RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 CDH2P19022 906 aaPredicted RBP5.96□□□□□ -1.46
CDCA3-209ENST00000544610 CD33P20138 364 aa5.96□□□□□ -1.46
CDCA3-209ENST00000544610 HTR3AP46098 478 aa5.96□□□□□ -1.46
CDCA3-209ENST00000544610 SSR4P51571 173 aa5.96□□□□□ -1.46
CDCA3-209ENST00000544610 NUP107P57740 925 aa5.96□□□□□ -1.46
CDCA3-209ENST00000544610 RGS8P57771 180 aaPredicted RBP5.96□□□□□ -1.46
CDCA3-209ENST00000544610 GPR85P60893 370 aa5.96□□□□□ -1.46
CDCA3-209ENST00000544610 GANABQ14697 944 aaKnown RBP5.96□□□□□ -1.46
CDCA3-209ENST00000544610 GPR68Q15743 365 aa5.96□□□□□ -1.46
CDCA3-209ENST00000544610 ANKDD1AQ495B1 522 aa5.96□□□□□ -1.46
CDCA3-209ENST00000544610 MRPL2Q5T653 305 aaKnown RBP5.96□□□□□ -1.46
CDCA3-209ENST00000544610 SLC30A6Q6NXT4 461 aa5.96□□□□□ -1.46
CDCA3-209ENST00000544610 VTCN1Q7Z7D3 282 aa5.96□□□□□ -1.46
CDCA3-209ENST00000544610 TMEM200AQ86VY9 491 aa5.96□□□□□ -1.46
CDCA3-209ENST00000544610 CCDC71Q8IV32 467 aaPredicted RBP5.96□□□□□ -1.46
CDCA3-209ENST00000544610 PARP8Q8N3A8 854 aa5.96□□□□□ -1.46
CDCA3-209ENST00000544610 TMEM156Q8N614 296 aa5.96□□□□□ -1.46
CDCA3-209ENST00000544610 FAM86B1Q8N7N1 296 aa5.96□□□□□ -1.46
CDCA3-209ENST00000544610 OR4C3Q8NH37 302 aa5.96□□□□□ -1.46
CDCA3-209ENST00000544610 PAQR8Q8TEZ7 354 aa5.96□□□□□ -1.46
CDCA3-209ENST00000544610 NINJ1Q92982 152 aa5.96□□□□□ -1.46
CDCA3-209ENST00000544610 HGDQ93099 445 aa5.96□□□□□ -1.46
CDCA3-209ENST00000544610 TMBIM1Q969X1 311 aa5.96□□□□□ -1.46
CDCA3-209ENST00000544610 EME1Q96AY2 570 aa5.96□□□□□ -1.46
CDCA3-209ENST00000544610 ZG16BQ96DA0 208 aa5.96□□□□□ -1.46
CDCA3-209ENST00000544610 GAL3ST4Q96RP7 486 aa5.96□□□□□ -1.46
CDCA3-209ENST00000544610 RASL10BQ96S79 203 aa5.96□□□□□ -1.46
CDCA3-209ENST00000544610 FOXC2Q99958 501 aa5.96□□□□□ -1.46
CDCA3-209ENST00000544610 PKP2Q99959 881 aa5.96□□□□□ -1.46
CDCA3-209ENST00000544610 ZNF426Q9BUY5 554 aa5.96□□□□□ -1.46
CDCA3-209ENST00000544610 AMBRA1Q9C0C7 1298 aa5.96□□□□□ -1.46
CDCA3-209ENST00000544610 KLHL4Q9C0H6 718 aa5.96□□□□□ -1.46
CDCA3-209ENST00000544610 CXXC4Q9H2H0 198 aa5.96□□□□□ -1.46
CDCA3-209ENST00000544610 ZDHHC11Q9H8X9 412 aa5.96□□□□□ -1.46
CDCA3-209ENST00000544610 NMNAT1Q9HAN9 279 aaPredicted RBP5.96□□□□□ -1.46
CDCA3-209ENST00000544610 NTN4Q9HB63 628 aa5.96□□□□□ -1.46
CDCA3-209ENST00000544610 KRCC1Q9NPI7 259 aaPredicted RBP5.96□□□□□ -1.46
CDCA3-209ENST00000544610 KCNJ16Q9NPI9 418 aa5.96□□□□□ -1.46
CDCA3-209ENST00000544610 DEPPQ9NTK1 212 aa5.96□□□□□ -1.46
CDCA3-209ENST00000544610 DNAJB12Q9NXW2 375 aaKnown RBP5.96□□□□□ -1.46
CDCA3-209ENST00000544610 KCNE5Q9UJ90 142 aa5.96□□□□□ -1.46
CDCA3-209ENST00000544610 SH3GLB1Q9Y371 365 aa5.96□□□□□ -1.46
CDCA3-209ENST00000544610 MRPS18CQ9Y3D5 142 aaKnown RBP5.96□□□□□ -1.46
CDCA3-209ENST00000544610 LRRC42Q9Y546 428 aa5.96□□□□□ -1.46
CDCA3-209ENST00000544610 EXPH5Q8NEV8 1989 aa5.96□□□□□ -1.46
CDCA3-209ENST00000544610 SETD2Q9BYW2 2564 aaPredicted RBP5.95□□□□□ -1.46
CDCA3-209ENST00000544610 A0A087WZY1 265 aa5.95□□□□□ -1.46
CDCA3-209ENST00000544610 C7orf72A4D263 438 aa5.95□□□□□ -1.46
CDCA3-209ENST00000544610 PINLYPA6NC86 204 aa5.95□□□□□ -1.46
CDCA3-209ENST00000544610 OR14I1A6ND48 311 aa5.95□□□□□ -1.46
CDCA3-209ENST00000544610 PRAMEF25A6NGN4 478 aa5.95□□□□□ -1.46
CDCA3-209ENST00000544610 G3V2T6 193 aa5.95□□□□□ -1.46
CDCA3-209ENST00000544610 H0Y3Z8 333 aa5.95□□□□□ -1.46
CDCA3-209ENST00000544610 H0YAE9 185 aa5.95□□□□□ -1.46
CDCA3-209ENST00000544610 ACOT7O00154 380 aa5.95□□□□□ -1.46
CDCA3-209ENST00000544610 GNGT2O14610 69 aa5.95□□□□□ -1.46
CDCA3-209ENST00000544610 TPD52L2O43399 206 aaKnown RBP5.95□□□□□ -1.46
CDCA3-209ENST00000544610 CHP2O43745 196 aa5.95□□□□□ -1.46
CDCA3-209ENST00000544610 PRKNO60260 465 aaPredicted RBP5.95□□□□□ -1.46
CDCA3-209ENST00000544610 TPST1O60507 370 aa5.95□□□□□ -1.46
CDCA3-209ENST00000544610 UGT2B11O75310 529 aa5.95□□□□□ -1.46
CDCA3-209ENST00000544610 BCAS1O75363 584 aaPredicted RBP5.95□□□□□ -1.46
CDCA3-209ENST00000544610 TIPRLO75663 272 aa5.95□□□□□ -1.46
CDCA3-209ENST00000544610 OR2J2O76002 312 aa5.95□□□□□ -1.46
CDCA3-209ENST00000544610 GLSO94925 669 aaPredicted RBP5.95□□□□□ -1.46
CDCA3-209ENST00000544610 GADD45GO95257 159 aa5.95□□□□□ -1.46
CDCA3-209ENST00000544610 BAG2O95816 211 aa5.95□□□□□ -1.46
CDCA3-209ENST00000544610 EPPINO95925 133 aa5.95□□□□□ -1.46
CDCA3-209ENST00000544610 ADAP00813 363 aa5.95□□□□□ -1.46
CDCA3-209ENST00000544610 OPN1SWP03999 348 aa5.95□□□□□ -1.46
CDCA3-209ENST00000544610 ALPLP05186 524 aa5.95□□□□□ -1.46
CDCA3-209ENST00000544610 H1F0P07305 194 aaKnown RBP5.95□□□□□ -1.46
CDCA3-209ENST00000544610 UBL4AP11441 157 aa5.95□□□□□ -1.46
CDCA3-209ENST00000544610 CYP4B1P13584 511 aa5.95□□□□□ -1.46
CDCA3-209ENST00000544610 CD99P14209 185 aa5.95□□□□□ -1.46
CDCA3-209ENST00000544610 ZNF26P17031 533 aaPredicted RBP5.95□□□□□ -1.46
CDCA3-209ENST00000544610 HOXB4P17483 251 aaPredicted RBP5.95□□□□□ -1.46
CDCA3-209ENST00000544610 ACVR2AP27037 513 aa5.95□□□□□ -1.46
CDCA3-209ENST00000544610 ADH6P28332 368 aa5.95□□□□□ -1.46
CDCA3-209ENST00000544610 RRM2P31350 389 aa5.95□□□□□ -1.46
CDCA3-209ENST00000544610 EVI2BP34910 448 aa5.95□□□□□ -1.46
CDCA3-209ENST00000544610 EIF1P41567 113 aaKnown RBP5.95□□□□□ -1.46
CDCA3-209ENST00000544610 ACAA2P42765 397 aaKnown RBP5.95□□□□□ -1.46
CDCA3-209ENST00000544610 P2RX1P51575 399 aa5.95□□□□□ -1.46
CDCA3-209ENST00000544610 ALDH3A2P51648 485 aa5.95□□□□□ -1.46
CDCA3-209ENST00000544610 ZNF136P52737 540 aa5.95□□□□□ -1.46
CDCA3-209ENST00000544610 IST1P53990 364 aa5.95□□□□□ -1.46
CDCA3-209ENST00000544610 RAD23AP54725 363 aa5.95□□□□□ -1.46
CDCA3-209ENST00000544610 CASP9P55211 416 aa5.95□□□□□ -1.46
CDCA3-209ENST00000544610 COPZ1P61923 177 aa5.95□□□□□ -1.46
CDCA3-209ENST00000544610 PPP2R2BQ00005 443 aa5.95□□□□□ -1.46
CDCA3-209ENST00000544610 PMPCAQ10713 525 aa5.95□□□□□ -1.46
CDCA3-209ENST00000544610 SKP2Q13309 424 aa5.95□□□□□ -1.46
CDCA3-209ENST00000544610 TRAM2Q15035 370 aa5.95□□□□□ -1.46
CDCA3-209ENST00000544610 TRIP10Q15642 601 aa5.95□□□□□ -1.46
CDCA3-209ENST00000544610 MAPK14Q16539 360 aa5.95□□□□□ -1.46
CDCA3-209ENST00000544610 MICAQ29983 383 aa5.95□□□□□ -1.46
CDCA3-209ENST00000544610 GRAMD1BQ3KR37 738 aa5.95□□□□□ -1.46
CDCA3-209ENST00000544610 GLYR1Q49A26 553 aaPredicted RBP5.95□□□□□ -1.46
CDCA3-209ENST00000544610 GXYLT1Q4G148 440 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms