RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 SARGQ9BW04 601 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 UBQLN2Q9UHD9 624 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 PCDHGA5Q9Y5G8 931 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 TICRRQ7Z2Z1 1910 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 CTSVO60911 334 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 UBL3O95164 117 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 ACSM4P0C7M7 580 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 EDNRAP25101 427 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 PTBP1P26599 531 aaKnown RBP eCLIP9.55□□□□□ -0.882e-6■■□□□ 13
CDC42SE1-207ENST00000540998 LCN1P31025 176 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 ANXA11P50995 505 aaKnown RBP9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 HSF2Q03933 536 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 NRROSQ86YC3 692 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 ETFBKMTQ8IXQ9 262 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 FRMD1Q8N878 549 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 OR4C6Q8NH72 309 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 ADAMTS14Q8WXS8 1223 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 SLC25A38Q96DW6 304 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 NMNAT3Q96T66 252 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 TRAF4Q9BUZ4 470 aaPredicted RBP9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 TMEM168Q9H0V1 697 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 MTHFD2LQ9H903 347 aaPredicted RBP9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 HRASLSQ9HDD0 168 aa9.55□□□□□ -0.88
CDC42SE1-207ENST00000540998 VPS13AQ96RL7 3174 aa9.54□□□□□ -0.88
CDC42SE1-207ENST00000540998 FAM86C2PA6NEL3 165 aa9.54□□□□□ -0.88
CDC42SE1-207ENST00000540998 RIIAD1A6NNX1 92 aa9.54□□□□□ -0.88
CDC42SE1-207ENST00000540998 MCIDASD6RGH6 385 aa9.54□□□□□ -0.88
CDC42SE1-207ENST00000540998 FMO6PO60774 539 aa9.54□□□□□ -0.88
CDC42SE1-207ENST00000540998 NT5EP21589 574 aa9.54□□□□□ -0.88
CDC42SE1-207ENST00000540998 SEC13P55735 322 aa9.54□□□□□ -0.88
CDC42SE1-207ENST00000540998 NANOS3P60323 173 aaKnown RBP9.54□□□□□ -0.88
CDC42SE1-207ENST00000540998 LINC00303Q3SY05 128 aa9.54□□□□□ -0.88
CDC42SE1-207ENST00000540998 DCST2Q5T1A1 773 aa9.54□□□□□ -0.88
CDC42SE1-207ENST00000540998 HEPHL1Q6MZM0 1159 aa9.54□□□□□ -0.88
CDC42SE1-207ENST00000540998 PSRC1Q6PGN9 363 aaPredicted RBP9.54□□□□□ -0.88
CDC42SE1-207ENST00000540998 ADAMTSL4Q6UY14 1074 aa9.54□□□□□ -0.88
CDC42SE1-207ENST00000540998 ZNF765Q7L2R6 523 aa9.54□□□□□ -0.88
CDC42SE1-207ENST00000540998 UBE2Q1Q7Z7E8 422 aa9.54□□□□□ -0.88
CDC42SE1-207ENST00000540998 COX18Q8N8Q8 333 aa9.54□□□□□ -0.88
CDC42SE1-207ENST00000540998 HAVCR2Q8TDQ0 301 aa9.54□□□□□ -0.88
CDC42SE1-207ENST00000540998 ZNF296Q8WUU4 475 aaPredicted RBP9.54□□□□□ -0.88
CDC42SE1-207ENST00000540998 RASD2Q96D21 266 aa9.54□□□□□ -0.88
CDC42SE1-207ENST00000540998 SIPA1Q96FS4 1042 aa9.54□□□□□ -0.88
CDC42SE1-207ENST00000540998 MS4A4EQ96PG1 132 aa9.54□□□□□ -0.88
CDC42SE1-207ENST00000540998 PCBD2Q9H0N5 130 aa9.54□□□□□ -0.88
CDC42SE1-207ENST00000540998 MED17Q9NVC6 651 aa9.54□□□□□ -0.88
CDC42SE1-207ENST00000540998 TBX21Q9UL17 535 aa9.54□□□□□ -0.88
CDC42SE1-207ENST00000540998 IER3IP1Q9Y5U9 82 aa9.54□□□□□ -0.88
CDC42SE1-207ENST00000540998 ASCC3Q8N3C0 2202 aaKnown RBP9.54□□□□□ -0.88
CDC42SE1-207ENST00000540998 H0YC42 278 aa9.54□□□□□ -0.88
CDC42SE1-207ENST00000540998 HRKO00198 91 aa9.54□□□□□ -0.88
CDC42SE1-207ENST00000540998 FGF17O60258 216 aa9.54□□□□□ -0.88
CDC42SE1-207ENST00000540998 RAD1O60671 282 aa9.54□□□□□ -0.88
CDC42SE1-207ENST00000540998 CDC123O75794 336 aaPredicted RBP9.54□□□□□ -0.88
CDC42SE1-207ENST00000540998 SLC2A5P22732 501 aa9.54□□□□□ -0.88
CDC42SE1-207ENST00000540998 BMP8BP34820 402 aa9.54□□□□□ -0.88
CDC42SE1-207ENST00000540998 GABRA3P34903 492 aa9.54□□□□□ -0.88
CDC42SE1-207ENST00000540998 CCR9P51686 369 aa9.54□□□□□ -0.88
CDC42SE1-207ENST00000540998 TUSC1Q2TAM9 212 aa9.54□□□□□ -0.88
CDC42SE1-207ENST00000540998 TMEM35AQ53FP2 167 aa9.54□□□□□ -0.88
CDC42SE1-207ENST00000540998 AGBL4Q5VU57 503 aa9.54□□□□□ -0.88
CDC42SE1-207ENST00000540998 BTN2A1Q7KYR7 527 aa9.54□□□□□ -0.88
CDC42SE1-207ENST00000540998 BMP8AQ7Z5Y6 402 aa9.54□□□□□ -0.88
CDC42SE1-207ENST00000540998 RANBP3LQ86VV4 465 aaPredicted RBP9.54□□□□□ -0.88
CDC42SE1-207ENST00000540998 ZNF761Q86XN6 746 aaPredicted RBP9.54□□□□□ -0.88
CDC42SE1-207ENST00000540998 STPG2Q8N412 459 aa9.54□□□□□ -0.88
CDC42SE1-207ENST00000540998 TMIEQ8NEW7 156 aa9.54□□□□□ -0.88
CDC42SE1-207ENST00000540998 SNX33Q8WV41 574 aa9.54□□□□□ -0.88
CDC42SE1-207ENST00000540998 FOXN4Q96NZ1 517 aa9.54□□□□□ -0.88
CDC42SE1-207ENST00000540998 MCCC2Q9HCC0 563 aa9.54□□□□□ -0.88
CDC42SE1-207ENST00000540998 CD93Q9NPY3 652 aa9.54□□□□□ -0.88
CDC42SE1-207ENST00000540998 TBC1D29Q9UFV1 150 aa9.54□□□□□ -0.88
CDC42SE1-207ENST00000540998 SLC22A31A6NKX4 558 aa9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 RNGTTO60942 597 aaKnown RBP9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 KHDRBS3O75525 346 aaKnown RBP9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 GPANK1O95872 356 aa9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 POLR2CP19387 275 aaPredicted RBP9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 MMP15P51511 669 aa9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 TRA2BP62995 288 aaKnown RBP9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 OPCMLQ14982 345 aa9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 COL28A1Q2UY09 1125 aa9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 TMEM52BQ4KMG9 183 aa9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 HDDC3Q8N4P3 179 aa9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 MRPL43Q8N983 215 aaKnown RBP9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 ZNF511Q8NB15 262 aa9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 OR4D10Q8NGI6 311 aa9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 OR5M1Q8NGP8 315 aa9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 MOSPD2Q8NHP6 518 aa9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 PATE1Q8WXA2 126 aa9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 CAPNS2Q96L46 248 aa9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 LIN7BQ9HAP6 207 aa9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 FGF22Q9HCT0 170 aa9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 PIPOXQ9P0Z9 390 aa9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 ING1Q9UK53 422 aaPredicted RBP9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 CXorf51AA0A1B0GTR3 108 aa9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 ABHD14A-ACY1A0A1B0GW23 586 aa9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 A0A1B0GWA3 101 aa9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 H7C1C5 153 aa9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 TRIM77I1YAP6 450 aa9.53□□□□□ -0.88
CDC42SE1-207ENST00000540998 ARPC5O15511 151 aa9.53□□□□□ -0.88
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