RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 AURKBQ96GD4 344 aaPredicted RBP18.65■□□□□ 0.58
SCARB1-210ENST00000545493 CXorf56Q9H5V9 222 aa18.65■□□□□ 0.58
SCARB1-210ENST00000545493 ESRP2Q9H6T0 727 aaKnown RBP18.65■□□□□ 0.58
SCARB1-210ENST00000545493 MTHFD2LQ9H903 347 aaPredicted RBP18.65■□□□□ 0.58
SCARB1-210ENST00000545493 TMEM181Q9P2C4 612 aa18.65■□□□□ 0.58
SCARB1-210ENST00000545493 LAMP3Q9UQV4 416 aa18.65■□□□□ 0.58
SCARB1-210ENST00000545493 NOSIPQ9Y314 301 aaKnown RBP18.65■□□□□ 0.58
SCARB1-210ENST00000545493 FN1P02751 2386 aaKnown RBP18.65■□□□□ 0.58
SCARB1-210ENST00000545493 CDHR4A6H8M9 788 aa18.64■□□□□ 0.57
SCARB1-210ENST00000545493 DPRXA6NFQ7 191 aa18.64■□□□□ 0.57
SCARB1-210ENST00000545493 CFAP73A6NFT4 308 aa18.64■□□□□ 0.57
SCARB1-210ENST00000545493 ZNF208O43345 1280 aa18.64■□□□□ 0.57
SCARB1-210ENST00000545493 TMCC2O75069 709 aa18.64■□□□□ 0.57
SCARB1-210ENST00000545493 ERLIN1O75477 346 aa18.64■□□□□ 0.57
SCARB1-210ENST00000545493 CNOT4O95628 575 aaKnown RBP18.64■□□□□ 0.57
SCARB1-210ENST00000545493 BCHEP06276 602 aa18.64■□□□□ 0.57
SCARB1-210ENST00000545493 SOD3P08294 240 aa18.64■□□□□ 0.57
SCARB1-210ENST00000545493 DANCRP0C864 163 aa18.64■□□□□ 0.57
SCARB1-210ENST00000545493 IL7RP16871 459 aa18.64■□□□□ 0.57
SCARB1-210ENST00000545493 SLC1A3P43003 542 aa18.64■□□□□ 0.57
SCARB1-210ENST00000545493 MAGEA8P43361 318 aa18.64■□□□□ 0.57
SCARB1-210ENST00000545493 CLK1P49759 484 aaKnown RBP18.64■□□□□ 0.57
SCARB1-210ENST00000545493 OR2B6P58173 313 aa18.64■□□□□ 0.57
SCARB1-210ENST00000545493 H3F3AP84243 136 aa18.64■□□□□ 0.57
SCARB1-210ENST00000545493 PPA1Q15181 289 aa18.64■□□□□ 0.57
SCARB1-210ENST00000545493 ZNF672Q499Z4 452 aaPredicted RBP18.64■□□□□ 0.57
SCARB1-210ENST00000545493 LIN52Q52LA3 116 aa18.64■□□□□ 0.57
SCARB1-210ENST00000545493 RPS26P11Q5JNZ5 115 aaPredicted RBP18.64■□□□□ 0.57
SCARB1-210ENST00000545493 ZNF433Q8N7K0 673 aaPredicted RBP18.64■□□□□ 0.57
SCARB1-210ENST00000545493 FBXW5Q969U6 566 aa18.64■□□□□ 0.57
SCARB1-210ENST00000545493 USB1Q9BQ65 265 aaKnown RBP18.64■□□□□ 0.57
SCARB1-210ENST00000545493 TPT1P8Q9HAU6 139 aa18.64■□□□□ 0.57
SCARB1-210ENST00000545493 NGBQ9NPG2 151 aa18.64■□□□□ 0.57
SCARB1-210ENST00000545493 RLIMQ9NVW2 624 aa18.64■□□□□ 0.57
SCARB1-210ENST00000545493 MALT1Q9UDY8 824 aa18.64■□□□□ 0.57
SCARB1-210ENST00000545493 SMAD7O15105 426 aaKnown RBP18.63■□□□□ 0.57
SCARB1-210ENST00000545493 UBDO15205 165 aa18.63■□□□□ 0.57
SCARB1-210ENST00000545493 RAD51DO75771 328 aa18.63■□□□□ 0.57
SCARB1-210ENST00000545493 PGM3O95394 542 aa18.63■□□□□ 0.57
SCARB1-210ENST00000545493 GKN3PP0CG01 181 aa18.63■□□□□ 0.57
SCARB1-210ENST00000545493 ZCCHC18P0CG32 403 aa18.63■□□□□ 0.57
SCARB1-210ENST00000545493 HOXB9P17482 250 aaPredicted RBP18.63■□□□□ 0.57
SCARB1-210ENST00000545493 GGT1P19440 569 aa18.63■□□□□ 0.57
SCARB1-210ENST00000545493 FKBP2P26885 142 aaKnown RBP18.63■□□□□ 0.57
SCARB1-210ENST00000545493 CRATP43155 626 aa18.63■□□□□ 0.57
SCARB1-210ENST00000545493 DSTNP60981 165 aa18.63■□□□□ 0.57
SCARB1-210ENST00000545493 RPS4XP62701 263 aaKnown RBP18.63■□□□□ 0.57
SCARB1-210ENST00000545493 GNA13Q14344 377 aa18.63■□□□□ 0.57
SCARB1-210ENST00000545493 TIMM23BQ5SRD1 257 aa18.63■□□□□ 0.57
SCARB1-210ENST00000545493 FBXW9Q5XUX1 488 aa18.63■□□□□ 0.57
SCARB1-210ENST00000545493 PEX5LQ8IYB4 626 aa18.63■□□□□ 0.57
SCARB1-210ENST00000545493 PMM1Q92871 262 aa18.63■□□□□ 0.57
SCARB1-210ENST00000545493 APH1AQ96BI3 265 aa18.63■□□□□ 0.57
SCARB1-210ENST00000545493 DDIT4LQ96D03 193 aa18.63■□□□□ 0.57
SCARB1-210ENST00000545493 TMEM19Q96HH6 336 aa18.63■□□□□ 0.57
SCARB1-210ENST00000545493 TRIM2Q9C040 744 aa18.63■□□□□ 0.57
SCARB1-210ENST00000545493 TRAPPC4Q9Y296 219 aa18.63■□□□□ 0.57
SCARB1-210ENST00000545493 ZNF443Q9Y2A4 671 aaPredicted RBP18.63■□□□□ 0.57
SCARB1-210ENST00000545493 CHST2Q9Y4C5 530 aa18.63■□□□□ 0.57
SCARB1-210ENST00000545493 MAGED1Q9Y5V3 778 aaPredicted RBP18.63■□□□□ 0.57
SCARB1-210ENST00000545493 USH1CQ9Y6N9 552 aa18.63■□□□□ 0.57
SCARB1-210ENST00000545493 CADP27708 2225 aa18.63■□□□□ 0.57
SCARB1-210ENST00000545493 OR5H1A6NKK0 313 aa18.62■□□□□ 0.57
SCARB1-210ENST00000545493 ANP32DO95626 131 aa18.62■□□□□ 0.57
SCARB1-210ENST00000545493 LY6G6DO95868 133 aa18.62■□□□□ 0.57
SCARB1-210ENST00000545493 TFPTP0C1Z6 253 aa18.62■□□□□ 0.57
SCARB1-210ENST00000545493 POLR2JP52435 117 aaKnown RBP18.62■□□□□ 0.57
SCARB1-210ENST00000545493 CRISP3P54108 245 aa18.62■□□□□ 0.57
SCARB1-210ENST00000545493 FOXG1P55316 489 aaPredicted RBP18.62■□□□□ 0.57
SCARB1-210ENST00000545493 ATP5J2P56134 94 aa18.62■□□□□ 0.57
SCARB1-210ENST00000545493 RNF220Q5VTB9 566 aa18.62■□□□□ 0.57
SCARB1-210ENST00000545493 MIER2Q8N344 545 aa18.62■□□□□ 0.57
SCARB1-210ENST00000545493 OR52P1PQ8NH57 321 aa18.62■□□□□ 0.57
SCARB1-210ENST00000545493 SLC38A5Q8WUX1 472 aa18.62■□□□□ 0.57
SCARB1-210ENST00000545493 ITCHQ96J02 903 aa18.62■□□□□ 0.57
SCARB1-210ENST00000545493 BDH2Q9BUT1 245 aa18.62■□□□□ 0.57
SCARB1-210ENST00000545493 ADAM19Q9H013 955 aa18.62■□□□□ 0.57
SCARB1-210ENST00000545493 RMND5AQ9H871 391 aa18.62■□□□□ 0.57
SCARB1-210ENST00000545493 FLVCR1Q9Y5Y0 555 aa18.62■□□□□ 0.57
SCARB1-210ENST00000545493 SHISA9B4DS77 424 aa18.61■□□□□ 0.57
SCARB1-210ENST00000545493 OVOL3O00110 214 aa18.61■□□□□ 0.57
SCARB1-210ENST00000545493 PDLIM1O00151 329 aa18.61■□□□□ 0.57
SCARB1-210ENST00000545493 GPR171O14626 319 aa18.61■□□□□ 0.57
SCARB1-210ENST00000545493 UQCRBP14927 111 aa18.61■□□□□ 0.57
SCARB1-210ENST00000545493 ACAA2P42765 397 aaKnown RBP18.61■□□□□ 0.57
SCARB1-210ENST00000545493 SLC35A1P78382 337 aa18.61■□□□□ 0.57
SCARB1-210ENST00000545493 PGGHGQ32M88 737 aa18.61■□□□□ 0.57
SCARB1-210ENST00000545493 C6orf10Q5SRN2 563 aa18.61■□□□□ 0.57
SCARB1-210ENST00000545493 SLC2A7Q6PXP3 512 aa18.61■□□□□ 0.57
SCARB1-210ENST00000545493 EPGNQ6UW88 154 aa18.61■□□□□ 0.57
SCARB1-210ENST00000545493 UBE2J2Q8N2K1 259 aa18.61■□□□□ 0.57
SCARB1-210ENST00000545493 OR52E4Q8NGH9 312 aa18.61■□□□□ 0.57
SCARB1-210ENST00000545493 GTF2H4Q92759 462 aa18.61■□□□□ 0.57
SCARB1-210ENST00000545493 C7orf26Q96N11 449 aa18.61■□□□□ 0.57
SCARB1-210ENST00000545493 PAIP1Q9H074 479 aaKnown RBP18.61■□□□□ 0.57
SCARB1-210ENST00000545493 CALML5Q9NZT1 146 aa18.61■□□□□ 0.57
SCARB1-210ENST00000545493 FAM234BA2RU67 622 aa18.6■□□□□ 0.57
SCARB1-210ENST00000545493 FAM171A2A8MVW0 826 aa18.6■□□□□ 0.57
SCARB1-210ENST00000545493 ITGA5P08648 1049 aa18.6■□□□□ 0.57
SCARB1-210ENST00000545493 NUDT7P0C024 238 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms