RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 PLAURQ03405 335 aa10.51□□□□□ -0.73
HDAC4-216ENST00000544989 RBBP4Q09028 425 aa10.51□□□□□ -0.73
HDAC4-216ENST00000544989 MAPRE2Q15555 327 aa10.51□□□□□ -0.73
HDAC4-216ENST00000544989 ABLIM2Q6H8Q1 611 aa10.51□□□□□ -0.73
HDAC4-216ENST00000544989 TFAP2EQ6VUC0 442 aa10.51□□□□□ -0.73
HDAC4-216ENST00000544989 STAC2Q6ZMT1 411 aa10.51□□□□□ -0.73
HDAC4-216ENST00000544989 Q6ZT83 130 aa10.51□□□□□ -0.73
HDAC4-216ENST00000544989 HMGN2P46Q86SG4 172 aa10.51□□□□□ -0.73
HDAC4-216ENST00000544989 DHDDSQ86SQ9 333 aa10.51□□□□□ -0.73
HDAC4-216ENST00000544989 VRK2Q86Y07 508 aa10.51□□□□□ -0.73
HDAC4-216ENST00000544989 MSRB3Q8IXL7 192 aa10.51□□□□□ -0.73
HDAC4-216ENST00000544989 SH3GL1Q99961 368 aa10.51□□□□□ -0.73
HDAC4-216ENST00000544989 PIF1Q9H611 641 aa10.51□□□□□ -0.73
HDAC4-216ENST00000544989 CCDC134Q9H6E4 229 aa10.51□□□□□ -0.73
HDAC4-216ENST00000544989 C12orf49Q9H741 205 aa10.51□□□□□ -0.73
HDAC4-216ENST00000544989 NGBQ9NPG2 151 aa10.51□□□□□ -0.73
HDAC4-216ENST00000544989 ZNF446Q9NWS9 450 aa10.51□□□□□ -0.73
HDAC4-216ENST00000544989 KLHL28Q9NXS3 571 aa10.51□□□□□ -0.73
HDAC4-216ENST00000544989 SLC13A4Q9UKG4 626 aa10.51□□□□□ -0.73
HDAC4-216ENST00000544989 ANGPT4Q9Y264 503 aa10.51□□□□□ -0.73
HDAC4-216ENST00000544989 AKAP6Q13023 2319 aa10.5□□□□□ -0.73
HDAC4-216ENST00000544989 BBIP1A8MTZ0 92 aa10.5□□□□□ -0.73
HDAC4-216ENST00000544989 A8MVM7 634 aa10.5□□□□□ -0.73
HDAC4-216ENST00000544989 AP3D1O14617 1153 aa10.5□□□□□ -0.73
HDAC4-216ENST00000544989 ADAM11O75078 769 aa10.5□□□□□ -0.73
HDAC4-216ENST00000544989 RAF1P04049 648 aa10.5□□□□□ -0.73
HDAC4-216ENST00000544989 VIMP08670 466 aaKnown RBP10.5□□□□□ -0.73
HDAC4-216ENST00000544989 IL32P24001 234 aa10.5□□□□□ -0.73
HDAC4-216ENST00000544989 ADSLP30566 484 aaPredicted RBP10.5□□□□□ -0.73
HDAC4-216ENST00000544989 CCKARP32238 428 aa10.5□□□□□ -0.73
HDAC4-216ENST00000544989 ACAA2P42765 397 aaKnown RBP10.5□□□□□ -0.73
HDAC4-216ENST00000544989 OR3A2P47893 321 aa10.5□□□□□ -0.73
HDAC4-216ENST00000544989 ARFIP2P53365 341 aa10.5□□□□□ -0.73
HDAC4-216ENST00000544989 SLC16A1P53985 500 aa10.5□□□□□ -0.73
HDAC4-216ENST00000544989 OR2B6P58173 313 aa10.5□□□□□ -0.73
HDAC4-216ENST00000544989 CYLC2Q14093 348 aaPredicted RBP10.5□□□□□ -0.73
HDAC4-216ENST00000544989 SCARB2Q14108 478 aa10.5□□□□□ -0.73
HDAC4-216ENST00000544989 RUNDC3AQ59EK9 446 aa10.5□□□□□ -0.73
HDAC4-216ENST00000544989 BEX5Q5H9J7 111 aa10.5□□□□□ -0.73
HDAC4-216ENST00000544989 COQ5Q5HYK3 327 aa10.5□□□□□ -0.73
HDAC4-216ENST00000544989 RPS26P11Q5JNZ5 115 aaPredicted RBP10.5□□□□□ -0.73
HDAC4-216ENST00000544989 DHRS4L2Q6PKH6 230 aa10.5□□□□□ -0.73
HDAC4-216ENST00000544989 PAQR6Q6TCH4 344 aa10.5□□□□□ -0.73
HDAC4-216ENST00000544989 C5orf46Q6UWT4 87 aa10.5□□□□□ -0.73
HDAC4-216ENST00000544989 PAMR1Q6UXH9 720 aa10.5□□□□□ -0.73
HDAC4-216ENST00000544989 DLEU7Q6UYE1 221 aa10.5□□□□□ -0.73
HDAC4-216ENST00000544989 SPNS3Q6ZMD2 512 aa10.5□□□□□ -0.73
HDAC4-216ENST00000544989 ZNF100Q8IYN0 542 aa10.5□□□□□ -0.73
HDAC4-216ENST00000544989 CADM2Q8N3J6 435 aa10.5□□□□□ -0.73
HDAC4-216ENST00000544989 C11orf65Q8NCR3 313 aa10.5□□□□□ -0.73
HDAC4-216ENST00000544989 HIPK4Q8NE63 616 aa10.5□□□□□ -0.73
HDAC4-216ENST00000544989 NFKBIDQ8NI38 313 aa10.5□□□□□ -0.73
HDAC4-216ENST00000544989 STK35Q8TDR2 534 aa10.5□□□□□ -0.73
HDAC4-216ENST00000544989 HSD17B8Q92506 261 aa10.5□□□□□ -0.73
HDAC4-216ENST00000544989 KISS1RQ969F8 398 aaPredicted RBP10.5□□□□□ -0.73
HDAC4-216ENST00000544989 MAL2Q969L2 176 aa10.5□□□□□ -0.73
HDAC4-216ENST00000544989 MBD6Q96DN6 1003 aa10.5□□□□□ -0.73
HDAC4-216ENST00000544989 THOC1Q96FV9 657 aaKnown RBP10.5□□□□□ -0.73
HDAC4-216ENST00000544989 ARL5BQ96KC2 179 aa10.5□□□□□ -0.73
HDAC4-216ENST00000544989 ANKRD27Q96NW4 1050 aa10.5□□□□□ -0.73
HDAC4-216ENST00000544989 CGREF1Q99674 301 aa10.5□□□□□ -0.73
HDAC4-216ENST00000544989 FOXC2Q99958 501 aa10.5□□□□□ -0.73
HDAC4-216ENST00000544989 CPPED1Q9BRF8 314 aaPredicted RBP10.5□□□□□ -0.73
HDAC4-216ENST00000544989 TAPBPLQ9BX59 468 aa10.5□□□□□ -0.73
HDAC4-216ENST00000544989 TMEM120AQ9BXJ8 343 aa10.5□□□□□ -0.73
HDAC4-216ENST00000544989 C12orf10Q9HB07 376 aa10.5□□□□□ -0.73
HDAC4-216ENST00000544989 RLIMQ9NVW2 624 aa10.5□□□□□ -0.73
HDAC4-216ENST00000544989 PARPBPQ9NWS1 579 aa10.5□□□□□ -0.73
HDAC4-216ENST00000544989 SLAMF8Q9P0V8 285 aa10.5□□□□□ -0.73
HDAC4-216ENST00000544989 RPS6KB2Q9UBS0 482 aa10.5□□□□□ -0.73
HDAC4-216ENST00000544989 ITGB1BP2Q9UKP3 347 aa10.5□□□□□ -0.73
HDAC4-216ENST00000544989 IGHV3-15A0A0B4J1V0 119 aa10.49□□□□□ -0.73
HDAC4-216ENST00000544989 TMEM72A0PK05 275 aa10.49□□□□□ -0.73
HDAC4-216ENST00000544989 SLC22A2O15244 555 aa10.49□□□□□ -0.73
HDAC4-216ENST00000544989 GCM2O75603 506 aaPredicted RBP10.49□□□□□ -0.73
HDAC4-216ENST00000544989 VAMP5O95183 116 aa10.49□□□□□ -0.73
HDAC4-216ENST00000544989 NUDT7P0C024 238 aa10.49□□□□□ -0.73
HDAC4-216ENST00000544989 GKN3PP0CG01 181 aa10.49□□□□□ -0.73
HDAC4-216ENST00000544989 IDUAP35475 653 aa10.49□□□□□ -0.73
HDAC4-216ENST00000544989 NCALDP61601 193 aa10.49□□□□□ -0.73
HDAC4-216ENST00000544989 H3F3AP84243 136 aa10.49□□□□□ -0.73
HDAC4-216ENST00000544989 ITGADQ13349 1161 aa10.49□□□□□ -0.73
HDAC4-216ENST00000544989 NFYCQ13952 458 aa10.49□□□□□ -0.73
HDAC4-216ENST00000544989 KEAP1Q14145 624 aa10.49□□□□□ -0.73
HDAC4-216ENST00000544989 CYP51A1Q16850 503 aa10.49□□□□□ -0.73
HDAC4-216ENST00000544989 SFRP5Q5T4F7 317 aa10.49□□□□□ -0.73
HDAC4-216ENST00000544989 C1QTNF12Q5T7M4 302 aa10.49□□□□□ -0.73
HDAC4-216ENST00000544989 INTS11Q5TA45 600 aaKnown RBP10.49□□□□□ -0.73
HDAC4-216ENST00000544989 NUFIP2Q7Z417 695 aaKnown RBP10.49□□□□□ -0.73
HDAC4-216ENST00000544989 P2RY8Q86VZ1 359 aa10.49□□□□□ -0.73
HDAC4-216ENST00000544989 GABRG1Q8N1C3 465 aa10.49□□□□□ -0.73
HDAC4-216ENST00000544989 CLIP4Q8N3C7 705 aa10.49□□□□□ -0.73
HDAC4-216ENST00000544989 DNAJA4Q8WW22 397 aaPredicted RBP10.49□□□□□ -0.73
HDAC4-216ENST00000544989 ALPK1Q96QP1 1244 aa10.49□□□□□ -0.73
HDAC4-216ENST00000544989 SF3B5Q9BWJ5 86 aaKnown RBP10.49□□□□□ -0.73
HDAC4-216ENST00000544989 TRIM2Q9C040 744 aa10.49□□□□□ -0.73
HDAC4-216ENST00000544989 OR11A1Q9GZK7 315 aa10.49□□□□□ -0.73
HDAC4-216ENST00000544989 ACTR6Q9GZN1 396 aa10.49□□□□□ -0.73
HDAC4-216ENST00000544989 PLEKHF2Q9H8W4 249 aa10.49□□□□□ -0.73
HDAC4-216ENST00000544989 FGFR1OP2Q9NVK5 253 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms