RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 FAM69AQ5T7M9 428 aa11.32□□□□□ -0.6
NPC1-202ENST00000540608 UNQ9370/PRO34162Q6UXP9 181 aa11.32□□□□□ -0.6
NPC1-202ENST00000540608 ZNF527Q8NB42 609 aa11.32□□□□□ -0.6
NPC1-202ENST00000540608 OR52E2Q8NGJ4 325 aa11.32□□□□□ -0.6
NPC1-202ENST00000540608 ZNF671Q8TAW3 534 aa11.32□□□□□ -0.6
NPC1-202ENST00000540608 DACT3Q96B18 629 aaPredicted RBP11.32□□□□□ -0.6
NPC1-202ENST00000540608 ZMYND19Q96E35 227 aaPredicted RBP11.32□□□□□ -0.6
NPC1-202ENST00000540608 ORAI3Q9BRQ5 295 aa11.32□□□□□ -0.6
NPC1-202ENST00000540608 ZNF426Q9BUY5 554 aa11.32□□□□□ -0.6
NPC1-202ENST00000540608 ZNF436Q9C0F3 470 aaPredicted RBP11.32□□□□□ -0.6
NPC1-202ENST00000540608 C20orf85Q9H1P6 137 aa11.32□□□□□ -0.6
NPC1-202ENST00000540608 PLEKHA1Q9HB21 404 aa11.32□□□□□ -0.6
NPC1-202ENST00000540608 FLRT3Q9NZU0 649 aa11.32□□□□□ -0.6
NPC1-202ENST00000540608 TBC1D29Q9UFV1 150 aa11.32□□□□□ -0.6
NPC1-202ENST00000540608 ATG2BQ96BY7 2078 aa11.32□□□□□ -0.6
NPC1-202ENST00000540608 A0A1B0GWA3 101 aa11.32□□□□□ -0.6
NPC1-202ENST00000540608 A0A1W2PQU0 124 aa11.32□□□□□ -0.6
NPC1-202ENST00000540608 PEX14O75381 377 aa11.32□□□□□ -0.6
NPC1-202ENST00000540608 ITGA10O75578 1167 aa11.32□□□□□ -0.6
NPC1-202ENST00000540608 MPC2O95563 127 aa11.32□□□□□ -0.6
NPC1-202ENST00000540608 EML2O95834 649 aa11.32□□□□□ -0.6
NPC1-202ENST00000540608 HPXP02790 462 aa11.32□□□□□ -0.6
NPC1-202ENST00000540608 ENPP1P22413 925 aa11.32□□□□□ -0.6
NPC1-202ENST00000540608 RBM34P42696 430 aaKnown RBP11.32□□□□□ -0.6
NPC1-202ENST00000540608 ZP1P60852 638 aa11.32□□□□□ -0.6
NPC1-202ENST00000540608 POU6F2P78424 691 aaPredicted RBP11.32□□□□□ -0.6
NPC1-202ENST00000540608 EXOSC2Q13868 293 aaKnown RBP11.32□□□□□ -0.6
NPC1-202ENST00000540608 GGTLC2Q14390 218 aa11.32□□□□□ -0.6
NPC1-202ENST00000540608 POU4F3Q15319 338 aa11.32□□□□□ -0.6
NPC1-202ENST00000540608 MTFR2Q6P444 385 aa11.32□□□□□ -0.6
NPC1-202ENST00000540608 SEZ6L2Q6UXD5 910 aa11.32□□□□□ -0.6
NPC1-202ENST00000540608 UBE2Q1Q7Z7E8 422 aa11.32□□□□□ -0.6
NPC1-202ENST00000540608 SLC38A6Q8IZM9 456 aa11.32□□□□□ -0.6
NPC1-202ENST00000540608 CMTM4Q8IZR5 234 aa11.32□□□□□ -0.6
NPC1-202ENST00000540608 POMGNT2Q8NAT1 580 aa11.32□□□□□ -0.6
NPC1-202ENST00000540608 FLVCR1-AS1Q8TAF5 88 aa11.32□□□□□ -0.6
NPC1-202ENST00000540608 LGALS14Q8TCE9 139 aa11.32□□□□□ -0.6
NPC1-202ENST00000540608 HERVK_113Q902F9 699 aa11.32□□□□□ -0.6
NPC1-202ENST00000540608 PHYHIPQ92561 330 aa11.32□□□□□ -0.6
NPC1-202ENST00000540608 CNOT9Q92600 299 aaKnown RBP11.32□□□□□ -0.6
NPC1-202ENST00000540608 ARSGQ96EG1 525 aa11.32□□□□□ -0.6
NPC1-202ENST00000540608 LRFN5Q96NI6 719 aa11.32□□□□□ -0.6
NPC1-202ENST00000540608 ERMAPQ96PL5 475 aaPredicted RBP11.32□□□□□ -0.6
NPC1-202ENST00000540608 CNN2Q99439 309 aaKnown RBP11.32□□□□□ -0.6
NPC1-202ENST00000540608 TTTY10Q9BZA0 68 aa11.32□□□□□ -0.6
NPC1-202ENST00000540608 SPRTNQ9H040 489 aaPredicted RBP11.32□□□□□ -0.6
NPC1-202ENST00000540608 SRMSQ9H3Y6 488 aa11.32□□□□□ -0.6
NPC1-202ENST00000540608 CERS4Q9HA82 394 aa11.32□□□□□ -0.6
NPC1-202ENST00000540608 LYRM4Q9HD34 91 aa11.32□□□□□ -0.6
NPC1-202ENST00000540608 POLE3Q9NRF9 147 aa11.32□□□□□ -0.6
NPC1-202ENST00000540608 CHRNA9Q9UGM1 479 aa11.32□□□□□ -0.6
NPC1-202ENST00000540608 UBQLN2Q9UHD9 624 aa11.32□□□□□ -0.6
NPC1-202ENST00000540608 NUP50Q9UKX7 468 aa11.32□□□□□ -0.6
NPC1-202ENST00000540608 TRBV2A0A0J9YWF9 115 aa11.31□□□□□ -0.6
NPC1-202ENST00000540608 RPS10-NUDT3A0A1W2PQS6 291 aa11.31□□□□□ -0.6
NPC1-202ENST00000540608 GXYLT2A0PJZ3 443 aa11.31□□□□□ -0.6
NPC1-202ENST00000540608 KHNYNO15037 678 aaKnown RBP11.31□□□□□ -0.6
NPC1-202ENST00000540608 TNFSF14O43557 240 aa11.31□□□□□ -0.6
NPC1-202ENST00000540608 CTSVO60911 334 aa11.31□□□□□ -0.6
NPC1-202ENST00000540608 LDB3O75112 727 aa11.31□□□□□ -0.6
NPC1-202ENST00000540608 TGM6O95932 706 aa11.31□□□□□ -0.6
NPC1-202ENST00000540608 ZNF10P21506 573 aaPredicted RBP11.31□□□□□ -0.6
NPC1-202ENST00000540608 SSTR2P30874 369 aa11.31□□□□□ -0.6
NPC1-202ENST00000540608 MAT2AP31153 395 aaKnown RBP11.31□□□□□ -0.6
NPC1-202ENST00000540608 CCR9P51686 369 aa11.31□□□□□ -0.6
NPC1-202ENST00000540608 ENPP2Q13822 863 aa11.31□□□□□ -0.6
NPC1-202ENST00000540608 PRICKLE4Q2TBC4 344 aa11.31□□□□□ -0.6
NPC1-202ENST00000540608 ABHD13Q7L211 337 aa11.31□□□□□ -0.6
NPC1-202ENST00000540608 IZUMO1Q8IYV9 350 aa11.31□□□□□ -0.6
NPC1-202ENST00000540608 PHOSPHO2Q8TCD6 241 aa11.31□□□□□ -0.6
NPC1-202ENST00000540608 SNX33Q8WV41 574 aa11.31□□□□□ -0.6
NPC1-202ENST00000540608 OR14A2Q96R54 314 aa11.31□□□□□ -0.6
NPC1-202ENST00000540608 MYADMQ96S97 322 aa11.31□□□□□ -0.6
NPC1-202ENST00000540608 SLC6A17Q9H1V8 727 aa11.31□□□□□ -0.6
NPC1-202ENST00000540608 AUNIPQ9H7T9 357 aa11.31□□□□□ -0.6
NPC1-202ENST00000540608 IL21RQ9HBE5 538 aa11.31□□□□□ -0.6
NPC1-202ENST00000540608 FGF22Q9HCT0 170 aa11.31□□□□□ -0.6
NPC1-202ENST00000540608 AKAP7Q9P0M2 348 aaPredicted RBP11.31□□□□□ -0.6
NPC1-202ENST00000540608 A0A1B0GTQ1 180 aa11.31□□□□□ -0.6
NPC1-202ENST00000540608 FGF17O60258 216 aa11.31□□□□□ -0.6
NPC1-202ENST00000540608 NGFRP08138 427 aa11.31□□□□□ -0.6
NPC1-202ENST00000540608 HIST1H1CP16403 213 aaKnown RBP11.31□□□□□ -0.6
NPC1-202ENST00000540608 SRMP19623 302 aa11.31□□□□□ -0.6
NPC1-202ENST00000540608 SEC13P55735 322 aa11.31□□□□□ -0.6
NPC1-202ENST00000540608 PUDPQ08623 228 aa11.31□□□□□ -0.6
NPC1-202ENST00000540608 MGAT2Q10469 447 aa11.31□□□□□ -0.6
NPC1-202ENST00000540608 NLRC3Q7RTR2 1065 aa11.31□□□□□ -0.6
NPC1-202ENST00000540608 SLC35F2Q8IXU6 374 aa11.31□□□□□ -0.6
NPC1-202ENST00000540608 OR4K13Q8NH42 304 aa11.31□□□□□ -0.6
NPC1-202ENST00000540608 OR2M4Q96R27 311 aa11.31□□□□□ -0.6
NPC1-202ENST00000540608 SMAD5Q99717 465 aaKnown RBP11.31□□□□□ -0.6
NPC1-202ENST00000540608 BEX1Q9HBH7 125 aa11.31□□□□□ -0.6
NPC1-202ENST00000540608 HRASLSQ9HDD0 168 aa11.31□□□□□ -0.6
NPC1-202ENST00000540608 NANSQ9NR45 359 aa11.31□□□□□ -0.6
NPC1-202ENST00000540608 RPS6KB2Q9UBS0 482 aa11.31□□□□□ -0.6
NPC1-202ENST00000540608 SPEF1Q9Y4P9 236 aa11.31□□□□□ -0.6
NPC1-202ENST00000540608 OR5K3A6NET4 321 aa11.3□□□□□ -0.6
NPC1-202ENST00000540608 ZNF879B4DU55 563 aa11.3□□□□□ -0.6
NPC1-202ENST00000540608 G3V3Q6 166 aa11.3□□□□□ -0.6
NPC1-202ENST00000540608 TPD52L2O43399 206 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms