RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 SEMG1P04279 462 aa12.23□□□□□ -0.45
SP140-213ENST00000543928 CLK1P49759 484 aaKnown RBP12.23□□□□□ -0.45
SP140-213ENST00000543928 CARD18P57730 90 aa12.23□□□□□ -0.45
SP140-213ENST00000543928 MYBPHQ13203 477 aa12.23□□□□□ -0.45
SP140-213ENST00000543928 FLOT2Q14254 428 aa12.23□□□□□ -0.45
SP140-213ENST00000543928 NSUN5P2Q63ZY6 315 aa12.23□□□□□ -0.45
SP140-213ENST00000543928 PLXDC2Q6UX71 529 aa12.23□□□□□ -0.45
SP140-213ENST00000543928 NCCRP1Q6ZVX7 275 aaPredicted RBP12.23□□□□□ -0.45
SP140-213ENST00000543928 GDF7Q7Z4P5 450 aa12.23□□□□□ -0.45
SP140-213ENST00000543928 ADGRE4PQ86SQ3 457 aa12.23□□□□□ -0.45
SP140-213ENST00000543928 OSTF1Q92882 214 aa12.23□□□□□ -0.45
SP140-213ENST00000543928 SLC41A3Q96GZ6 507 aa12.23□□□□□ -0.45
SP140-213ENST00000543928 C7orf34Q96L11 122 aa12.23□□□□□ -0.45
SP140-213ENST00000543928 PRRC1Q96M27 445 aa12.23□□□□□ -0.45
SP140-213ENST00000543928 DMRTA2Q96SC8 542 aa12.23□□□□□ -0.45
SP140-213ENST00000543928 POLR2J2Q9GZM3 115 aaKnown RBP12.23□□□□□ -0.45
SP140-213ENST00000543928 POLR2J3Q9H1A7 115 aaKnown RBP12.23□□□□□ -0.45
SP140-213ENST00000543928 CALHM2Q9HA72 323 aa12.23□□□□□ -0.45
SP140-213ENST00000543928 CLCF1Q9UBD9 225 aa12.23□□□□□ -0.45
SP140-213ENST00000543928 RIMS3Q9UJD0 308 aa12.23□□□□□ -0.45
SP140-213ENST00000543928 SLC7A7Q9UM01 511 aa12.23□□□□□ -0.45
SP140-213ENST00000543928 A4GNTQ9UNA3 340 aa12.23□□□□□ -0.45
SP140-213ENST00000543928 HDGFL3Q9Y3E1 203 aa12.23□□□□□ -0.45
SP140-213ENST00000543928 ENPP4Q9Y6X5 453 aa12.23□□□□□ -0.45
SP140-213ENST00000543928 MPDZO75970 2070 aa12.23□□□□□ -0.45
SP140-213ENST00000543928 DIDO1Q9BTC0 2240 aaKnown RBP12.22□□□□□ -0.45
SP140-213ENST00000543928 IGKV1D-42A0A075B6H8 117 aa12.22□□□□□ -0.45
SP140-213ENST00000543928 CD8B2A6NJW9 211 aa12.22□□□□□ -0.45
SP140-213ENST00000543928 SLC22A20A6NK97 555 aa12.22□□□□□ -0.45
SP140-213ENST00000543928 J3KTA2 159 aa12.22□□□□□ -0.45
SP140-213ENST00000543928 hCG_2039718K7EN88 272 aa12.22□□□□□ -0.45
SP140-213ENST00000543928 SULT2B1O00204 365 aa12.22□□□□□ -0.45
SP140-213ENST00000543928 GLI4P10075 376 aa12.22□□□□□ -0.45
SP140-213ENST00000543928 PTNP21246 168 aa12.22□□□□□ -0.45
SP140-213ENST00000543928 IFNA8P32881 189 aa12.22□□□□□ -0.45
SP140-213ENST00000543928 DIO1P49895 249 aa12.22□□□□□ -0.45
SP140-213ENST00000543928 VLDLRP98155 873 aa12.22□□□□□ -0.45
SP140-213ENST00000543928 EGR4Q05215 589 aa12.22□□□□□ -0.45
SP140-213ENST00000543928 FOXD4Q12950 439 aaPredicted RBP12.22□□□□□ -0.45
SP140-213ENST00000543928 PON3Q15166 354 aa12.22□□□□□ -0.45
SP140-213ENST00000543928 PPP4R4Q6NUP7 873 aa12.22□□□□□ -0.45
SP140-213ENST00000543928 WDR88Q6ZMY6 472 aa12.22□□□□□ -0.45
SP140-213ENST00000543928 TMPPEQ6ZT21 453 aa12.22□□□□□ -0.45
SP140-213ENST00000543928 SEM1Q6ZVN7 128 aa12.22□□□□□ -0.45
SP140-213ENST00000543928 TSEN54Q7Z6J9 526 aaKnown RBP12.22□□□□□ -0.45
SP140-213ENST00000543928 P3H2Q8IVL5 708 aa12.22□□□□□ -0.45
SP140-213ENST00000543928 MARVELD2Q8N4S9 558 aa12.22□□□□□ -0.45
SP140-213ENST00000543928 STK35Q8TDR2 534 aa12.22□□□□□ -0.45
SP140-213ENST00000543928 ZNF300Q96RE9 604 aaPredicted RBP12.22□□□□□ -0.45
SP140-213ENST00000543928 SEPHS2Q99611 448 aa12.22□□□□□ -0.45
SP140-213ENST00000543928 TTYH2Q9BSA4 534 aa12.22□□□□□ -0.45
SP140-213ENST00000543928 SRXN1Q9BYN0 137 aa12.22□□□□□ -0.45
SP140-213ENST00000543928 POTEKPQ9BYX7 375 aa12.22□□□□□ -0.45
SP140-213ENST00000543928 TIGARQ9NQ88 270 aa12.22□□□□□ -0.45
SP140-213ENST00000543928 PAQR5Q9NXK6 330 aaPredicted RBP12.22□□□□□ -0.45
SP140-213ENST00000543928 NDUFAF4Q9P032 175 aa12.22□□□□□ -0.45
SP140-213ENST00000543928 RHCGQ9UBD6 479 aa12.22□□□□□ -0.45
SP140-213ENST00000543928 ERRFI1Q9UJM3 462 aaPredicted RBP12.22□□□□□ -0.45
SP140-213ENST00000543928 MCTS1Q9ULC4 181 aaKnown RBP12.22□□□□□ -0.45
SP140-213ENST00000543928 SLC5A6Q9Y289 635 aa12.22□□□□□ -0.45
SP140-213ENST00000543928 ZNF175Q9Y473 711 aa12.22□□□□□ -0.45
SP140-213ENST00000543928 KIAA1549Q9HCM3 1950 aa12.21□□□□□ -0.45
SP140-213ENST00000543928 PCNX1Q96RV3 2341 aa12.21□□□□□ -0.45
SP140-213ENST00000543928 AQP12BA6NM10 295 aa12.21□□□□□ -0.45
SP140-213ENST00000543928 FFAR1O14842 300 aa12.21□□□□□ -0.45
SP140-213ENST00000543928 NPIPB7O75200 414 aa12.21□□□□□ -0.45
SP140-213ENST00000543928 DIRAS1O95057 198 aa12.21□□□□□ -0.45
SP140-213ENST00000543928 AHSA1O95433 338 aa12.21□□□□□ -0.45
SP140-213ENST00000543928 SYNGR4O95473 234 aa12.21□□□□□ -0.45
SP140-213ENST00000543928 TGM6O95932 706 aa12.21□□□□□ -0.45
SP140-213ENST00000543928 THRBP10828 461 aa12.21□□□□□ -0.45
SP140-213ENST00000543928 IMPDH2P12268 514 aa12.21□□□□□ -0.45
SP140-213ENST00000543928 IDUAP35475 653 aa12.21□□□□□ -0.45
SP140-213ENST00000543928 NUP107P57740 925 aa12.21□□□□□ -0.45
SP140-213ENST00000543928 RAC3P60763 192 aa12.21□□□□□ -0.45
SP140-213ENST00000543928 CSNK2A1P68400 391 aaPredicted RBP12.21□□□□□ -0.45
SP140-213ENST00000543928 PMPCAQ10713 525 aa12.21□□□□□ -0.45
SP140-213ENST00000543928 ST3GAL3Q11203 375 aa12.21□□□□□ -0.45
SP140-213ENST00000543928 C1orf140Q5VVS0 124 aa12.21□□□□□ -0.45
SP140-213ENST00000543928 TMEM211Q6ICI0 200 aa12.21□□□□□ -0.45
SP140-213ENST00000543928 LINC00114Q6XXX2 140 aa12.21□□□□□ -0.45
SP140-213ENST00000543928 P4HA3Q7Z4N8 544 aa12.21□□□□□ -0.45
SP140-213ENST00000543928 YTHDF3Q7Z739 585 aaKnown RBP12.21□□□□□ -0.45
SP140-213ENST00000543928 CYP4Z1Q86W10 505 aa12.21□□□□□ -0.45
SP140-213ENST00000543928 SPATA24Q86W54 205 aa12.21□□□□□ -0.45
SP140-213ENST00000543928 AQP12AQ8IXF9 295 aa12.21□□□□□ -0.45
SP140-213ENST00000543928 OFCC1Q8IZS5 231 aa12.21□□□□□ -0.45
SP140-213ENST00000543928 FNDC9Q8TBE3 224 aa12.21□□□□□ -0.45
SP140-213ENST00000543928 WNT2BQ93097 391 aa12.21□□□□□ -0.45
SP140-213ENST00000543928 POP5Q969H6 163 aaKnown RBP12.21□□□□□ -0.45
SP140-213ENST00000543928 UTP4Q969X6 686 aaKnown RBP12.21□□□□□ -0.45
SP140-213ENST00000543928 CPNE4Q96A23 557 aaPredicted RBP12.21□□□□□ -0.45
SP140-213ENST00000543928 CCDC120Q96HB5 630 aa12.21□□□□□ -0.45
SP140-213ENST00000543928 MPP4Q96JB8 637 aa12.21□□□□□ -0.45
SP140-213ENST00000543928 UCN2Q96RP3 112 aa12.21□□□□□ -0.45
SP140-213ENST00000543928 PRSS27Q9BQR3 290 aa12.21□□□□□ -0.45
SP140-213ENST00000543928 FNDC11Q9BVV2 318 aa12.21□□□□□ -0.45
SP140-213ENST00000543928 PRRG4Q9BZD6 226 aa12.21□□□□□ -0.45
SP140-213ENST00000543928 FAM32AQ9Y421 112 aaKnown RBP12.21□□□□□ -0.45
SP140-213ENST00000543928 PHF3Q92576 2039 aaKnown RBP12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms