RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 CYP4V2Q6ZWL3 525 aaPredicted RBP11.9□□□□□ -0.5
CHD4-211ENST00000544484 FAM57BQ71RH2 274 aa11.9□□□□□ -0.5
CHD4-211ENST00000544484 SIMC1Q8NDZ2 872 aa11.9□□□□□ -0.5
CHD4-211ENST00000544484 IL1F10Q8WWZ1 152 aa11.9□□□□□ -0.5
CHD4-211ENST00000544484 PHB2Q99623 299 aa11.9□□□□□ -0.5
CHD4-211ENST00000544484 A0A1B0GUL6 1792 aa11.9□□□□□ -0.5
CHD4-211ENST00000544484 ANKRD30BLA7E2S9 258 aa11.9□□□□□ -0.5
CHD4-211ENST00000544484 PLPP1O14494 284 aa11.9□□□□□ -0.5
CHD4-211ENST00000544484 MT-ND4P03905 459 aa11.9□□□□□ -0.5
CHD4-211ENST00000544484 TBCEQ15813 527 aaPredicted RBP11.9□□□□□ -0.5
CHD4-211ENST00000544484 BCL7AQ4VC05 210 aa11.9□□□□□ -0.5
CHD4-211ENST00000544484 COX15Q7KZN9 410 aa11.9□□□□□ -0.5
CHD4-211ENST00000544484 ANKRD33Q7Z3H0 272 aa11.9□□□□□ -0.5
CHD4-211ENST00000544484 CHPT1Q8WUD6 406 aa11.9□□□□□ -0.5
CHD4-211ENST00000544484 TMEM255BQ8WV15 326 aa11.9□□□□□ -0.5
CHD4-211ENST00000544484 ANKRD10Q9NXR5 420 aa11.9□□□□□ -0.5
CHD4-211ENST00000544484 TBC1D29Q9UFV1 150 aa11.9□□□□□ -0.5
CHD4-211ENST00000544484 WDR37Q9Y2I8 494 aa11.9□□□□□ -0.5
CHD4-211ENST00000544484 HCRTR1O43613 425 aa11.9□□□□□ -0.5
CHD4-211ENST00000544484 TFP02787 698 aa11.9□□□□□ -0.5
CHD4-211ENST00000544484 MAKP20794 623 aa11.9□□□□□ -0.5
CHD4-211ENST00000544484 TNFSF8P32971 234 aa11.9□□□□□ -0.5
CHD4-211ENST00000544484 CLDN12P56749 244 aa11.9□□□□□ -0.5
CHD4-211ENST00000544484 DCAF12Q5T6F0 453 aa11.9□□□□□ -0.5
CHD4-211ENST00000544484 SLC6A19Q695T7 634 aa11.9□□□□□ -0.5
CHD4-211ENST00000544484 TMEM102Q8N9M5 508 aaPredicted RBP11.9□□□□□ -0.5
CHD4-211ENST00000544484 ACBD4Q8NC06 268 aa11.9□□□□□ -0.5
CHD4-211ENST00000544484 OR6T1Q8NGN1 323 aa11.9□□□□□ -0.5
CHD4-211ENST00000544484 NIPSNAP1Q9BPW8 284 aa11.9□□□□□ -0.5
CHD4-211ENST00000544484 VN1R3Q9BXE9 311 aa11.9□□□□□ -0.5
CHD4-211ENST00000544484 BLACEA4D250 179 aa11.9□□□□□ -0.5
CHD4-211ENST00000544484 GABRPO00591 440 aa11.9□□□□□ -0.5
CHD4-211ENST00000544484 ADPRHP54922 357 aa11.9□□□□□ -0.5
CHD4-211ENST00000544484 PLCXD3Q63HM9 321 aa11.9□□□□□ -0.5
CHD4-211ENST00000544484 ELP2Q6IA86 826 aa11.9□□□□□ -0.5
CHD4-211ENST00000544484 NCCRP1Q6ZVX7 275 aaPredicted RBP11.9□□□□□ -0.5
CHD4-211ENST00000544484 CHTF18Q8WVB6 975 aa11.9□□□□□ -0.5
CHD4-211ENST00000544484 NMNAT3Q96T66 252 aa11.9□□□□□ -0.5
CHD4-211ENST00000544484 HCAR1Q9BXC0 346 aa11.9□□□□□ -0.5
CHD4-211ENST00000544484 SEMA6CQ9H3T2 930 aa11.9□□□□□ -0.5
CHD4-211ENST00000544484 RGCCQ9H4X1 137 aa11.9□□□□□ -0.5
CHD4-211ENST00000544484 SC5DO75845 299 aa11.89□□□□□ -0.51
CHD4-211ENST00000544484 PSPHP78330 225 aa11.89□□□□□ -0.51
CHD4-211ENST00000544484 MLLT11Q13015 90 aaPredicted RBP11.89□□□□□ -0.51
CHD4-211ENST00000544484 SLC48A1Q6P1K1 146 aa11.89□□□□□ -0.51
CHD4-211ENST00000544484 LINC00696Q6ZRV3 163 aa11.89□□□□□ -0.51
CHD4-211ENST00000544484 NDUFAF7Q7L592 441 aa11.89□□□□□ -0.51
CHD4-211ENST00000544484 DNAJC22Q8N4W6 341 aa11.89□□□□□ -0.51
CHD4-211ENST00000544484 BEST4Q8NFU0 473 aa11.89□□□□□ -0.51
CHD4-211ENST00000544484 ZNF649Q9BS31 505 aa11.89□□□□□ -0.51
CHD4-211ENST00000544484 EPHX3Q9H6B9 360 aa11.89□□□□□ -0.51
CHD4-211ENST00000544484 C1GALT1Q9NS00 363 aa11.89□□□□□ -0.51
CHD4-211ENST00000544484 ABRACLQ9P1F3 81 aa11.89□□□□□ -0.51
CHD4-211ENST00000544484 RABL2AQ9UBK7 228 aaPredicted RBP11.89□□□□□ -0.51
CHD4-211ENST00000544484 RABL2BQ9UNT1 228 aa11.89□□□□□ -0.51
CHD4-211ENST00000544484 IGHV3-20A0A0C4DH32 117 aa11.89□□□□□ -0.51
CHD4-211ENST00000544484 ZNF593O00488 134 aaPredicted RBP11.89□□□□□ -0.51
CHD4-211ENST00000544484 ZNF44P15621 663 aa11.89□□□□□ -0.51
CHD4-211ENST00000544484 CLDN17P56750 224 aa11.89□□□□□ -0.51
CHD4-211ENST00000544484 LINC01599Q8WXQ3 324 aa11.89□□□□□ -0.51
CHD4-211ENST00000544484 HYLS1Q96M11 299 aa11.89□□□□□ -0.51
CHD4-211ENST00000544484 A0A1B0GWA3 101 aa11.89□□□□□ -0.51
CHD4-211ENST00000544484 A0A1W2PQ09 198 aa11.89□□□□□ -0.51
CHD4-211ENST00000544484 SPDEFO95238 335 aa11.89□□□□□ -0.51
CHD4-211ENST00000544484 UTS2O95399 124 aa11.89□□□□□ -0.51
CHD4-211ENST00000544484 PTPN6P29350 595 aa11.89□□□□□ -0.51
CHD4-211ENST00000544484 OPRD1P41143 372 aa11.89□□□□□ -0.51
CHD4-211ENST00000544484 METRNLQ641Q3 311 aa11.89□□□□□ -0.51
CHD4-211ENST00000544484 PELI3Q8N2H9 469 aa11.89□□□□□ -0.51
CHD4-211ENST00000544484 RSC1A1Q92681 617 aa11.89□□□□□ -0.51
CHD4-211ENST00000544484 NEURL3Q96EH8 262 aa11.89□□□□□ -0.51
CHD4-211ENST00000544484 ELMOD3Q96FG2 381 aa11.89□□□□□ -0.51
CHD4-211ENST00000544484 MRPL33O75394 65 aaKnown RBP11.89□□□□□ -0.51
CHD4-211ENST00000544484 GIFP27352 417 aa11.89□□□□□ -0.51
CHD4-211ENST00000544484 HTR2AP28223 471 aa11.89□□□□□ -0.51
CHD4-211ENST00000544484 HOXA9P31269 272 aa11.89□□□□□ -0.51
CHD4-211ENST00000544484 MELKQ14680 651 aa11.89□□□□□ -0.51
CHD4-211ENST00000544484 ARL6IP1Q15041 203 aa11.89□□□□□ -0.51
CHD4-211ENST00000544484 FCRLAQ7L513 359 aa11.89□□□□□ -0.51
CHD4-211ENST00000544484 OR1J4Q8NGS1 313 aa11.89□□□□□ -0.51
CHD4-211ENST00000544484 CPNE5Q9HCH3 593 aa11.89□□□□□ -0.51
CHD4-211ENST00000544484 OTOL1A6NHN0 477 aaPredicted RBP11.89□□□□□ -0.51
CHD4-211ENST00000544484 HOXC11O43248 304 aaPredicted RBP11.89□□□□□ -0.51
CHD4-211ENST00000544484 CXADRP78310 365 aa11.89□□□□□ -0.51
CHD4-211ENST00000544484 TGFBR3Q03167 851 aa11.89□□□□□ -0.51
CHD4-211ENST00000544484 GAB1Q13480 694 aa11.89□□□□□ -0.51
CHD4-211ENST00000544484 MOB3CQ70IA8 216 aa11.89□□□□□ -0.51
CHD4-211ENST00000544484 ZNF695Q8IW36 515 aa11.89□□□□□ -0.51
CHD4-211ENST00000544484 DEDD2Q8WXF8 326 aa11.89□□□□□ -0.51
CHD4-211ENST00000544484 SIDT1Q9NXL6 827 aaKnown RBP11.89□□□□□ -0.51
CHD4-211ENST00000544484 SLC6A14Q9UN76 642 aa11.89□□□□□ -0.51
CHD4-211ENST00000544484 PTHP01270 115 aa11.89□□□□□ -0.51
CHD4-211ENST00000544484 ABOP16442 354 aa11.89□□□□□ -0.51
CHD4-211ENST00000544484 CRMP1Q14194 572 aa11.89□□□□□ -0.51
CHD4-211ENST00000544484 TMEM53Q6P2H8 277 aa11.89□□□□□ -0.51
CHD4-211ENST00000544484 TECPR1Q7Z6L1 1165 aa11.89□□□□□ -0.51
CHD4-211ENST00000544484 FRMD1Q8N878 549 aa11.89□□□□□ -0.51
CHD4-211ENST00000544484 ELP4Q96EB1 424 aa11.89□□□□□ -0.51
CHD4-211ENST00000544484 LCORQ96JN0 433 aaPredicted RBP11.89□□□□□ -0.51
CHD4-211ENST00000544484 GPR78Q96P69 363 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms