RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 OR52I1Q8NGK6 324 aa9.27□□□□□ -0.93
TRAF1-202ENST00000540010 PRRG4Q9BZD6 226 aa9.27□□□□□ -0.93
TRAF1-202ENST00000540010 NT5DC2Q9H857 520 aa9.27□□□□□ -0.93
TRAF1-202ENST00000540010 LMAN1LQ9HAT1 526 aa9.27□□□□□ -0.93
TRAF1-202ENST00000540010 PLSCR3Q9NRY6 295 aa9.27□□□□□ -0.93
TRAF1-202ENST00000540010 EXO1Q9UQ84 846 aaKnown RBP9.27□□□□□ -0.93
TRAF1-202ENST00000540010 MEMO1Q9Y316 297 aa9.27□□□□□ -0.93
TRAF1-202ENST00000540010 LRIT2A6NDA9 550 aa9.26□□□□□ -0.93
TRAF1-202ENST00000540010 MAN2B1O00754 1011 aa9.26□□□□□ -0.93
TRAF1-202ENST00000540010 GOSR2O14653 212 aa9.26□□□□□ -0.93
TRAF1-202ENST00000540010 CDC40O60508 579 aaKnown RBP eCLIP9.26□□□□□ -0.93
TRAF1-202ENST00000540010 PPM1BO75688 479 aa9.26□□□□□ -0.93
TRAF1-202ENST00000540010 IFNA21P01568 189 aa9.26□□□□□ -0.93
TRAF1-202ENST00000540010 GABRA5P31644 462 aa9.26□□□□□ -0.93
TRAF1-202ENST00000540010 RPS5P46782 204 aaKnown RBP9.26□□□□□ -0.93
TRAF1-202ENST00000540010 PXNP49023 591 aaPredicted RBP9.26□□□□□ -0.93
TRAF1-202ENST00000540010 YPEL5P62699 121 aa9.26□□□□□ -0.93
TRAF1-202ENST00000540010 TSPAN31Q12999 210 aa9.26□□□□□ -0.93
TRAF1-202ENST00000540010 FCRLAQ7L513 359 aa9.26□□□□□ -0.93
TRAF1-202ENST00000540010 FAM109AQ8N4B1 249 aa9.26□□□□□ -0.93
TRAF1-202ENST00000540010 OR7G1Q8NGA0 311 aa9.26□□□□□ -0.93
TRAF1-202ENST00000540010 OR13C2Q8NGS9 318 aa9.26□□□□□ -0.93
TRAF1-202ENST00000540010 OR5AK2Q8NH90 309 aa9.26□□□□□ -0.93
TRAF1-202ENST00000540010 STOML3Q8TAV4 291 aa9.26□□□□□ -0.93
TRAF1-202ENST00000540010 CPNE2Q96FN4 548 aaPredicted RBP9.26□□□□□ -0.93
TRAF1-202ENST00000540010 MFFQ9GZY8 342 aa9.26□□□□□ -0.93
TRAF1-202ENST00000540010 KIR3DX1Q9H7L2 352 aa9.26□□□□□ -0.93
TRAF1-202ENST00000540010 SLC6A20Q9NP91 592 aa9.26□□□□□ -0.93
TRAF1-202ENST00000540010 KLRF1Q9NZS2 232 aa9.26□□□□□ -0.93
TRAF1-202ENST00000540010 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.26□□□□□ -0.93
TRAF1-202ENST00000540010 DOCK9Q9BZ29 2069 aa9.26□□□□□ -0.93
TRAF1-202ENST00000540010 A0A1B0GVI7 797 aa9.26□□□□□ -0.93
TRAF1-202ENST00000540010 EML2O95834 649 aa9.26□□□□□ -0.93
TRAF1-202ENST00000540010 CHRNB1P11230 501 aa9.26□□□□□ -0.93
TRAF1-202ENST00000540010 APEHP13798 732 aaKnown RBP9.26□□□□□ -0.93
TRAF1-202ENST00000540010 PRSS3P35030 304 aa9.26□□□□□ -0.93
TRAF1-202ENST00000540010 LTB4RQ15722 352 aa9.26□□□□□ -0.93
TRAF1-202ENST00000540010 PUS10Q3MIT2 529 aaKnown RBP9.26□□□□□ -0.93
TRAF1-202ENST00000540010 ACSM5Q6NUN0 579 aa9.26□□□□□ -0.93
TRAF1-202ENST00000540010 DNM1P34Q6PK57 102 aa9.26□□□□□ -0.93
TRAF1-202ENST00000540010 OR6N1Q8NGY5 312 aa9.26□□□□□ -0.93
TRAF1-202ENST00000540010 GHSRQ92847 366 aa9.26□□□□□ -0.93
TRAF1-202ENST00000540010 MS4A4EQ96PG1 132 aa9.26□□□□□ -0.93
TRAF1-202ENST00000540010 PHF7Q9BWX1 381 aaPredicted RBP9.26□□□□□ -0.93
TRAF1-202ENST00000540010 UBE2ZQ9H832 354 aaPredicted RBP9.26□□□□□ -0.93
TRAF1-202ENST00000540010 AKIP1Q9NQ31 210 aa9.26□□□□□ -0.93
TRAF1-202ENST00000540010 NUBP2Q9Y5Y2 271 aa9.26□□□□□ -0.93
TRAF1-202ENST00000540010 C2orf74A8MZ97 194 aa9.26□□□□□ -0.93
TRAF1-202ENST00000540010 FARS2O95363 451 aaKnown RBP9.26□□□□□ -0.93
TRAF1-202ENST00000540010 PROS1P07225 676 aa9.26□□□□□ -0.93
TRAF1-202ENST00000540010 HOXB3P14651 431 aaPredicted RBP9.26□□□□□ -0.93
TRAF1-202ENST00000540010 S100GP29377 79 aa9.26□□□□□ -0.93
TRAF1-202ENST00000540010 LSSP48449 732 aa9.26□□□□□ -0.93
TRAF1-202ENST00000540010 CCR6P51684 374 aa9.26□□□□□ -0.93
TRAF1-202ENST00000540010 RPS15AP62244 130 aaKnown RBP9.26□□□□□ -0.93
TRAF1-202ENST00000540010 POU4F2Q12837 409 aa9.26□□□□□ -0.93
TRAF1-202ENST00000540010 TDGQ13569 410 aa9.26□□□□□ -0.93
TRAF1-202ENST00000540010 PDE7AQ13946 482 aa9.26□□□□□ -0.93
TRAF1-202ENST00000540010 ARHGAP40Q5TG30 622 aa9.26□□□□□ -0.93
TRAF1-202ENST00000540010 APOOLQ6UXV4 268 aa9.26□□□□□ -0.93
TRAF1-202ENST00000540010 KLHDC7BQ96G42 594 aa9.26□□□□□ -0.93
TRAF1-202ENST00000540010 SIRT5Q9NXA8 310 aa9.26□□□□□ -0.93
TRAF1-202ENST00000540010 MUTYHQ9UIF7 546 aa9.26□□□□□ -0.93
TRAF1-202ENST00000540010 TMEFF2Q9UIK5 374 aaPredicted RBP9.26□□□□□ -0.93
TRAF1-202ENST00000540010 TMEM14AQ9Y6G1 99 aa9.26□□□□□ -0.93
TRAF1-202ENST00000540010 HYKKA2RU49 373 aa9.25□□□□□ -0.93
TRAF1-202ENST00000540010 TNFRSF10CO14798 259 aa9.25□□□□□ -0.93
TRAF1-202ENST00000540010 JUNDP17535 347 aa9.25□□□□□ -0.93
TRAF1-202ENST00000540010 SMAD4Q13485 552 aaKnown RBP9.25□□□□□ -0.93
TRAF1-202ENST00000540010 SMAD2Q15796 467 aaKnown RBP9.25□□□□□ -0.93
TRAF1-202ENST00000540010 METTL11BQ5VVY1 283 aa9.25□□□□□ -0.93
TRAF1-202ENST00000540010 KIAA0895LQ68EN5 471 aa9.25□□□□□ -0.93
TRAF1-202ENST00000540010 C3P1Q6ZMU1 363 aa9.25□□□□□ -0.93
TRAF1-202ENST00000540010 CD300LFQ8TDQ1 290 aa9.25□□□□□ -0.93
TRAF1-202ENST00000540010 GIMAP1Q8WWP7 306 aa9.25□□□□□ -0.93
TRAF1-202ENST00000540010 PATE1Q8WXA2 126 aa9.25□□□□□ -0.93
TRAF1-202ENST00000540010 SLC25A44Q96H78 314 aaPredicted RBP9.25□□□□□ -0.93
TRAF1-202ENST00000540010 GLIPR2Q9H4G4 154 aa9.25□□□□□ -0.93
TRAF1-202ENST00000540010 NOX3Q9HBY0 568 aa9.25□□□□□ -0.93
TRAF1-202ENST00000540010 HRGP04196 525 aa9.25□□□□□ -0.93
TRAF1-202ENST00000540010 H2BFMP0C1H6 154 aa9.25□□□□□ -0.93
TRAF1-202ENST00000540010 KCNJ5P48544 419 aa9.25□□□□□ -0.93
TRAF1-202ENST00000540010 SRP9P49458 86 aaKnown RBP9.25□□□□□ -0.93
TRAF1-202ENST00000540010 MAPK14Q16539 360 aa9.25□□□□□ -0.93
TRAF1-202ENST00000540010 USP51Q70EK9 711 aa9.25□□□□□ -0.93
TRAF1-202ENST00000540010 MEPCEQ7L2J0 689 aaKnown RBP9.25□□□□□ -0.93
TRAF1-202ENST00000540010 ADGRF3Q8IZF5 1079 aa9.25□□□□□ -0.93
TRAF1-202ENST00000540010 CLDN22Q8N7P3 220 aa9.25□□□□□ -0.93
TRAF1-202ENST00000540010 CDRT4Q8N9R6 151 aa9.25□□□□□ -0.93
TRAF1-202ENST00000540010 SYNPRQ8TBG9 265 aa9.25□□□□□ -0.93
TRAF1-202ENST00000540010 CTRCQ99895 268 aa9.25□□□□□ -0.93
TRAF1-202ENST00000540010 ZNF701Q9NV72 531 aaPredicted RBP9.25□□□□□ -0.93
TRAF1-202ENST00000540010 ADAM29Q9UKF5 820 aa9.25□□□□□ -0.93
TRAF1-202ENST00000540010 MRPS17Q9Y2R5 130 aaKnown RBP9.25□□□□□ -0.93
TRAF1-202ENST00000540010 CPED1A4D0V7 1026 aa9.25□□□□□ -0.93
TRAF1-202ENST00000540010 MBTPS2O43462 519 aa9.25□□□□□ -0.93
TRAF1-202ENST00000540010 RNH1P13489 461 aaKnown RBP9.25□□□□□ -0.93
TRAF1-202ENST00000540010 ETV5P41161 510 aa9.25□□□□□ -0.93
TRAF1-202ENST00000540010 HTR3AP46098 478 aa9.25□□□□□ -0.93
TRAF1-202ENST00000540010 ETV1P50549 477 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms