RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, human

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHFR-223	ENST00000544268	CDH26	Q8IXH8	852 aa		13.84	□□□□□ -0.19
CHFR-223	ENST00000544268	ARL14	Q8N4G2	192 aa		13.84	□□□□□ -0.19
CHFR-223	ENST00000544268	OR5T3	Q8NGG3	340 aa		13.84	□□□□□ -0.19
CHFR-223	ENST00000544268	OR52P1P	Q8NH57	321 aa		13.84	□□□□□ -0.19
CHFR-223	ENST00000544268	CEP76	Q8TAP6	659 aa		13.84	□□□□□ -0.19
CHFR-223	ENST00000544268	TEX47	Q8TBZ9	253 aa		13.84	□□□□□ -0.19
CHFR-223	ENST00000544268	SMAP2	Q8WU79	429 aa	Predicted RBP	13.84	□□□□□ -0.19
CHFR-223	ENST00000544268	EDA	Q92838	391 aa		13.84	□□□□□ -0.19
CHFR-223	ENST00000544268	HGD	Q93099	445 aa		13.84	□□□□□ -0.19
CHFR-223	ENST00000544268	KATNB1	Q9BVA0	655 aa		13.84	□□□□□ -0.19
CHFR-223	ENST00000544268	ZNF416	Q9BWM5	594 aa		13.84	□□□□□ -0.19
CHFR-223	ENST00000544268	REG4	Q9BYZ8	158 aa		13.84	□□□□□ -0.19
CHFR-223	ENST00000544268	MED20	Q9H944	212 aa		13.84	□□□□□ -0.19
CHFR-223	ENST00000544268	CAPN10	Q9HC96	672 aa		13.84	□□□□□ -0.19
CHFR-223	ENST00000544268	PRMT8	Q9NR22	394 aa	Predicted RBP	13.84	□□□□□ -0.19
CHFR-223	ENST00000544268	PCDHB16	Q9NRJ7	776 aa		13.84	□□□□□ -0.19
CHFR-223	ENST00000544268	COMMD3	Q9UBI1	195 aa		13.84	□□□□□ -0.19
CHFR-223	ENST00000544268	MALT1	Q9UDY8	824 aa		13.84	□□□□□ -0.19
CHFR-223	ENST00000544268	CCDC163	A0A0D9SF12	145 aa		13.83	□□□□□ -0.19
CHFR-223	ENST00000544268		A0A1B0GVT2	93 aa		13.83	□□□□□ -0.19
CHFR-223	ENST00000544268	C7orf66	A4D0T2	115 aa		13.83	□□□□□ -0.19
CHFR-223	ENST00000544268	SOCS6	O14544	535 aa		13.83	□□□□□ -0.19
CHFR-223	ENST00000544268	TNFSF14	O43557	240 aa		13.83	□□□□□ -0.19
CHFR-223	ENST00000544268	AKAP8	O43823	692 aa	Known RBP	13.83	□□□□□ -0.19
CHFR-223	ENST00000544268	PTP4A3	O75365	173 aa		13.83	□□□□□ -0.19
CHFR-223	ENST00000544268	DHFR	P00374	187 aa		13.83	□□□□□ -0.19
CHFR-223	ENST00000544268	SLC6A1	P30531	599 aa		13.83	□□□□□ -0.19
CHFR-223	ENST00000544268	EVX1	P49640	407 aa		13.83	□□□□□ -0.19
CHFR-223	ENST00000544268	ZNF81	P51508	661 aa		13.83	□□□□□ -0.19
CHFR-223	ENST00000544268	PRR5	P85299	388 aa		13.83	□□□□□ -0.19
CHFR-223	ENST00000544268	CSTF1	Q05048	431 aa	Known RBP	13.83	□□□□□ -0.19
CHFR-223	ENST00000544268	C1D	Q13901	141 aa	Known RBP	13.83	□□□□□ -0.19
CHFR-223	ENST00000544268	GPR68	Q15743	365 aa		13.83	□□□□□ -0.19
CHFR-223	ENST00000544268	DUSP5	Q16690	384 aa		13.83	□□□□□ -0.19
CHFR-223	ENST00000544268	CD300LD	Q6UXZ3	194 aa		13.83	□□□□□ -0.19
CHFR-223	ENST00000544268	WDR88	Q6ZMY6	472 aa		13.83	□□□□□ -0.19
CHFR-223	ENST00000544268	TMPRSS9	Q7Z410	1059 aa		13.83	□□□□□ -0.19
CHFR-223	ENST00000544268	MS4A15	Q8N5U1	240 aa		13.83	□□□□□ -0.19
CHFR-223	ENST00000544268	TMEM52	Q8NDY8	209 aa		13.83	□□□□□ -0.19
CHFR-223	ENST00000544268	OR6C4	Q8NGE1	309 aa		13.83	□□□□□ -0.19
CHFR-223	ENST00000544268	PELO	Q9BRX2	385 aa	Known RBP	13.83	□□□□□ -0.19
CHFR-223	ENST00000544268	STARD5	Q9NSY2	213 aa		13.83	□□□□□ -0.19
CHFR-223	ENST00000544268	SLCO1C1	Q9NYB5	712 aa		13.83	□□□□□ -0.19
CHFR-223	ENST00000544268	LIPT1	Q9Y234	373 aa		13.83	□□□□□ -0.19
CHFR-223	ENST00000544268	PRELID3B	Q9Y3B1	194 aa		13.83	□□□□□ -0.19
CHFR-223	ENST00000544268	ENTPD2	Q9Y5L3	495 aa		13.83	□□□□□ -0.19
CHFR-223	ENST00000544268	WDFY3	Q8IZQ1	3526 aa		13.83	□□□□□ -0.2
CHFR-223	ENST00000544268	CACNA1E	Q15878	2313 aa		13.83	□□□□□ -0.2
CHFR-223	ENST00000544268	LMO7DN	F2Z398	122 aa		13.83	□□□□□ -0.2
CHFR-223	ENST00000544268	CTSB	P07858	339 aa		13.83	□□□□□ -0.2
CHFR-223	ENST00000544268	NR2F6	P10588	404 aa		13.83	□□□□□ -0.2
CHFR-223	ENST00000544268	MTNR1A	P48039	350 aa		13.83	□□□□□ -0.2
CHFR-223	ENST00000544268	DHPS	P49366	369 aa	Predicted RBP	13.83	□□□□□ -0.2
CHFR-223	ENST00000544268	RGS8	P57771	180 aa	Predicted RBP	13.83	□□□□□ -0.2
CHFR-223	ENST00000544268	RPS15A	P62244	130 aa	Known RBP	13.83	□□□□□ -0.2
CHFR-223	ENST00000544268	CRTC2	Q53ET0	693 aa	Predicted RBP	13.83	□□□□□ -0.2
CHFR-223	ENST00000544268	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	13.83	□□□□□ -0.2
CHFR-223	ENST00000544268	ZNF57	Q68EA5	555 aa	Predicted RBP	13.83	□□□□□ -0.2
CHFR-223	ENST00000544268	ZC3H14	Q6PJT7	736 aa	Known RBP	13.83	□□□□□ -0.2
CHFR-223	ENST00000544268	GDF7	Q7Z4P5	450 aa		13.83	□□□□□ -0.2
CHFR-223	ENST00000544268	OR56A1	Q8NGH5	318 aa		13.83	□□□□□ -0.2
CHFR-223	ENST00000544268	SCMH1	Q96GD3	660 aa		13.83	□□□□□ -0.2
CHFR-223	ENST00000544268	ART5	Q96L15	291 aa		13.83	□□□□□ -0.2
CHFR-223	ENST00000544268	MCHR1	Q99705	422 aa		13.83	□□□□□ -0.2
CHFR-223	ENST00000544268	ARHGDIG	Q99819	225 aa		13.83	□□□□□ -0.2
CHFR-223	ENST00000544268	TMED9	Q9BVK6	235 aa		13.83	□□□□□ -0.2
CHFR-223	ENST00000544268	SLC7A7	Q9UM01	511 aa		13.83	□□□□□ -0.2
CHFR-223	ENST00000544268	SF3B6	Q9Y3B4	125 aa	Known RBP	13.83	□□□□□ -0.2
CHFR-223	ENST00000544268	SESN1	Q9Y6P5	492 aa		13.83	□□□□□ -0.2
CHFR-223	ENST00000544268	ZNF780B	Q9Y6R6	833 aa		13.83	□□□□□ -0.2
CHFR-223	ENST00000544268	MFSD2B	A6NFX1	497 aa		13.82	□□□□□ -0.2
CHFR-223	ENST00000544268	KRBOX1	C9JBD0	128 aa		13.82	□□□□□ -0.2
CHFR-223	ENST00000544268	ST8SIA5	O15466	376 aa		13.82	□□□□□ -0.2
CHFR-223	ENST00000544268	HCRTR1	O43613	425 aa		13.82	□□□□□ -0.2
CHFR-223	ENST00000544268	CFD	P00746	253 aa	Predicted RBP	13.82	□□□□□ -0.2
CHFR-223	ENST00000544268	CPE	P16870	476 aa		13.82	□□□□□ -0.2
CHFR-223	ENST00000544268	PRKAR1B	P31321	381 aa		13.82	□□□□□ -0.2
CHFR-223	ENST00000544268	FASLG	P48023	281 aa		13.82	□□□□□ -0.2
CHFR-223	ENST00000544268	ATP12A	P54707	1039 aa		13.82	□□□□□ -0.2
CHFR-223	ENST00000544268	WNT4	P56705	351 aa		13.82	□□□□□ -0.2
CHFR-223	ENST00000544268	CD276	Q5ZPR3	534 aa		13.82	□□□□□ -0.2
CHFR-223	ENST00000544268	FCRLB	Q6BAA4	426 aa		13.82	□□□□□ -0.2
CHFR-223	ENST00000544268	SMARCD3	Q6STE5	483 aa		13.82	□□□□□ -0.2
CHFR-223	ENST00000544268	OVCH2	Q7RTZ1	564 aa		13.82	□□□□□ -0.2
CHFR-223	ENST00000544268	OOSP2	Q86WS3	158 aa		13.82	□□□□□ -0.2
CHFR-223	ENST00000544268	MAML2	Q8IZL2	1156 aa	Predicted RBP	13.82	□□□□□ -0.2
CHFR-223	ENST00000544268	ADAMTS15	Q8TE58	950 aa		13.82	□□□□□ -0.2
CHFR-223	ENST00000544268	NXPE2	Q96DL1	559 aa		13.82	□□□□□ -0.2
CHFR-223	ENST00000544268	SDHAF2	Q9NX18	166 aa		13.82	□□□□□ -0.2
CHFR-223	ENST00000544268	GTPBP1	O00178	669 aa	Known RBP	13.82	□□□□□ -0.2
CHFR-223	ENST00000544268	PEX12	O00623	359 aa		13.82	□□□□□ -0.2
CHFR-223	ENST00000544268	SLC30A4	O14863	429 aa		13.82	□□□□□ -0.2
CHFR-223	ENST00000544268	LAMTOR5	O43504	91 aa		13.82	□□□□□ -0.2
CHFR-223	ENST00000544268	PIAS2	O75928	621 aa		13.82	□□□□□ -0.2
CHFR-223	ENST00000544268	ACP2	P11117	423 aa		13.82	□□□□□ -0.2
CHFR-223	ENST00000544268		Q3ZCU0	254 aa		13.82	□□□□□ -0.2
CHFR-223	ENST00000544268	PLA1A	Q53H76	456 aa		13.82	□□□□□ -0.2
CHFR-223	ENST00000544268	LYSMD4	Q5XG99	296 aa		13.82	□□□□□ -0.2
CHFR-223	ENST00000544268	MFSD12	Q6NUT3	480 aa		13.82	□□□□□ -0.2
CHFR-223	ENST00000544268	ZNF836	Q6ZNA1	936 aa		13.82	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms