RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 DPPA4Q7L190 304 aa11.67□□□□□ -0.54
DDX55-206ENST00000539934 ABHD13Q7L211 337 aa11.67□□□□□ -0.54
DDX55-206ENST00000539934 PARS2Q7L3T8 475 aaKnown RBP11.67□□□□□ -0.54
DDX55-206ENST00000539934 DET1Q7L5Y6 550 aa11.67□□□□□ -0.54
DDX55-206ENST00000539934 THAP3Q8WTV1 239 aaPredicted RBP11.67□□□□□ -0.54
DDX55-206ENST00000539934 TWIST2Q8WVJ9 160 aa11.67□□□□□ -0.54
DDX55-206ENST00000539934 SMPDL3AQ92484 453 aa11.67□□□□□ -0.54
DDX55-206ENST00000539934 TM9SF4Q92544 642 aa11.67□□□□□ -0.54
DDX55-206ENST00000539934 ZNF385DQ9H6B1 395 aa11.67□□□□□ -0.54
DDX55-206ENST00000539934 NRIP3Q9NQ35 241 aa11.67□□□□□ -0.54
DDX55-206ENST00000539934 RAD18Q9NS91 495 aa11.67□□□□□ -0.54
DDX55-206ENST00000539934 KLHL28Q9NXS3 571 aa11.67□□□□□ -0.54
DDX55-206ENST00000539934 PCTPQ9UKL6 214 aa11.67□□□□□ -0.54
DDX55-206ENST00000539934 DNAJC15Q9Y5T4 150 aa11.67□□□□□ -0.54
DDX55-206ENST00000539934 APC2O95996 2303 aa11.66□□□□□ -0.54
DDX55-206ENST00000539934 LGALS8O00214 317 aa11.66□□□□□ -0.54
DDX55-206ENST00000539934 UBDO15205 165 aa11.66□□□□□ -0.54
DDX55-206ENST00000539934 CFLARO15519 480 aa11.66□□□□□ -0.54
DDX55-206ENST00000539934 FFAR2O15552 330 aa11.66□□□□□ -0.54
DDX55-206ENST00000539934 SNAPC5O75971 98 aa11.66□□□□□ -0.54
DDX55-206ENST00000539934 NMBP08949 121 aa11.66□□□□□ -0.54
DDX55-206ENST00000539934 ELFN1P0C7U0 828 aa11.66□□□□□ -0.54
DDX55-206ENST00000539934 CRHBPP24387 322 aa11.66□□□□□ -0.54
DDX55-206ENST00000539934 CD200P41217 278 aa11.66□□□□□ -0.54
DDX55-206ENST00000539934 FOXA1P55317 472 aa11.66□□□□□ -0.54
DDX55-206ENST00000539934 ARF6P62330 175 aa11.66□□□□□ -0.54
DDX55-206ENST00000539934 B4GALNT1Q00973 533 aa11.66□□□□□ -0.54
DDX55-206ENST00000539934 ZNF284Q2VY69 593 aa11.66□□□□□ -0.54
DDX55-206ENST00000539934 LRRN1Q6UXK5 716 aa11.66□□□□□ -0.54
DDX55-206ENST00000539934 LINGO2Q7L985 606 aa11.66□□□□□ -0.54
DDX55-206ENST00000539934 CHST15Q7LFX5 561 aaPredicted RBP11.66□□□□□ -0.54
DDX55-206ENST00000539934 MRPL52Q86TS9 123 aaKnown RBP11.66□□□□□ -0.54
DDX55-206ENST00000539934 RANBP3LQ86VV4 465 aaPredicted RBP11.66□□□□□ -0.54
DDX55-206ENST00000539934 DDIASQ8IXT1 998 aa11.66□□□□□ -0.54
DDX55-206ENST00000539934 ZFP82Q8N141 532 aa11.66□□□□□ -0.54
DDX55-206ENST00000539934 EFCAB3Q8N7B9 438 aa11.66□□□□□ -0.54
DDX55-206ENST00000539934 BHLHE23Q8NDY6 225 aa11.66□□□□□ -0.54
DDX55-206ENST00000539934 OR56A4Q8NGH8 313 aa11.66□□□□□ -0.54
DDX55-206ENST00000539934 OR5K1Q8NHB7 308 aa11.66□□□□□ -0.54
DDX55-206ENST00000539934 OR8D1Q8WZ84 308 aa11.66□□□□□ -0.54
DDX55-206ENST00000539934 DPF1Q92782 380 aa11.66□□□□□ -0.54
DDX55-206ENST00000539934 SLC38A4Q969I6 547 aa11.66□□□□□ -0.54
DDX55-206ENST00000539934 SIGLEC11Q96RL6 698 aa11.66□□□□□ -0.54
DDX55-206ENST00000539934 EGFL8Q99944 293 aa11.66□□□□□ -0.54
DDX55-206ENST00000539934 KIR3DX1Q9H7L2 352 aa11.66□□□□□ -0.54
DDX55-206ENST00000539934 CACYBPQ9HB71 228 aaKnown RBP11.66□□□□□ -0.54
DDX55-206ENST00000539934 ZBTB26Q9HCK0 441 aa11.66□□□□□ -0.54
DDX55-206ENST00000539934 FSCN3Q9NQT6 498 aa11.66□□□□□ -0.54
DDX55-206ENST00000539934 KLK13Q9UKR3 277 aa11.66□□□□□ -0.54
DDX55-206ENST00000539934 PI4KAP42356 2102 aa11.66□□□□□ -0.54
DDX55-206ENST00000539934 ASH1LQ9NR48 2969 aaKnown RBP11.66□□□□□ -0.54
DDX55-206ENST00000539934 MUC22E2RYF6 1773 aaPredicted RBP11.66□□□□□ -0.54
DDX55-206ENST00000539934 IGLV3-16A0A075B6K0 115 aa11.66□□□□□ -0.54
DDX55-206ENST00000539934 EDDM13A0A1B0GTR0 161 aa11.66□□□□□ -0.54
DDX55-206ENST00000539934 TBC1D3BA6NDS4 549 aa11.66□□□□□ -0.54
DDX55-206ENST00000539934 ATXN7O15265 892 aaPredicted RBP11.66□□□□□ -0.54
DDX55-206ENST00000539934 ERAL1O75616 437 aaKnown RBP11.66□□□□□ -0.54
DDX55-206ENST00000539934 AKR7A3O95154 331 aa11.66□□□□□ -0.54
DDX55-206ENST00000539934 CYB5R3P00387 301 aaPredicted RBP11.66□□□□□ -0.54
DDX55-206ENST00000539934 AK1P00568 194 aa11.66□□□□□ -0.54
DDX55-206ENST00000539934 CALCRP30988 508 aa11.66□□□□□ -0.54
DDX55-206ENST00000539934 RUNX3Q13761 415 aa11.66□□□□□ -0.54
DDX55-206ENST00000539934 HEPACAMQ14CZ8 416 aa11.66□□□□□ -0.54
DDX55-206ENST00000539934 HNRNPA1L2Q32P51 320 aaKnown RBP11.66□□□□□ -0.54
DDX55-206ENST00000539934 SERPINA13PQ6UXR4 307 aa11.66□□□□□ -0.54
DDX55-206ENST00000539934 ANGPTL5Q86XS5 388 aa11.66□□□□□ -0.54
DDX55-206ENST00000539934 PELI3Q8N2H9 469 aa11.66□□□□□ -0.54
DDX55-206ENST00000539934 DNAAF1Q8NEP3 725 aa11.66□□□□□ -0.54
DDX55-206ENST00000539934 RPLP0P6Q8NHW5 317 aa11.66□□□□□ -0.54
DDX55-206ENST00000539934 RXFP4Q8TDU9 374 aa11.66□□□□□ -0.54
DDX55-206ENST00000539934 PCNPQ8WW12 178 aaKnown RBP11.66□□□□□ -0.54
DDX55-206ENST00000539934 MRGPRX1Q96LB2 322 aa11.66□□□□□ -0.54
DDX55-206ENST00000539934 RNF2Q99496 336 aa11.66□□□□□ -0.54
DDX55-206ENST00000539934 ATG101Q9BSB4 218 aa11.66□□□□□ -0.54
DDX55-206ENST00000539934 EGLN1Q9GZT9 426 aa11.66□□□□□ -0.54
DDX55-206ENST00000539934 OARD1Q9Y530 152 aa11.66□□□□□ -0.54
DDX55-206ENST00000539934 LRRK1Q38SD2 2015 aa11.65□□□□□ -0.54
DDX55-206ENST00000539934 SPAARA0A1B0GVQ0 90 aa11.65□□□□□ -0.54
DDX55-206ENST00000539934 CLDN24A6NM45 220 aa11.65□□□□□ -0.54
DDX55-206ENST00000539934 D6RAR5 112 aa11.65□□□□□ -0.54
DDX55-206ENST00000539934 CDX4O14627 284 aaPredicted RBP11.65□□□□□ -0.54
DDX55-206ENST00000539934 PIP5K1BO14986 540 aa11.65□□□□□ -0.54
DDX55-206ENST00000539934 IFNA17P01571 189 aa11.65□□□□□ -0.54
DDX55-206ENST00000539934 ATP1B2P14415 290 aaPredicted RBP11.65□□□□□ -0.54
DDX55-206ENST00000539934 PNLIPP16233 465 aa11.65□□□□□ -0.54
DDX55-206ENST00000539934 TBXA2RP21731 343 aa11.65□□□□□ -0.54
DDX55-206ENST00000539934 PCMT1P22061 227 aa11.65□□□□□ -0.54
DDX55-206ENST00000539934 MMP12P39900 470 aa11.65□□□□□ -0.54
DDX55-206ENST00000539934 NUDT2P50583 147 aa11.65□□□□□ -0.54
DDX55-206ENST00000539934 TLE4Q04727 773 aa11.65□□□□□ -0.54
DDX55-206ENST00000539934 ZNF234Q14588 700 aa11.65□□□□□ -0.54
DDX55-206ENST00000539934 INPP5JQ15735 1006 aaPredicted RBP11.65□□□□□ -0.54
DDX55-206ENST00000539934 ITPRIPL2Q3MIP1 535 aa11.65□□□□□ -0.54
DDX55-206ENST00000539934 PIP5KL1Q5T9C9 394 aa11.65□□□□□ -0.54
DDX55-206ENST00000539934 BIVMQ86UB2 503 aa11.65□□□□□ -0.54
DDX55-206ENST00000539934 BPIFCQ8NFQ6 507 aa11.65□□□□□ -0.54
DDX55-206ENST00000539934 OR8J3Q8NGG0 315 aa11.65□□□□□ -0.54
DDX55-206ENST00000539934 CREB3L1Q96BA8 519 aa11.65□□□□□ -0.54
DDX55-206ENST00000539934 LGALS12Q96DT0 336 aa11.65□□□□□ -0.54
DDX55-206ENST00000539934 CMTM7Q96FZ5 175 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms