RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 ANKRD28O15084 1053 aa10.1□□□□□ -0.79
CLSTN3-209ENST00000539982 CSTAP01040 98 aa10.1□□□□□ -0.79
CLSTN3-209ENST00000539982 FAM153BP0C7A2 387 aa10.1□□□□□ -0.79
CLSTN3-209ENST00000539982 ASMTP46597 345 aa10.1□□□□□ -0.79
CLSTN3-209ENST00000539982 OR2B6P58173 313 aa10.1□□□□□ -0.79
CLSTN3-209ENST00000539982 TP53BP2Q13625 1128 aa10.1□□□□□ -0.79
CLSTN3-209ENST00000539982 RIN1Q13671 783 aa10.1□□□□□ -0.79
CLSTN3-209ENST00000539982 ZNF141Q15928 474 aa10.1□□□□□ -0.79
CLSTN3-209ENST00000539982 FAM153CQ494X1 144 aa10.1□□□□□ -0.79
CLSTN3-209ENST00000539982 RFTN2Q52LD8 501 aaPredicted RBP10.1□□□□□ -0.79
CLSTN3-209ENST00000539982 HIKESHIQ53FT3 197 aa10.1□□□□□ -0.79
CLSTN3-209ENST00000539982 OR56A1Q8NGH5 318 aa10.1□□□□□ -0.79
CLSTN3-209ENST00000539982 CLHC1Q8NHS4 586 aa10.1□□□□□ -0.79
CLSTN3-209ENST00000539982 PSMA8Q8TAA3 256 aa10.1□□□□□ -0.79
CLSTN3-209ENST00000539982 WDR60Q8WVS4 1066 aa10.1□□□□□ -0.79
CLSTN3-209ENST00000539982 OR5P2Q8WZ92 322 aa10.1□□□□□ -0.79
CLSTN3-209ENST00000539982 DNAJA3Q96EY1 480 aa10.1□□□□□ -0.79
CLSTN3-209ENST00000539982 SLC38A2Q96QD8 506 aa10.1□□□□□ -0.79
CLSTN3-209ENST00000539982 KATNB1Q9BVA0 655 aa10.1□□□□□ -0.79
CLSTN3-209ENST00000539982 SAP130Q9H0E3 1048 aa10.1□□□□□ -0.79
CLSTN3-209ENST00000539982 CTPS2Q9NRF8 586 aa10.1□□□□□ -0.79
CLSTN3-209ENST00000539982 TMEM181Q9P2C4 612 aa10.1□□□□□ -0.79
CLSTN3-209ENST00000539982 ATP6V1HQ9UI12 483 aa10.1□□□□□ -0.79
CLSTN3-209ENST00000539982 KCNE5Q9UJ90 142 aa10.1□□□□□ -0.79
CLSTN3-209ENST00000539982 A0A087WUV0 522 aaPredicted RBP10.09□□□□□ -0.79
CLSTN3-209ENST00000539982 VSTM5A8MXK1 200 aa10.09□□□□□ -0.79
CLSTN3-209ENST00000539982 G3V2L1 256 aa10.09□□□□□ -0.79
CLSTN3-209ENST00000539982 TRIM77I1YAP6 450 aa10.09□□□□□ -0.79
CLSTN3-209ENST00000539982 FCMRO60667 390 aa10.09□□□□□ -0.79
CLSTN3-209ENST00000539982 EIF1BO60739 113 aaKnown RBP10.09□□□□□ -0.79
CLSTN3-209ENST00000539982 UBTFL6P0CB48 400 aaPredicted RBP10.09□□□□□ -0.79
CLSTN3-209ENST00000539982 IFNGR1P15260 489 aa10.09□□□□□ -0.79
CLSTN3-209ENST00000539982 CDH2P19022 906 aaPredicted RBP10.09□□□□□ -0.79
CLSTN3-209ENST00000539982 SLC1A3P43003 542 aa10.09□□□□□ -0.79
CLSTN3-209ENST00000539982 KHKP50053 298 aa10.09□□□□□ -0.79
CLSTN3-209ENST00000539982 SLC17A1Q14916 467 aa10.09□□□□□ -0.79
CLSTN3-209ENST00000539982 TRIP10Q15642 601 aa10.09□□□□□ -0.79
CLSTN3-209ENST00000539982 GPR68Q15743 365 aa10.09□□□□□ -0.79
CLSTN3-209ENST00000539982 SPDYE7PQ495Y7 208 aa10.09□□□□□ -0.79
CLSTN3-209ENST00000539982 PDLIM3Q53GG5 364 aaPredicted RBP10.09□□□□□ -0.79
CLSTN3-209ENST00000539982 PRR31Q5SQ13 230 aa10.09□□□□□ -0.79
CLSTN3-209ENST00000539982 ANKRD16Q6P6B7 361 aa10.09□□□□□ -0.79
CLSTN3-209ENST00000539982 VHLLQ6RSH7 139 aa10.09□□□□□ -0.79
CLSTN3-209ENST00000539982 FRMD7Q6ZUT3 714 aa10.09□□□□□ -0.79
CLSTN3-209ENST00000539982 USP43Q70EL4 1123 aa10.09□□□□□ -0.79
CLSTN3-209ENST00000539982 EIF3MQ7L2H7 374 aaKnown RBP10.09□□□□□ -0.79
CLSTN3-209ENST00000539982 PEG10Q86TG7 708 aaKnown RBP10.09□□□□□ -0.79
CLSTN3-209ENST00000539982 GLCCI1Q86VQ1 547 aa10.09□□□□□ -0.79
CLSTN3-209ENST00000539982 ADGRG3Q86Y34 549 aa10.09□□□□□ -0.79
CLSTN3-209ENST00000539982 ZCCHC24Q8N2G6 241 aaKnown RBP10.09□□□□□ -0.79
CLSTN3-209ENST00000539982 OR2T11Q8NH01 316 aa10.09□□□□□ -0.79
CLSTN3-209ENST00000539982 ZNF563Q8TA94 476 aa10.09□□□□□ -0.79
CLSTN3-209ENST00000539982 UBASH3BQ8TF42 649 aa10.09□□□□□ -0.79
CLSTN3-209ENST00000539982 OR7D2Q96RA2 312 aa10.09□□□□□ -0.79
CLSTN3-209ENST00000539982 DOK1Q99704 481 aa10.09□□□□□ -0.79
CLSTN3-209ENST00000539982 NAA11Q9BSU3 229 aaPredicted RBP10.09□□□□□ -0.79
CLSTN3-209ENST00000539982 RBM4Q9BWF3 364 aaKnown RBP10.09□□□□□ -0.79
CLSTN3-209ENST00000539982 DCDC2Q9UHG0 476 aa10.09□□□□□ -0.79
CLSTN3-209ENST00000539982 PCDHB10Q9UN67 800 aa10.09□□□□□ -0.79
CLSTN3-209ENST00000539982 TMED5Q9Y3A6 229 aa10.09□□□□□ -0.79
CLSTN3-209ENST00000539982 SPEF1Q9Y4P9 236 aa10.09□□□□□ -0.79
CLSTN3-209ENST00000539982 PTGDR2Q9Y5Y4 395 aa10.09□□□□□ -0.79
CLSTN3-209ENST00000539982 EXOC1LA0A1B0GW35 172 aa10.08□□□□□ -0.8
CLSTN3-209ENST00000539982 STX11O75558 287 aa10.08□□□□□ -0.8
CLSTN3-209ENST00000539982 UGT2B17O75795 530 aa10.08□□□□□ -0.8
CLSTN3-209ENST00000539982 MYL2P10916 166 aa10.08□□□□□ -0.8
CLSTN3-209ENST00000539982 LAMP1P11279 417 aa10.08□□□□□ -0.8
CLSTN3-209ENST00000539982 BCKDHAP12694 445 aa10.08□□□□□ -0.8
CLSTN3-209ENST00000539982 CREB1P16220 341 aa10.08□□□□□ -0.8
CLSTN3-209ENST00000539982 GCAP28676 217 aa10.08□□□□□ -0.8
CLSTN3-209ENST00000539982 PGM1P36871 562 aa10.08□□□□□ -0.8
CLSTN3-209ENST00000539982 RPL3P39023 403 aaKnown RBP10.08□□□□□ -0.8
CLSTN3-209ENST00000539982 HILS1P60008 231 aa10.08□□□□□ -0.8
CLSTN3-209ENST00000539982 RPL38P63173 70 aaKnown RBP10.08□□□□□ -0.8
CLSTN3-209ENST00000539982 SLC35A1P78382 337 aa10.08□□□□□ -0.8
CLSTN3-209ENST00000539982 NAAAQ02083 359 aa10.08□□□□□ -0.8
CLSTN3-209ENST00000539982 LSM12Q3MHD2 195 aaKnown RBP10.08□□□□□ -0.8
CLSTN3-209ENST00000539982 C3orf36Q3SXR2 165 aa10.08□□□□□ -0.8
CLSTN3-209ENST00000539982 CFAP157Q5JU67 520 aa10.08□□□□□ -0.8
CLSTN3-209ENST00000539982 CLEC6AQ6EIG7 209 aa10.08□□□□□ -0.8
CLSTN3-209ENST00000539982 ZYG11AQ6WRX3 759 aa10.08□□□□□ -0.8
CLSTN3-209ENST00000539982 HDXQ7Z353 690 aa10.08□□□□□ -0.8
CLSTN3-209ENST00000539982 GRINAQ7Z429 371 aa10.08□□□□□ -0.8
CLSTN3-209ENST00000539982 ABHD12BQ7Z5M8 362 aaPredicted RBP10.08□□□□□ -0.8
CLSTN3-209ENST00000539982 MREGQ8N565 214 aa10.08□□□□□ -0.8
CLSTN3-209ENST00000539982 NATD1Q8N6N6 113 aa10.08□□□□□ -0.8
CLSTN3-209ENST00000539982 POMGNT2Q8NAT1 580 aa10.08□□□□□ -0.8
CLSTN3-209ENST00000539982 OR7A2PQ8NGA2 310 aa10.08□□□□□ -0.8
CLSTN3-209ENST00000539982 OR4F15Q8NGB8 312 aa10.08□□□□□ -0.8
CLSTN3-209ENST00000539982 OR5D16Q8NGK9 328 aa10.08□□□□□ -0.8
CLSTN3-209ENST00000539982 ACMSDQ8TDX5 336 aa10.08□□□□□ -0.8
CLSTN3-209ENST00000539982 TMEM45BQ96B21 275 aa10.08□□□□□ -0.8
CLSTN3-209ENST00000539982 MOAP1Q96BY2 351 aa10.08□□□□□ -0.8
CLSTN3-209ENST00000539982 OR11A1Q9GZK7 315 aa10.08□□□□□ -0.8
CLSTN3-209ENST00000539982 TMEM45AQ9NWC5 275 aa10.08□□□□□ -0.8
CLSTN3-209ENST00000539982 ZNF446Q9NWS9 450 aa10.08□□□□□ -0.8
CLSTN3-209ENST00000539982 CENPVL1A0A0U1RR11 272 aa10.07□□□□□ -0.8
CLSTN3-209ENST00000539982 DUXAA6NLW8 204 aa10.07□□□□□ -0.8
CLSTN3-209ENST00000539982 hCG_2039718K7EN88 272 aa10.07□□□□□ -0.8
CLSTN3-209ENST00000539982 LSM1O15116 133 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms