.05□□□□□ -2.08
CCDC38-204ENST00000546816 RABIFP47224 123 aa2.05□□□□□ -2.08
CCDC38-204ENST00000546816 SELENOTP62341 195 aa2.05□□□□□ -2.08
CCDC38-204ENST00000546816 NRF1Q16656 503 aa2.05□□□□□ -2.08
CCDC38-204ENST00000546816 MAPK6Q16659 721 aa2.05□□□□□ -2.08
CCDC38-204ENST00000546816 TMEM41BQ5BJD5 291 aa2.05□□□□□ -2.08
CCDC38-204ENST00000546816 KPRPQ5T749 579 aaPredicted RBP2.05□□□□□ -2.08
CCDC38-204ENST00000546816 C6orf89Q6UWU4 347 aa2.05□□□□□ -2.08
CCDC38-204ENST00000546816 DPY19L4Q7Z388 723 aa2.05□□□□□ -2.08
CCDC38-204ENST00000546816 ZNF619Q8N2I2 560 aa2.05□□□□□ -2.08
CCDC38-204ENST00000546816 KIR3DL3Q8N743 410 aa2.05□□□□□ -2.08
CCDC38-204ENST00000546816 SLC22A8Q8TCC7 542 aa2.05□□□□□ -2.08
CCDC38-204ENST00000546816 KCNA7Q96RP8 456 aa2.05□□□□□ -2.08
CCDC38-204ENST00000546816 NIPSNAP3BQ9BS92 247 aa2.05□□□□□ -2.08
CCDC38-204ENST00000546816 GPR61Q9BZJ8 451 aa2.05□□□□□ -2.08
CCDC38-204ENST00000546816 RHOJQ9H4E5 214 aa2.05□□□□□ -2.08
CCDC38-204ENST00000546816 CALHM2Q9HA72 323 aa2.05□□□□□ -2.08
CCDC38-204ENST00000546816 ZNF835Q9Y2P0 537 aa2.05□□□□□ -2.08
CCDC38-204ENST00000546816 CLCA3PQ9Y6N3 262 aa2.05□□□□□ -2.08
CCDC38-204ENST00000546816 U3KQV3 271 aa2.05□□□□□ -2.08
CCDC38-204ENST00000546816 MAP3K15Q6ZN16 1313 aa2.05□□□□□ -2.08
CCDC38-204ENST00000546816 CLSPNQ9HAW4 1339 aa2.05□□□□□ -2.08
CCDC38-204ENST00000546816 IGHV1OR21-1A0A087WYE8 117 aa2.04□□□□□ -2.08
CCDC38-204ENST00000546816 PRPSAP2O60256 369 aa2.04□□□□□ -2.08
CCDC38-204ENST00000546816 LGI1O95970 557 aa2.04□□□□□ -2.08
CCDC38-204ENST00000546816 IGLV3-19P01714 112 aa2.04□□□□□ -2.08
CCDC38-204ENST00000546816 LGALS2P05162 132 aa2.04□□□□□ -2.08
CCDC38-204ENST00000546816 ZNF286BP0CG31 522 aa2.04□□□□□ -2.08
CCDC38-204ENST00000546816 TDGF1P13385 188 aa2.04□□□□□ -2.08
CCDC38-204ENST00000546816 GAP43P17677 238 aa2.04□□□□□ -2.08
CCDC38-204ENST00000546816 CMA1P23946 247 aa2.04□□□□□ -2.08
CCDC38-204ENST00000546816 ANXA13P27216 316 aa2.04□□□□□ -2.08
CCDC38-204ENST00000546816 FGF9P31371 208 aaPredicted RBP2.04□□□□□ -2.08
CCDC38-204ENST00000546816 TDGF1P3P51864 188 aa2.04□□□□□ -2.08
CCDC38-204ENST00000546816 CRISP3P54108 245 aa2.04□□□□□ -2.08
CCDC38-204ENST00000546816 DLX1P56177 255 aa2.04□□□□□ -2.08
CCDC38-204ENST00000546816 ACTA1P68133 377 aa2.04□□□□□ -2.08
CCDC38-204ENST00000546816 CNTN2Q02246 1040 aa2.04□□□□□ -2.08
CCDC38-204ENST00000546816 MESDQ14696 234 aa2.04□□□□□ -2.08
CCDC38-204ENST00000546816 CEBPEQ15744 281 aa2.04□□□□□ -2.08
CCDC38-204ENST00000546816 TATDN3Q17R31 274 aa2.04□□□□□ -2.08
CCDC38-204ENST00000546816 C12orf60Q5U649 245 aa2.04□□□□□ -2.08
CCDC38-204ENST00000546816 ZSCAN25Q6NSZ9 544 aa2.04□□□□□ -2.08
CCDC38-204ENST00000546816 NPBQ8NG41 125 aa2.04□□□□□ -2.08
CCDC38-204ENST00000546816 OR56B4Q8NH76 319 aa2.04□□□□□ -2.08
CCDC38-204ENST00000546816 HTR3CQ8WXA8 447 aa2.04□□□□□ -2.08
CCDC38-204ENST00000546816 ST8SIA1Q92185 356 aa2.04□□□□□ -2.08
CCDC38-204ENST00000546816 SEC22AQ96IW7 307 aa2.04□□□□□ -2.08
CCDC38-204ENST00000546816 C7orf34Q96L11 122 aa2.04□□□□□ -2.08
CCDC38-204ENST00000546816 C12orf66Q96MD2 445 aa2.04□□□□□ -2.08
CCDC38-204ENST00000546816 ZNF670Q9BS34 389 aa2.04□□□□□ -2.08
CCDC38-204ENST00000546816 TUBGCP2Q9BSJ2 902 aa2.04□□□□□ -2.08
CCDC38-204ENST00000546816 SPATA16Q9BXB7 569 aa2.04□□□□□ -2.08
CCDC38-204ENST00000546816 ING2Q9H160 280 aa2.04□□□□□ -2.08
CCDC38-204ENST00000546816 RHBGQ9H310 441 aa2.04□□□□□ -2.08
CCDC38-204ENST00000546816 INPP5EQ9NRR6 644 aa2.04□□□□□ -2.08
CCDC38-204ENST00000546816 SMPD3Q9NY59 655 aaPredicted RBP2.04□□□□□ -2.08
CCDC38-204ENST00000546816 WIF1Q9Y5W5 379 aa2.04□□□□□ -2.08
CCDC38-204ENST00000546816 V9GY05 133 aa2.04□□□□□ -2.08
CCDC38-204ENST00000546816 KRT87PA6NCN2 255 aa2.03□□□□□ -2.08
CCDC38-204ENST00000546816 C11orf94C9JXX5 98 aa2.03□□□□□ -2.08
CCDC38-204ENST00000546816 LAD1O00515 517 aa2.03□□□□□ -2.08
CCDC38-204ENST00000546816 CXCL13O43927 109 aa2.03□□□□□ -2.08
CCDC38-204ENST00000546816 P04436 131 aa2.03□□□□□ -2.08
CCDC38-204ENST00000546816 CHTF8P0CG12 524 aa2.03□□□□□ -2.08
CCDC38-204ENST00000546816 MAPK3P27361 379 aaPredicted RBP2.03□□□□□ -2.08
CCDC38-204ENST00000546816 HOXA9P31269 272 aa2.03□□□□□ -2.08
CCDC38-204ENST00000546816 LEPP41159 167 aa2.03□□□□□ -2.08
CCDC38-204ENST00000546816 PTGDSP41222 190 aa2.03□□□□□ -2.08
CCDC38-204ENST00000546816 DAP3P51398 398 aaKnown RBP2.03□□□□□ -2.08
CCDC38-204ENST00000546816 EWSR1Q01844 656 aaKnown RBP eCLIP2.03□□□□□ -2.08
CCDC38-204ENST00000546816 ZNF763Q0D2J5 394 aa2.03□□□□□ -2.08
CCDC38-204ENST00000546816 DEFB116Q30KQ4 102 aa2.03□□□□□ -2.08
CCDC38-204ENST00000546816 KRTAP13-1Q8IUC0 172 aa2.03□□□□□ -2.08
CCDC38-204ENST00000546816 OR6C4Q8NGE1 309 aa2.03□□□□□ -2.08
CCDC38-204ENST00000546816 OR10G9Q8NGN4 311 aa2.03□□□□□ -2.08
CCDC38-204ENST00000546816 SPRYD4Q8WW59 207 aaPredicted RBP2.03□□□□□ -2.08
CCDC38-204ENST00000546816 GIMAP1Q8WWP7 306 aa2.03□□□□□ -2.08
CCDC38-204ENST00000546816 STARD8Q92502 1023 aa2.03□□□□□ -2.08
CCDC38-204ENST00000546816 EXOSC8Q96B26 276 aaKnown RBP2.03□□□□□ -2.08
CCDC38-204ENST00000546816 CEP170P1Q96L14 293 aa2.03□□□□□ -2.08
CCDC38-204ENST00000546816 P2RY13Q9BPV8 354 aa2.03□□□□□ -2.08
CCDC38-204ENST00000546816 C20orf85Q9H1P6 137 aa2.03□□□□□ -2.08
CCDC38-204ENST00000546816 FOLH1BQ9HBA9 442 aa2.03□□□□□ -2.08
CCDC38-204ENST00000546816 LHX9Q9NQ69 397 aa2.03□□□□□ -2.08
CCDC38-204ENST00000546816 KDRP35968 1356 aa2.02□□□□□ -2.09
CCDC38-204ENST00000546816 GPRASP1Q5JY77 1395 aa2.02□□□□□ -2.09
CCDC38-204ENST00000546816 A0A087WZY1 265 aa2.02□□□□□ -2.09
CCDC38-204ENST00000546816 A0A0G2JN53 185 aa2.02□□□□□ -2.09
CCDC38-204ENST00000546816 E9PBE3 544 aa2.02□□□□□ -2.09
CCDC38-204ENST00000546816 RS1O15537 224 aa2.02□□□□□ -2.09
CCDC38-204ENST00000546816 TRIM16O95361 564 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms