RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 SERINC2Q96SA4 455 aa18.05■□□□□ 0.48
SUDS3-204ENST00000543473 COL4A1P02462 1669 aa18.04■□□□□ 0.48
SUDS3-204ENST00000543473 SIX6O95475 246 aa18.04■□□□□ 0.48
SUDS3-204ENST00000543473 MPIG6BO95866 241 aa18.04■□□□□ 0.48
SUDS3-204ENST00000543473 LCN10Q6JVE6 187 aa18.04■□□□□ 0.48
SUDS3-204ENST00000543473 MICU1Q9BPX6 476 aa18.04■□□□□ 0.48
SUDS3-204ENST00000543473 SLC38A1Q9H2H9 487 aa18.04■□□□□ 0.48
SUDS3-204ENST00000543473 PIAS3Q9Y6X2 628 aa18.04■□□□□ 0.48
SUDS3-204ENST00000543473 ECM29Q5VYK3 1845 aa18.04■□□□□ 0.48
SUDS3-204ENST00000543473 CPED1A4D0V7 1026 aa18.04■□□□□ 0.48
SUDS3-204ENST00000543473 OR52A4PA6NMU1 304 aa18.04■□□□□ 0.48
SUDS3-204ENST00000543473 ZNF888P0CJ79 500 aaPredicted RBP18.04■□□□□ 0.48
SUDS3-204ENST00000543473 CPEP16870 476 aa18.04■□□□□ 0.48
SUDS3-204ENST00000543473 NTSR1P30989 418 aa18.04■□□□□ 0.48
SUDS3-204ENST00000543473 GRM7Q14831 915 aa18.04■□□□□ 0.48
SUDS3-204ENST00000543473 DUSP6Q16828 381 aa18.04■□□□□ 0.48
SUDS3-204ENST00000543473 EIF2S3LQ2VIR3 472 aaKnown RBP18.04■□□□□ 0.48
SUDS3-204ENST00000543473 SEC22AQ96IW7 307 aa18.04■□□□□ 0.48
SUDS3-204ENST00000543473 INTS14Q96SY0 518 aa18.04■□□□□ 0.48
SUDS3-204ENST00000543473 FAM83CQ9BQN1 747 aa18.04■□□□□ 0.48
SUDS3-204ENST00000543473 METTL7AQ9H8H3 244 aa18.04■□□□□ 0.48
SUDS3-204ENST00000543473 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.04■□□□□ 0.48
SUDS3-204ENST00000543473 PRICKLE3O43900 615 aaPredicted RBP18.04■□□□□ 0.48
SUDS3-204ENST00000543473 CDK2P24941 298 aa18.04■□□□□ 0.48
SUDS3-204ENST00000543473 PLCXD2Q0VAA5 305 aa18.04■□□□□ 0.48
SUDS3-204ENST00000543473 RNF113BQ8IZP6 322 aaKnown RBP18.04■□□□□ 0.48
SUDS3-204ENST00000543473 OR4C15Q8NGM1 316 aa18.04■□□□□ 0.48
SUDS3-204ENST00000543473 PGAM5Q96HS1 289 aa18.04■□□□□ 0.48
SUDS3-204ENST00000543473 RADILQ96JH8 1075 aa18.04■□□□□ 0.48
SUDS3-204ENST00000543473 WDR92Q96MX6 357 aa18.04■□□□□ 0.48
SUDS3-204ENST00000543473 RTP3Q9BQQ7 232 aa18.04■□□□□ 0.48
SUDS3-204ENST00000543473 ATP13A2Q9NQ11 1180 aa18.04■□□□□ 0.48
SUDS3-204ENST00000543473 SYT7O43581 403 aa18.04■□□□□ 0.48
SUDS3-204ENST00000543473 RNGTTO60942 597 aaKnown RBP18.04■□□□□ 0.48
SUDS3-204ENST00000543473 RAB6AP20340 208 aa18.04■□□□□ 0.48
SUDS3-204ENST00000543473 MFSD13AQ14CX5 517 aa18.04■□□□□ 0.48
SUDS3-204ENST00000543473 SGCAQ16586 387 aa18.04■□□□□ 0.48
SUDS3-204ENST00000543473 OR2T7P0C7T2 308 aa18.03■□□□□ 0.48
SUDS3-204ENST00000543473 IGFBP6P24592 240 aaPredicted RBP18.03■□□□□ 0.48
SUDS3-204ENST00000543473 EVX1P49640 407 aa18.03■□□□□ 0.48
SUDS3-204ENST00000543473 CRMP1Q14194 572 aa18.03■□□□□ 0.48
SUDS3-204ENST00000543473 FAM71E1Q6IPT2 247 aa18.03■□□□□ 0.48
SUDS3-204ENST00000543473 OR2T27Q8NH04 317 aa18.03■□□□□ 0.48
SUDS3-204ENST00000543473 OR14A2Q96R54 314 aa18.03■□□□□ 0.48
SUDS3-204ENST00000543473 PRR14Q9BWN1 585 aa18.03■□□□□ 0.48
SUDS3-204ENST00000543473 SEMA4GQ9NTN9 838 aa18.03■□□□□ 0.48
SUDS3-204ENST00000543473 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.03■□□□□ 0.48
SUDS3-204ENST00000543473 GGT3PA6NGU5 568 aa18.03■□□□□ 0.48
SUDS3-204ENST00000543473 KLKB1P03952 638 aa18.03■□□□□ 0.48
SUDS3-204ENST00000543473 ZNF16P17020 682 aaPredicted RBP18.03■□□□□ 0.48
SUDS3-204ENST00000543473 ETV6P41212 452 aa18.03■□□□□ 0.48
SUDS3-204ENST00000543473 PEA15Q15121 130 aa18.03■□□□□ 0.48
SUDS3-204ENST00000543473 SIGIRRQ6IA17 410 aa18.03■□□□□ 0.48
SUDS3-204ENST00000543473 ZNF704Q6ZNC4 412 aaPredicted RBP18.03■□□□□ 0.48
SUDS3-204ENST00000543473 PRSS45Q7RTY3 260 aa18.03■□□□□ 0.48
SUDS3-204ENST00000543473 FGF13Q92913 245 aa18.03■□□□□ 0.48
SUDS3-204ENST00000543473 ZNF304Q9HCX3 659 aa18.03■□□□□ 0.48
SUDS3-204ENST00000543473 GPR34Q9UPC5 381 aa18.03■□□□□ 0.48
SUDS3-204ENST00000543473 ASPDHA6ND91 283 aa18.03■□□□□ 0.48
SUDS3-204ENST00000543473 SLC33A1O00400 549 aaPredicted RBP18.03■□□□□ 0.48
SUDS3-204ENST00000543473 CLDN20P56880 219 aa18.03■□□□□ 0.48
SUDS3-204ENST00000543473 ZNF674Q2M3X9 581 aa18.03■□□□□ 0.48
SUDS3-204ENST00000543473 AKR1C8PQ5T2L2 129 aa18.03■□□□□ 0.48
SUDS3-204ENST00000543473 OR6F1Q8NGZ6 308 aa18.03■□□□□ 0.48
SUDS3-204ENST00000543473 LMX1AQ8TE12 382 aa18.03■□□□□ 0.48
SUDS3-204ENST00000543473 MAP6Q96JE9 813 aa18.03■□□□□ 0.48
SUDS3-204ENST00000543473 VRK1Q99986 396 aaPredicted RBP18.03■□□□□ 0.48
SUDS3-204ENST00000543473 HCAR1Q9BXC0 346 aa18.03■□□□□ 0.48
SUDS3-204ENST00000543473 TP53P04637 393 aaPredicted RBP18.03■□□□□ 0.48
SUDS3-204ENST00000543473 OR8G3PP0DMU2 310 aa18.03■□□□□ 0.48
SUDS3-204ENST00000543473 FPR3P25089 353 aa18.03■□□□□ 0.48
SUDS3-204ENST00000543473 GPLD1P80108 840 aa18.03■□□□□ 0.48
SUDS3-204ENST00000543473 SLC7A9P82251 487 aa18.03■□□□□ 0.48
SUDS3-204ENST00000543473 SQSTM1Q13501 440 aa18.03■□□□□ 0.48
SUDS3-204ENST00000543473 MRPL2Q5T653 305 aaKnown RBP18.03■□□□□ 0.48
SUDS3-204ENST00000543473 OLIG3Q7RTU3 272 aa18.03■□□□□ 0.48
SUDS3-204ENST00000543473 CPXM2Q8N436 756 aa18.03■□□□□ 0.48
SUDS3-204ENST00000543473 OR5B12Q96R08 314 aa18.03■□□□□ 0.48
SUDS3-204ENST00000543473 ZFP57Q9NU63 452 aa18.03■□□□□ 0.48
SUDS3-204ENST00000543473 TMEM30AQ9NV96 361 aa18.03■□□□□ 0.48
SUDS3-204ENST00000543473 C2orf42Q9NWW7 574 aa18.03■□□□□ 0.48
SUDS3-204ENST00000543473 ADAM29Q9UKF5 820 aa18.03■□□□□ 0.48
SUDS3-204ENST00000543473 H3BQ06 376 aaPredicted RBP18.02■□□□□ 0.48
SUDS3-204ENST00000543473 SYT5O00445 386 aa18.02■□□□□ 0.48
SUDS3-204ENST00000543473 KIR2DL3P43628 341 aa18.02■□□□□ 0.48
SUDS3-204ENST00000543473 ACSM5Q6NUN0 579 aa18.02■□□□□ 0.48
SUDS3-204ENST00000543473 CHRDL2Q6WN34 429 aa18.02■□□□□ 0.48
SUDS3-204ENST00000543473 HOXB13Q92826 284 aaPredicted RBP18.02■□□□□ 0.48
SUDS3-204ENST00000543473 PEX11GQ96HA9 241 aa18.02■□□□□ 0.48
SUDS3-204ENST00000543473 A0A0A6YYJ9 748 aa18.02■□□□□ 0.48
SUDS3-204ENST00000543473 B4GALT3O60512 393 aa18.02■□□□□ 0.48
SUDS3-204ENST00000543473 PNMTP11086 282 aa18.02■□□□□ 0.48
SUDS3-204ENST00000543473 LUMP51884 338 aaPredicted RBP18.02■□□□□ 0.48
SUDS3-204ENST00000543473 TOR2AQ5JU69 321 aa18.02■□□□□ 0.48
SUDS3-204ENST00000543473 SLC16A9Q7RTY1 509 aa18.02■□□□□ 0.48
SUDS3-204ENST00000543473 PRICKLE2Q7Z3G6 844 aa18.02■□□□□ 0.48
SUDS3-204ENST00000543473 PTOV1Q86YD1 416 aa18.02■□□□□ 0.48
SUDS3-204ENST00000543473 TCTE3Q8IZS6 198 aa18.02■□□□□ 0.48
SUDS3-204ENST00000543473 DNAAF1Q8NEP3 725 aa18.02■□□□□ 0.48
SUDS3-204ENST00000543473 LINC01599Q8WXQ3 324 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms