RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 DTX4Q9Y2E6 619 aa14.54□□□□□ -0.08
LDLR-204ENST00000545707 TRBV2A0A0J9YWF9 115 aa14.53□□□□□ -0.08
LDLR-204ENST00000545707 FLRT2O43155 660 aa14.53□□□□□ -0.08
LDLR-204ENST00000545707 TNFSF14O43557 240 aa14.53□□□□□ -0.08
LDLR-204ENST00000545707 SELENOFO60613 162 aa14.53□□□□□ -0.08
LDLR-204ENST00000545707 FMO6PO60774 539 aa14.53□□□□□ -0.08
LDLR-204ENST00000545707 RDH16O75452 317 aa14.53□□□□□ -0.08
LDLR-204ENST00000545707 SSTR2P30874 369 aa14.53□□□□□ -0.08
LDLR-204ENST00000545707 MAP3K8P41279 467 aa14.53□□□□□ -0.08
LDLR-204ENST00000545707 TRAM1Q15629 374 aa14.53□□□□□ -0.08
LDLR-204ENST00000545707 ST3GAL2Q16842 350 aa14.53□□□□□ -0.08
LDLR-204ENST00000545707 ITPRIPL2Q3MIP1 535 aa14.53□□□□□ -0.08
LDLR-204ENST00000545707 ZNF542PQ5EBM4 170 aa14.53□□□□□ -0.08
LDLR-204ENST00000545707 SFRP4Q6FHJ7 346 aaPredicted RBP14.53□□□□□ -0.08
LDLR-204ENST00000545707 ZNF613Q6PF04 617 aa14.53□□□□□ -0.08
LDLR-204ENST00000545707 NUDT18Q6ZVK8 323 aa14.53□□□□□ -0.08
LDLR-204ENST00000545707 ZNF767PQ75MW2 155 aa14.53□□□□□ -0.08
LDLR-204ENST00000545707 SERPINA12Q8IW75 414 aa14.53□□□□□ -0.08
LDLR-204ENST00000545707 MS4A15Q8N5U1 240 aa14.53□□□□□ -0.08
LDLR-204ENST00000545707 ZNF671Q8TAW3 534 aa14.53□□□□□ -0.08
LDLR-204ENST00000545707 LGALS14Q8TCE9 139 aa14.53□□□□□ -0.08
LDLR-204ENST00000545707 SNX33Q8WV41 574 aa14.53□□□□□ -0.08
LDLR-204ENST00000545707 ANKRD9Q96BM1 317 aaPredicted RBP14.53□□□□□ -0.08
LDLR-204ENST00000545707 NMNAT3Q96T66 252 aa14.53□□□□□ -0.08
LDLR-204ENST00000545707 STACQ99469 402 aa14.53□□□□□ -0.08
LDLR-204ENST00000545707 SYNDIG1Q9H7V2 258 aa14.53□□□□□ -0.08
LDLR-204ENST00000545707 DNAJB12Q9NXW2 375 aaKnown RBP14.53□□□□□ -0.08
LDLR-204ENST00000545707 OBP2AQ9NY56 170 aa14.53□□□□□ -0.08
LDLR-204ENST00000545707 FLVCR2Q9UPI3 526 aa14.53□□□□□ -0.08
LDLR-204ENST00000545707 RWDD3Q9Y3V2 267 aa14.53□□□□□ -0.08
LDLR-204ENST00000545707 A0A087WV62 115 aa14.53□□□□□ -0.08
LDLR-204ENST00000545707 A0A1W2PQ72 361 aa14.53□□□□□ -0.08
LDLR-204ENST00000545707 A0A1W2PQF6 199 aa14.53□□□□□ -0.08
LDLR-204ENST00000545707 NOS1APO75052 506 aaPredicted RBP14.53□□□□□ -0.08
LDLR-204ENST00000545707 CD53P19397 219 aa14.53□□□□□ -0.08
LDLR-204ENST00000545707 EDNRAP25101 427 aa14.53□□□□□ -0.08
LDLR-204ENST00000545707 SLC6A6P31641 620 aa14.53□□□□□ -0.08
LDLR-204ENST00000545707 CLDN12P56749 244 aa14.53□□□□□ -0.08
LDLR-204ENST00000545707 SIRPAP78324 504 aa14.53□□□□□ -0.08
LDLR-204ENST00000545707 PSG6Q00889 435 aa14.53□□□□□ -0.08
LDLR-204ENST00000545707 CDK5R1Q15078 307 aa14.53□□□□□ -0.08
LDLR-204ENST00000545707 HES5Q5TA89 166 aa14.53□□□□□ -0.08
LDLR-204ENST00000545707 KIRREL2Q6UWL6 708 aa14.53□□□□□ -0.08
LDLR-204ENST00000545707 RFPL4BQ6ZWI9 263 aa14.53□□□□□ -0.08
LDLR-204ENST00000545707 CA13Q8N1Q1 262 aa14.53□□□□□ -0.08
LDLR-204ENST00000545707 UCKL1Q9NWZ5 548 aa14.53□□□□□ -0.08
LDLR-204ENST00000545707 STMN3Q9NZ72 180 aa14.53□□□□□ -0.08
LDLR-204ENST00000545707 NPFFR2Q9Y5X5 522 aa14.53□□□□□ -0.08
LDLR-204ENST00000545707 TRABD2BA6NFA1 517 aa14.52□□□□□ -0.08
LDLR-204ENST00000545707 ACOD1A6NK06 481 aa14.52□□□□□ -0.08
LDLR-204ENST00000545707 OR10H2O60403 315 aa14.52□□□□□ -0.08
LDLR-204ENST00000545707 UBL3O95164 117 aa14.52□□□□□ -0.08
LDLR-204ENST00000545707 ZNF10P21506 573 aaPredicted RBP14.52□□□□□ -0.08
LDLR-204ENST00000545707 NTSR1P30989 418 aa14.52□□□□□ -0.08
LDLR-204ENST00000545707 NFATC4Q14934 902 aa14.52□□□□□ -0.08
LDLR-204ENST00000545707 ZSWIM7Q19AV6 140 aa14.52□□□□□ -0.08
LDLR-204ENST00000545707 UBE2Q1Q7Z7E8 422 aa14.52□□□□□ -0.08
LDLR-204ENST00000545707 OR6K6Q8NGW6 343 aa14.52□□□□□ -0.08
LDLR-204ENST00000545707 GIMAP1Q8WWP7 306 aa14.52□□□□□ -0.08
LDLR-204ENST00000545707 PIGKQ92643 395 aa14.52□□□□□ -0.08
LDLR-204ENST00000545707 SMIM19Q96E16 107 aa14.52□□□□□ -0.08
LDLR-204ENST00000545707 WDR92Q96MX6 357 aa14.52□□□□□ -0.08
LDLR-204ENST00000545707 LYRM4Q9HD34 91 aa14.52□□□□□ -0.08
LDLR-204ENST00000545707 CHRNA9Q9UGM1 479 aa14.52□□□□□ -0.08
LDLR-204ENST00000545707 NUBP2Q9Y5Y2 271 aa14.52□□□□□ -0.08
LDLR-204ENST00000545707 SPTBP11277 2137 aa14.52□□□□□ -0.08
LDLR-204ENST00000545707 GON4LQ3T8J9 2241 aa14.52□□□□□ -0.09
LDLR-204ENST00000545707 A0A1B0GVT2 93 aa14.52□□□□□ -0.09
LDLR-204ENST00000545707 A6NCN8 305 aa14.52□□□□□ -0.09
LDLR-204ENST00000545707 ANKRD61A6NGH8 418 aa14.52□□□□□ -0.09
LDLR-204ENST00000545707 IFNGP01579 166 aa14.52□□□□□ -0.09
LDLR-204ENST00000545707 HPXP02790 462 aa14.52□□□□□ -0.09
LDLR-204ENST00000545707 PTHLHP12272 177 aa14.52□□□□□ -0.09
LDLR-204ENST00000545707 HOXB2P14652 356 aa14.52□□□□□ -0.09
LDLR-204ENST00000545707 RPL4P36578 427 aaKnown RBP14.52□□□□□ -0.09
LDLR-204ENST00000545707 MMP15P51511 669 aa14.52□□□□□ -0.09
LDLR-204ENST00000545707 SNTB2Q13425 540 aaKnown RBP14.52□□□□□ -0.09
LDLR-204ENST00000545707 ERV3-1Q14264 604 aa14.52□□□□□ -0.09
LDLR-204ENST00000545707 GSG1Q2KHT4 349 aa14.52□□□□□ -0.09
LDLR-204ENST00000545707 TMEM255AQ5JRV8 349 aa14.52□□□□□ -0.09
LDLR-204ENST00000545707 STPG1Q5TH74 334 aa14.52□□□□□ -0.09
LDLR-204ENST00000545707 SLC35F2Q8IXU6 374 aa14.52□□□□□ -0.09
LDLR-204ENST00000545707 ELMOD2Q8IZ81 293 aa14.52□□□□□ -0.09
LDLR-204ENST00000545707 CMTM4Q8IZR5 234 aa14.52□□□□□ -0.09
LDLR-204ENST00000545707 ZNF433Q8N7K0 673 aaPredicted RBP14.52□□□□□ -0.09
LDLR-204ENST00000545707 OR9A4Q8NGU2 314 aa14.52□□□□□ -0.09
LDLR-204ENST00000545707 HAVCR2Q8TDQ0 301 aa14.52□□□□□ -0.09
LDLR-204ENST00000545707 HERVK_113Q902F9 699 aa14.52□□□□□ -0.09
LDLR-204ENST00000545707 TCEAL2Q9H3H9 227 aaPredicted RBP14.52□□□□□ -0.09
LDLR-204ENST00000545707 NOX4Q9NPH5 578 aa14.52□□□□□ -0.09
LDLR-204ENST00000545707 POT1Q9NUX5 634 aa14.52□□□□□ -0.09
LDLR-204ENST00000545707 HRASLS2Q9NWW9 162 aa14.52□□□□□ -0.09
LDLR-204ENST00000545707 HAO2Q9NYQ3 351 aa14.52□□□□□ -0.09
LDLR-204ENST00000545707 LEUTXA8MZ59 168 aa14.51□□□□□ -0.09
LDLR-204ENST00000545707 OGG1O15527 345 aa14.51□□□□□ -0.09
LDLR-204ENST00000545707 LINC01565O15544 149 aa14.51□□□□□ -0.09
LDLR-204ENST00000545707 GMDSO60547 372 aa14.51□□□□□ -0.09
LDLR-204ENST00000545707 GALR3O60755 368 aaPredicted RBP14.51□□□□□ -0.09
LDLR-204ENST00000545707 TOXO94900 526 aa14.51□□□□□ -0.09
LDLR-204ENST00000545707 H2AFB2P0C5Z0 115 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms