RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 CCKARP32238 428 aa10.57□□□□□ -0.72
YBX3-217ENST00000546164 UGT2B10P36537 528 aa10.57□□□□□ -0.72
YBX3-217ENST00000546164 H3F3AP84243 136 aa10.57□□□□□ -0.72
YBX3-217ENST00000546164 CYLC2Q14093 348 aaPredicted RBP10.57□□□□□ -0.72
YBX3-217ENST00000546164 SELPLGQ14242 412 aa10.57□□□□□ -0.72
YBX3-217ENST00000546164 CYP51A1Q16850 503 aa10.57□□□□□ -0.72
YBX3-217ENST00000546164 ABLIM2Q6H8Q1 611 aa10.57□□□□□ -0.72
YBX3-217ENST00000546164 NANOGP8Q6NSW7 305 aa10.57□□□□□ -0.72
YBX3-217ENST00000546164 MTDHQ86UE4 582 aaKnown RBP10.57□□□□□ -0.72
YBX3-217ENST00000546164 STK32CQ86UX6 486 aa10.57□□□□□ -0.72
YBX3-217ENST00000546164 SLC30A8Q8IWU4 369 aa10.57□□□□□ -0.72
YBX3-217ENST00000546164 TUSC5Q8IXB3 177 aa10.57□□□□□ -0.72
YBX3-217ENST00000546164 LSMEM1Q8N8F7 131 aa10.57□□□□□ -0.72
YBX3-217ENST00000546164 OR8J3Q8NGG0 315 aa10.57□□□□□ -0.72
YBX3-217ENST00000546164 LINC01560Q8TB33 94 aa10.57□□□□□ -0.72
YBX3-217ENST00000546164 DDIT4LQ96D03 193 aa10.57□□□□□ -0.72
YBX3-217ENST00000546164 ZHX1-C8orf76Q96EF9 292 aa10.57□□□□□ -0.72
YBX3-217ENST00000546164 ZNF607Q96SK3 696 aa10.57□□□□□ -0.72
YBX3-217ENST00000546164 SH3GL1Q99961 368 aa10.57□□□□□ -0.72
YBX3-217ENST00000546164 POTEKPQ9BYX7 375 aa10.57□□□□□ -0.72
YBX3-217ENST00000546164 OR11A1Q9GZK7 315 aa10.57□□□□□ -0.72
YBX3-217ENST00000546164 EVA1AQ9H8M9 152 aa10.57□□□□□ -0.72
YBX3-217ENST00000546164 NANOGQ9H9S0 305 aa10.57□□□□□ -0.72
YBX3-217ENST00000546164 FANCFQ9NPI8 374 aa10.57□□□□□ -0.72
YBX3-217ENST00000546164 RASSF1Q9NS23 344 aa10.57□□□□□ -0.72
YBX3-217ENST00000546164 TMEM181Q9P2C4 612 aa10.57□□□□□ -0.72
YBX3-217ENST00000546164 NDRG3Q9UGV2 375 aa10.57□□□□□ -0.72
YBX3-217ENST00000546164 ANGPT4Q9Y264 503 aa10.57□□□□□ -0.72
YBX3-217ENST00000546164 TESMINQ9Y4I5 508 aa10.57□□□□□ -0.72
YBX3-217ENST00000546164 CAPN7Q9Y6W3 813 aa10.57□□□□□ -0.72
YBX3-217ENST00000546164 IGHV3-15A0A0B4J1V0 119 aa10.56□□□□□ -0.72
YBX3-217ENST00000546164 SH3D21A4FU49 640 aa10.56□□□□□ -0.72
YBX3-217ENST00000546164 C16orf97H3BN30 126 aa10.56□□□□□ -0.72
YBX3-217ENST00000546164 EIF1BO60739 113 aaKnown RBP10.56□□□□□ -0.72
YBX3-217ENST00000546164 MFN2O95140 757 aa10.56□□□□□ -0.72
YBX3-217ENST00000546164 KLK2P20151 261 aa10.56□□□□□ -0.72
YBX3-217ENST00000546164 CXCR1P25024 350 aa10.56□□□□□ -0.72
YBX3-217ENST00000546164 PCGF2P35227 344 aa10.56□□□□□ -0.72
YBX3-217ENST00000546164 GZMMP51124 257 aa10.56□□□□□ -0.72
YBX3-217ENST00000546164 SLC16A1P53985 500 aa10.56□□□□□ -0.72
YBX3-217ENST00000546164 RASGEF1BQ0VAM2 473 aa10.56□□□□□ -0.72
YBX3-217ENST00000546164 SF3A3Q12874 501 aaKnown RBP eCLIP10.56□□□□□ -0.72
YBX3-217ENST00000546164 CAPRIN1Q14444 709 aaKnown RBP10.56□□□□□ -0.72
YBX3-217ENST00000546164 REP15Q6BDI9 236 aa10.56□□□□□ -0.72
YBX3-217ENST00000546164 C6orf89Q6UWU4 347 aa10.56□□□□□ -0.72
YBX3-217ENST00000546164 TFAP2EQ6VUC0 442 aa10.56□□□□□ -0.72
YBX3-217ENST00000546164 BEND4Q6ZU67 534 aa10.56□□□□□ -0.72
YBX3-217ENST00000546164 NUFIP2Q7Z417 695 aaKnown RBP10.56□□□□□ -0.72
YBX3-217ENST00000546164 ATG4DQ86TL0 474 aaPredicted RBP10.56□□□□□ -0.72
YBX3-217ENST00000546164 COMTD1Q86VU5 262 aa10.56□□□□□ -0.72
YBX3-217ENST00000546164 SNX32Q86XE0 403 aa10.56□□□□□ -0.72
YBX3-217ENST00000546164 CADM2Q8N3J6 435 aa10.56□□□□□ -0.72
YBX3-217ENST00000546164 PCYOX1LQ8NBM8 494 aa10.56□□□□□ -0.72
YBX3-217ENST00000546164 C3orf49Q96BT1 292 aa10.56□□□□□ -0.72
YBX3-217ENST00000546164 LRRC58Q96CX6 371 aa10.56□□□□□ -0.72
YBX3-217ENST00000546164 OR10A4Q9H209 315 aa10.56□□□□□ -0.72
YBX3-217ENST00000546164 C12orf10Q9HB07 376 aa10.56□□□□□ -0.72
YBX3-217ENST00000546164 LOC100653049A0A140TA62 436 aa10.55□□□□□ -0.72
YBX3-217ENST00000546164 ZC3H12DA2A288 527 aaKnown RBP10.55□□□□□ -0.72
YBX3-217ENST00000546164 ZNF716A6NP11 495 aa10.55□□□□□ -0.72
YBX3-217ENST00000546164 A8MVM7 634 aa10.55□□□□□ -0.72
YBX3-217ENST00000546164 TMEM229AB2RXF0 380 aa10.55□□□□□ -0.72
YBX3-217ENST00000546164 MRASO14807 208 aa10.55□□□□□ -0.72
YBX3-217ENST00000546164 FRS3O43559 492 aa10.55□□□□□ -0.72
YBX3-217ENST00000546164 TPST1O60507 370 aa10.55□□□□□ -0.72
YBX3-217ENST00000546164 CCDC22O60826 627 aa10.55□□□□□ -0.72
YBX3-217ENST00000546164 NPIPB7O75200 414 aa10.55□□□□□ -0.72
YBX3-217ENST00000546164 GCM2O75603 506 aaPredicted RBP10.55□□□□□ -0.72
YBX3-217ENST00000546164 KRT34O76011 436 aa10.55□□□□□ -0.72
YBX3-217ENST00000546164 IMPDH2P12268 514 aa10.55□□□□□ -0.72
YBX3-217ENST00000546164 CCNA2P20248 432 aa10.55□□□□□ -0.72
YBX3-217ENST00000546164 PSMB1P20618 241 aaKnown RBP10.55□□□□□ -0.72
YBX3-217ENST00000546164 AQP1P29972 269 aa10.55□□□□□ -0.72
YBX3-217ENST00000546164 OR3A2P47893 321 aa10.55□□□□□ -0.72
YBX3-217ENST00000546164 KCNJ5P48544 419 aa10.55□□□□□ -0.72
YBX3-217ENST00000546164 SLC35A1P78382 337 aa10.55□□□□□ -0.72
YBX3-217ENST00000546164 MMEL1Q495T6 779 aa10.55□□□□□ -0.72
YBX3-217ENST00000546164 PAQR6Q6TCH4 344 aa10.55□□□□□ -0.72
YBX3-217ENST00000546164 STAC2Q6ZMT1 411 aa10.55□□□□□ -0.72
YBX3-217ENST00000546164 PATL1Q86TB9 770 aaKnown RBP10.55□□□□□ -0.72
YBX3-217ENST00000546164 TMEM200AQ86VY9 491 aa10.55□□□□□ -0.72
YBX3-217ENST00000546164 CALHM3Q86XJ0 350 aa10.55□□□□□ -0.72
YBX3-217ENST00000546164 ARMC8Q8IUR7 673 aa10.55□□□□□ -0.72
YBX3-217ENST00000546164 GABRG1Q8N1C3 465 aa10.55□□□□□ -0.72
YBX3-217ENST00000546164 OR10A6Q8NH74 314 aa10.55□□□□□ -0.72
YBX3-217ENST00000546164 RP9Q8TA86 221 aaKnown RBP10.55□□□□□ -0.72
YBX3-217ENST00000546164 PIGXQ8TBF5 258 aa10.55□□□□□ -0.72
YBX3-217ENST00000546164 GPATCH1Q9BRR8 931 aaKnown RBP10.55□□□□□ -0.72
YBX3-217ENST00000546164 TRIM2Q9C040 744 aa10.55□□□□□ -0.72
YBX3-217ENST00000546164 CLEC4MQ9H2X3 399 aaPredicted RBP10.55□□□□□ -0.72
YBX3-217ENST00000546164 C12orf49Q9H741 205 aa10.55□□□□□ -0.72
YBX3-217ENST00000546164 KLHL28Q9NXS3 571 aa10.55□□□□□ -0.72
YBX3-217ENST00000546164 EMC3Q9P0I2 261 aa10.55□□□□□ -0.72
YBX3-217ENST00000546164 TESQ9UGI8 421 aaKnown RBP10.55□□□□□ -0.72
YBX3-217ENST00000546164 LIPT2A6NK58 231 aa10.54□□□□□ -0.72
YBX3-217ENST00000546164 ZNF814B7Z6K7 855 aa10.54□□□□□ -0.72
YBX3-217ENST00000546164 M0QX08 132 aa10.54□□□□□ -0.72
YBX3-217ENST00000546164 GPR171O14626 319 aa10.54□□□□□ -0.72
YBX3-217ENST00000546164 FZD7O75084 574 aa10.54□□□□□ -0.72
YBX3-217ENST00000546164 CNOT4O95628 575 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms