RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 LSRQ86X29 649 aaPredicted RBP13.74□□□□□ -0.21
ECHDC2-223ENST00000542552 KRT73Q86Y46 540 aa13.74□□□□□ -0.21
ECHDC2-223ENST00000542552 HIPK4Q8NE63 616 aa13.74□□□□□ -0.21
ECHDC2-223ENST00000542552 DDIT4LQ96D03 193 aa13.74□□□□□ -0.21
ECHDC2-223ENST00000542552 WFIKKN1Q96NZ8 548 aa13.74□□□□□ -0.21
ECHDC2-223ENST00000542552 SPATA5L1Q9BVQ7 753 aa13.74□□□□□ -0.21
ECHDC2-223ENST00000542552 POTEKPQ9BYX7 375 aa13.74□□□□□ -0.21
ECHDC2-223ENST00000542552 CLEC4MQ9H2X3 399 aaPredicted RBP13.74□□□□□ -0.21
ECHDC2-223ENST00000542552 TMEM181Q9P2C4 612 aa13.74□□□□□ -0.21
ECHDC2-223ENST00000542552 AKAP6Q13023 2319 aa13.74□□□□□ -0.21
ECHDC2-223ENST00000542552 ZC3H12DA2A288 527 aaKnown RBP13.73□□□□□ -0.21
ECHDC2-223ENST00000542552 ZNF716A6NP11 495 aa13.73□□□□□ -0.21
ECHDC2-223ENST00000542552 FXYD1O00168 92 aa13.73□□□□□ -0.21
ECHDC2-223ENST00000542552 FRS3O43559 492 aa13.73□□□□□ -0.21
ECHDC2-223ENST00000542552 TPST1O60507 370 aa13.73□□□□□ -0.21
ECHDC2-223ENST00000542552 GCM2O75603 506 aaPredicted RBP13.73□□□□□ -0.21
ECHDC2-223ENST00000542552 NPPAP01160 153 aa13.73□□□□□ -0.21
ECHDC2-223ENST00000542552 IMPDH2P12268 514 aa13.73□□□□□ -0.21
ECHDC2-223ENST00000542552 KCNJ5P48544 419 aa13.73□□□□□ -0.21
ECHDC2-223ENST00000542552 GZMMP51124 257 aa13.73□□□□□ -0.21
ECHDC2-223ENST00000542552 COPZ1P61923 177 aa13.73□□□□□ -0.21
ECHDC2-223ENST00000542552 CAPRIN1Q14444 709 aaKnown RBP13.73□□□□□ -0.21
ECHDC2-223ENST00000542552 EXOC3L2Q2M3D2 409 aa13.73□□□□□ -0.21
ECHDC2-223ENST00000542552 TRMT5Q32P41 509 aaKnown RBP13.73□□□□□ -0.21
ECHDC2-223ENST00000542552 NANOGP8Q6NSW7 305 aa13.73□□□□□ -0.21
ECHDC2-223ENST00000542552 C22orf34Q6ZV56 151 aa13.73□□□□□ -0.21
ECHDC2-223ENST00000542552 STK32CQ86UX6 486 aa13.73□□□□□ -0.21
ECHDC2-223ENST00000542552 GABRG1Q8N1C3 465 aa13.73□□□□□ -0.21
ECHDC2-223ENST00000542552 C11orf65Q8NCR3 313 aa13.73□□□□□ -0.21
ECHDC2-223ENST00000542552 C3orf49Q96BT1 292 aa13.73□□□□□ -0.21
ECHDC2-223ENST00000542552 ZNF607Q96SK3 696 aa13.73□□□□□ -0.21
ECHDC2-223ENST00000542552 POLDIP3Q9BY77 421 aaKnown RBP13.73□□□□□ -0.21
ECHDC2-223ENST00000542552 C12orf49Q9H741 205 aa13.73□□□□□ -0.21
ECHDC2-223ENST00000542552 NANOGQ9H9S0 305 aa13.73□□□□□ -0.21
ECHDC2-223ENST00000542552 VPS13CQ709C8 3753 aa13.72□□□□□ -0.21
ECHDC2-223ENST00000542552 BBIP1A8MTZ0 92 aa13.72□□□□□ -0.21
ECHDC2-223ENST00000542552 TMEM229AB2RXF0 380 aa13.72□□□□□ -0.21
ECHDC2-223ENST00000542552 ZNF814B7Z6K7 855 aa13.72□□□□□ -0.21
ECHDC2-223ENST00000542552 SLC22A2O15244 555 aa13.72□□□□□ -0.21
ECHDC2-223ENST00000542552 NPIPB7O75200 414 aa13.72□□□□□ -0.21
ECHDC2-223ENST00000542552 MFN2O95140 757 aa13.72□□□□□ -0.21
ECHDC2-223ENST00000542552 HRGP04196 525 aa13.72□□□□□ -0.21
ECHDC2-223ENST00000542552 PSMB1P20618 241 aaKnown RBP13.72□□□□□ -0.21
ECHDC2-223ENST00000542552 CXCR1P25024 350 aa13.72□□□□□ -0.21
ECHDC2-223ENST00000542552 OR3A2P47893 321 aa13.72□□□□□ -0.21
ECHDC2-223ENST00000542552 SLC16A1P53985 500 aa13.72□□□□□ -0.21
ECHDC2-223ENST00000542552 HOXC5Q00444 222 aa13.72□□□□□ -0.21
ECHDC2-223ENST00000542552 CYLC2Q14093 348 aaPredicted RBP13.72□□□□□ -0.21
ECHDC2-223ENST00000542552 GLIPR1L2Q4G1C9 344 aa13.72□□□□□ -0.21
ECHDC2-223ENST00000542552 ATG4DQ86TL0 474 aaPredicted RBP13.72□□□□□ -0.21
ECHDC2-223ENST00000542552 CDC20BQ86Y33 519 aa13.72□□□□□ -0.21
ECHDC2-223ENST00000542552 CADM2Q8N3J6 435 aa13.72□□□□□ -0.21
ECHDC2-223ENST00000542552 LSMEM1Q8N8F7 131 aa13.72□□□□□ -0.21
ECHDC2-223ENST00000542552 LRRC58Q96CX6 371 aa13.72□□□□□ -0.21
ECHDC2-223ENST00000542552 ZHX1-C8orf76Q96EF9 292 aa13.72□□□□□ -0.21
ECHDC2-223ENST00000542552 DNAJA3Q96EY1 480 aa13.72□□□□□ -0.21
ECHDC2-223ENST00000542552 ZNF300Q96RE9 604 aaPredicted RBP13.72□□□□□ -0.21
ECHDC2-223ENST00000542552 KLHL4Q9C0H6 718 aa13.72□□□□□ -0.21
ECHDC2-223ENST00000542552 KLHL28Q9NXS3 571 aa13.72□□□□□ -0.21
ECHDC2-223ENST00000542552 ANGPT4Q9Y264 503 aa13.72□□□□□ -0.21
ECHDC2-223ENST00000542552 PRORSD1PA6NEY8 169 aa13.71□□□□□ -0.21
ECHDC2-223ENST00000542552 LIPT2A6NK58 231 aa13.71□□□□□ -0.21
ECHDC2-223ENST00000542552 A8MVM7 634 aa13.71□□□□□ -0.21
ECHDC2-223ENST00000542552 SIAH2O43255 324 aa13.71□□□□□ -0.21
ECHDC2-223ENST00000542552 EIF1BO60739 113 aaKnown RBP13.71□□□□□ -0.21
ECHDC2-223ENST00000542552 RAMP1O60894 148 aa13.71□□□□□ -0.21
ECHDC2-223ENST00000542552 SERPINB7O75635 380 aa13.71□□□□□ -0.21
ECHDC2-223ENST00000542552 PPP3CBP16298 524 aa13.71□□□□□ -0.21
ECHDC2-223ENST00000542552 FPR1P21462 350 aa13.71□□□□□ -0.21
ECHDC2-223ENST00000542552 CRYGSP22914 178 aa13.71□□□□□ -0.21
ECHDC2-223ENST00000542552 HTR2AP28223 471 aa13.71□□□□□ -0.21
ECHDC2-223ENST00000542552 AQP1P29972 269 aa13.71□□□□□ -0.21
ECHDC2-223ENST00000542552 OR2B6P58173 313 aa13.71□□□□□ -0.21
ECHDC2-223ENST00000542552 SLC35A1P78382 337 aa13.71□□□□□ -0.21
ECHDC2-223ENST00000542552 DMTNQ08495 405 aa13.71□□□□□ -0.21
ECHDC2-223ENST00000542552 MAPRE2Q15555 327 aa13.71□□□□□ -0.21
ECHDC2-223ENST00000542552 CYP51A1Q16850 503 aa13.71□□□□□ -0.21
ECHDC2-223ENST00000542552 REP15Q6BDI9 236 aa13.71□□□□□ -0.21
ECHDC2-223ENST00000542552 C6orf89Q6UWU4 347 aa13.71□□□□□ -0.21
ECHDC2-223ENST00000542552 SNX32Q86XE0 403 aa13.71□□□□□ -0.21
ECHDC2-223ENST00000542552 CALHM3Q86XJ0 350 aa13.71□□□□□ -0.21
ECHDC2-223ENST00000542552 ARMC8Q8IUR7 673 aa13.71□□□□□ -0.21
ECHDC2-223ENST00000542552 CCDC103Q8IW40 242 aa13.71□□□□□ -0.21
ECHDC2-223ENST00000542552 BHLHE22Q8NFJ8 381 aaPredicted RBP13.71□□□□□ -0.21
ECHDC2-223ENST00000542552 OR8J3Q8NGG0 315 aa13.71□□□□□ -0.21
ECHDC2-223ENST00000542552 PIGXQ8TBF5 258 aa13.71□□□□□ -0.21
ECHDC2-223ENST00000542552 NRGNQ92686 78 aa13.71□□□□□ -0.21
ECHDC2-223ENST00000542552 ZNF775Q96BV0 537 aaPredicted RBP13.71□□□□□ -0.21
ECHDC2-223ENST00000542552 MED18Q9BUE0 208 aa13.71□□□□□ -0.21
ECHDC2-223ENST00000542552 OR10A4Q9H209 315 aa13.71□□□□□ -0.21
ECHDC2-223ENST00000542552 C12orf10Q9HB07 376 aa13.71□□□□□ -0.21
ECHDC2-223ENST00000542552 FANCFQ9NPI8 374 aa13.71□□□□□ -0.21
ECHDC2-223ENST00000542552 GPR52Q9Y2T5 361 aa13.71□□□□□ -0.21
ECHDC2-223ENST00000542552 DEFB108AA8MXU0 73 aa13.7□□□□□ -0.22
ECHDC2-223ENST00000542552 MRASO14807 208 aa13.7□□□□□ -0.22
ECHDC2-223ENST00000542552 CASKO14936 926 aa13.7□□□□□ -0.22
ECHDC2-223ENST00000542552 TPST2O60704 377 aa13.7□□□□□ -0.22
ECHDC2-223ENST00000542552 THBDP07204 575 aa13.7□□□□□ -0.22
ECHDC2-223ENST00000542552 EDNRAP25101 427 aa13.7□□□□□ -0.22
ECHDC2-223ENST00000542552 DNAJA1P31689 397 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms