RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 TMIGD3P0DMS9 266 aaPredicted RBP12.84□□□□□ -0.35
SCNN1A-215ENST00000540037 TM4SF4P48230 202 aa12.84□□□□□ -0.35
SCNN1A-215ENST00000540037 PLAURQ03405 335 aa12.84□□□□□ -0.35
SCNN1A-215ENST00000540037 CDK5R1Q15078 307 aa12.84□□□□□ -0.35
SCNN1A-215ENST00000540037 GXYLT1Q4G148 440 aa12.84□□□□□ -0.35
SCNN1A-215ENST00000540037 MEIOBQ8N635 442 aa12.84□□□□□ -0.35
SCNN1A-215ENST00000540037 OR5M1Q8NGP8 315 aa12.84□□□□□ -0.35
SCNN1A-215ENST00000540037 SMIM19Q96E16 107 aa12.84□□□□□ -0.35
SCNN1A-215ENST00000540037 CA5BQ9Y2D0 317 aa12.84□□□□□ -0.35
SCNN1A-215ENST00000540037 HIDE1A8MVS5 230 aa12.83□□□□□ -0.35
SCNN1A-215ENST00000540037 FMO6PO60774 539 aa12.83□□□□□ -0.35
SCNN1A-215ENST00000540037 ADAM11O75078 769 aa12.83□□□□□ -0.35
SCNN1A-215ENST00000540037 PCDH8O95206 1070 aa12.83□□□□□ -0.35
SCNN1A-215ENST00000540037 RHOP08100 348 aa12.83□□□□□ -0.35
SCNN1A-215ENST00000540037 EDNRAP25101 427 aa12.83□□□□□ -0.35
SCNN1A-215ENST00000540037 MAT2AP31153 395 aaKnown RBP12.83□□□□□ -0.35
SCNN1A-215ENST00000540037 PLA2G7Q13093 441 aa12.83□□□□□ -0.35
SCNN1A-215ENST00000540037 HLXQ14774 488 aaPredicted RBP12.83□□□□□ -0.35
SCNN1A-215ENST00000540037 TRAM1Q15629 374 aa12.83□□□□□ -0.35
SCNN1A-215ENST00000540037 TMEM35AQ53FP2 167 aa12.83□□□□□ -0.35
SCNN1A-215ENST00000540037 HSD17B12Q53GQ0 312 aa12.83□□□□□ -0.35
SCNN1A-215ENST00000540037 UBE2NLQ5JXB2 153 aa12.83□□□□□ -0.35
SCNN1A-215ENST00000540037 ERN2Q76MJ5 926 aaKnown RBP12.83□□□□□ -0.35
SCNN1A-215ENST00000540037 HDDC2Q7Z4H3 204 aa12.83□□□□□ -0.35
SCNN1A-215ENST00000540037 UBE2Q1Q7Z7E8 422 aa12.83□□□□□ -0.35
SCNN1A-215ENST00000540037 OR52E2Q8NGJ4 325 aa12.83□□□□□ -0.35
SCNN1A-215ENST00000540037 PTCHD1Q96NR3 888 aa12.83□□□□□ -0.35
SCNN1A-215ENST00000540037 HMX1Q9NP08 348 aaPredicted RBP12.83□□□□□ -0.35
SCNN1A-215ENST00000540037 ADAP2Q9NPF8 381 aa12.83□□□□□ -0.35
SCNN1A-215ENST00000540037 ZC4H2Q9NQZ6 224 aa12.83□□□□□ -0.35
SCNN1A-215ENST00000540037 SLC35A3Q9Y2D2 325 aa12.83□□□□□ -0.35
SCNN1A-215ENST00000540037 MYO15AQ9UKN7 3530 aa12.83□□□□□ -0.36
SCNN1A-215ENST00000540037 REV3LO60673 3130 aa12.83□□□□□ -0.36
SCNN1A-215ENST00000540037 FGF18O76093 207 aa12.83□□□□□ -0.36
SCNN1A-215ENST00000540037 RPN2P04844 631 aa12.83□□□□□ -0.36
SCNN1A-215ENST00000540037 NGFRP08138 427 aa12.83□□□□□ -0.36
SCNN1A-215ENST00000540037 PEBP1P30086 187 aaKnown RBP12.83□□□□□ -0.36
SCNN1A-215ENST00000540037 ARHGDIBP52566 201 aa12.83□□□□□ -0.36
SCNN1A-215ENST00000540037 TAS2R43P59537 309 aa12.83□□□□□ -0.36
SCNN1A-215ENST00000540037 METTL11BQ5VVY1 283 aa12.83□□□□□ -0.36
SCNN1A-215ENST00000540037 GLDNQ6ZMI3 551 aaPredicted RBP12.83□□□□□ -0.36
SCNN1A-215ENST00000540037 RANBP3LQ86VV4 465 aaPredicted RBP12.83□□□□□ -0.36
SCNN1A-215ENST00000540037 CXorf40AQ8TE69 158 aa12.83□□□□□ -0.36
SCNN1A-215ENST00000540037 MOAP1Q96BY2 351 aa12.83□□□□□ -0.36
SCNN1A-215ENST00000540037 ZBP1Q9H171 429 aa12.83□□□□□ -0.36
SCNN1A-215ENST00000540037 C2orf42Q9NWW7 574 aa12.83□□□□□ -0.36
SCNN1A-215ENST00000540037 ING1Q9UK53 422 aaPredicted RBP12.83□□□□□ -0.36
SCNN1A-215ENST00000540037 ZNF346Q9UL40 294 aaKnown RBP12.83□□□□□ -0.36
SCNN1A-215ENST00000540037 FAM171A2A8MVW0 826 aa12.83□□□□□ -0.36
SCNN1A-215ENST00000540037 GLULP15104 373 aa12.83□□□□□ -0.36
SCNN1A-215ENST00000540037 CD53P19397 219 aa12.83□□□□□ -0.36
SCNN1A-215ENST00000540037 SRMP19623 302 aa12.83□□□□□ -0.36
SCNN1A-215ENST00000540037 HOXD10P28358 340 aa12.83□□□□□ -0.36
SCNN1A-215ENST00000540037 P2RY2P41231 377 aa12.83□□□□□ -0.36
SCNN1A-215ENST00000540037 RANBP2P49792 3224 aaKnown RBP12.83□□□□□ -0.36
SCNN1A-215ENST00000540037 SIRPAP78324 504 aa12.83□□□□□ -0.36
SCNN1A-215ENST00000540037 ZNF273Q14593 569 aa12.83□□□□□ -0.36
SCNN1A-215ENST00000540037 CSRP2Q16527 193 aa12.83□□□□□ -0.36
SCNN1A-215ENST00000540037 ZC3H14Q6PJT7 736 aaKnown RBP12.83□□□□□ -0.36
SCNN1A-215ENST00000540037 ZNF765Q7L2R6 523 aa12.83□□□□□ -0.36
SCNN1A-215ENST00000540037 ZAR1Q86SH2 424 aa12.83□□□□□ -0.36
SCNN1A-215ENST00000540037 ALPK2Q86TB3 2170 aa12.83□□□□□ -0.36
SCNN1A-215ENST00000540037 TEX19Q8NA77 164 aa12.83□□□□□ -0.36
SCNN1A-215ENST00000540037 C10orf90Q96M02 699 aa12.83□□□□□ -0.36
SCNN1A-215ENST00000540037 C7orf50Q9BRJ6 194 aaKnown RBP12.83□□□□□ -0.36
SCNN1A-215ENST00000540037 ZCCHC4Q9H5U6 513 aa12.83□□□□□ -0.36
SCNN1A-215ENST00000540037 INPP5EQ9NRR6 644 aa12.83□□□□□ -0.36
SCNN1A-215ENST00000540037 A0A1B0GUH1 482 aa12.82□□□□□ -0.36
SCNN1A-215ENST00000540037 C4orf47A7E2U8 309 aa12.82□□□□□ -0.36
SCNN1A-215ENST00000540037 GALR3O60755 368 aaPredicted RBP12.82□□□□□ -0.36
SCNN1A-215ENST00000540037 RCBTB2O95199 551 aa12.82□□□□□ -0.36
SCNN1A-215ENST00000540037 PTH2RP49190 550 aa12.82□□□□□ -0.36
SCNN1A-215ENST00000540037 RAB28P51157 221 aa12.82□□□□□ -0.36
SCNN1A-215ENST00000540037 H2BFSP57053 126 aa12.82□□□□□ -0.36
SCNN1A-215ENST00000540037 KRT33BQ14525 404 aa12.82□□□□□ -0.36
SCNN1A-215ENST00000540037 ZNF614Q8N883 585 aa12.82□□□□□ -0.36
SCNN1A-215ENST00000540037 DNAAF1Q8NEP3 725 aa12.82□□□□□ -0.36
SCNN1A-215ENST00000540037 OR52E1Q8NGJ3 308 aa12.82□□□□□ -0.36
SCNN1A-215ENST00000540037 ZPLD1Q8TCW7 415 aa12.82□□□□□ -0.36
SCNN1A-215ENST00000540037 THEM6Q8WUY1 208 aa12.82□□□□□ -0.36
SCNN1A-215ENST00000540037 OTUB2Q96DC9 234 aa12.82□□□□□ -0.36
SCNN1A-215ENST00000540037 TSPAN10Q9H1Z9 355 aaPredicted RBP12.82□□□□□ -0.36
SCNN1A-215ENST00000540037 KRCC1Q9NPI7 259 aaPredicted RBP12.82□□□□□ -0.36
SCNN1A-215ENST00000540037 NRIP3Q9NQ35 241 aa12.82□□□□□ -0.36
SCNN1A-215ENST00000540037 GPR160Q9UJ42 338 aa12.82□□□□□ -0.36
SCNN1A-215ENST00000540037 ADAM18Q9Y3Q7 739 aa12.82□□□□□ -0.36
SCNN1A-215ENST00000540037 CACNA1CQ13936 2221 aa12.82□□□□□ -0.36
SCNN1A-215ENST00000540037 FXYD6-FXYD2A0A087WZ82 144 aa12.82□□□□□ -0.36
SCNN1A-215ENST00000540037 SELENOFO60613 162 aa12.82□□□□□ -0.36
SCNN1A-215ENST00000540037 LAMP2P13473 410 aa12.82□□□□□ -0.36
SCNN1A-215ENST00000540037 HIST1H1CP16403 213 aaKnown RBP12.82□□□□□ -0.36
SCNN1A-215ENST00000540037 ZNF3P17036 446 aa12.82□□□□□ -0.36
SCNN1A-215ENST00000540037 OR2L3Q8NG85 312 aa12.82□□□□□ -0.36
SCNN1A-215ENST00000540037 ZCCHC10Q8TBK6 192 aa12.82□□□□□ -0.36
SCNN1A-215ENST00000540037 SNX33Q8WV41 574 aa12.82□□□□□ -0.36
SCNN1A-215ENST00000540037 MARC2Q969Z3 335 aa12.82□□□□□ -0.36
SCNN1A-215ENST00000540037 MS4A4EQ96PG1 132 aa12.82□□□□□ -0.36
SCNN1A-215ENST00000540037 FXYD6Q9H0Q3 95 aa12.82□□□□□ -0.36
SCNN1A-215ENST00000540037 INSL6Q9Y581 213 aa12.82□□□□□ -0.36
SCNN1A-215ENST00000540037 SZT2Q5T011 3432 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms