RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 C16orf89Q6UX73 402 aa11.7□□□□□ -0.54
CHFR-216ENST00000538235 LINC00114Q6XXX2 140 aa11.7□□□□□ -0.54
CHFR-216ENST00000538235 ESPNLQ6ZVH7 1005 aa11.7□□□□□ -0.54
CHFR-216ENST00000538235 MRGPRGQ86SM5 289 aa11.7□□□□□ -0.54
CHFR-216ENST00000538235 MEIOBQ8N635 442 aa11.7□□□□□ -0.54
CHFR-216ENST00000538235 OR52E4Q8NGH9 312 aa11.7□□□□□ -0.54
CHFR-216ENST00000538235 ABHD3Q8WU67 409 aa11.7□□□□□ -0.54
CHFR-216ENST00000538235 TMEM234Q8WY98 164 aa11.7□□□□□ -0.54
CHFR-216ENST00000538235 SDCCAG3Q96C92 435 aa11.7□□□□□ -0.54
CHFR-216ENST00000538235 KTI12Q96EK9 354 aaPredicted RBP11.7□□□□□ -0.54
CHFR-216ENST00000538235 TPD52L3Q96J77 140 aa11.7□□□□□ -0.54
CHFR-216ENST00000538235 PSMG3-AS1Q96PY0 264 aa11.7□□□□□ -0.54
CHFR-216ENST00000538235 RNF122Q9H9V4 155 aa11.7□□□□□ -0.54
CHFR-216ENST00000538235 A4GNTQ9UNA3 340 aa11.7□□□□□ -0.54
CHFR-216ENST00000538235 SLC22A20A6NK97 555 aa11.69□□□□□ -0.54
CHFR-216ENST00000538235 FAM90A27PA6NNH2 459 aa11.69□□□□□ -0.54
CHFR-216ENST00000538235 FZD7O75084 574 aa11.69□□□□□ -0.54
CHFR-216ENST00000538235 ZNF682O95780 498 aa11.69□□□□□ -0.54
CHFR-216ENST00000538235 COL8A1P27658 744 aa11.69□□□□□ -0.54
CHFR-216ENST00000538235 NTF4P34130 210 aa11.69□□□□□ -0.54
CHFR-216ENST00000538235 TIMP3P35625 211 aa11.69□□□□□ -0.54
CHFR-216ENST00000538235 YAP1P46937 504 aaKnown RBP11.69□□□□□ -0.54
CHFR-216ENST00000538235 DIO1P49895 249 aa11.69□□□□□ -0.54
CHFR-216ENST00000538235 SELENOWP63302 87 aa11.69□□□□□ -0.54
CHFR-216ENST00000538235 VLDLRP98155 873 aa11.69□□□□□ -0.54
CHFR-216ENST00000538235 PIN1Q13526 163 aaPredicted RBP11.69□□□□□ -0.54
CHFR-216ENST00000538235 ABLIM2Q6H8Q1 611 aa11.69□□□□□ -0.54
CHFR-216ENST00000538235 PGM2L1Q6PCE3 622 aa11.69□□□□□ -0.54
CHFR-216ENST00000538235 DEF8Q6ZN54 512 aa11.69□□□□□ -0.54
CHFR-216ENST00000538235 NKAIN4Q8IVV8 208 aa11.69□□□□□ -0.54
CHFR-216ENST00000538235 WDFY1Q8IWB7 410 aa11.69□□□□□ -0.54
CHFR-216ENST00000538235 ADAMTS16Q8TE57 1224 aa11.69□□□□□ -0.54
CHFR-216ENST00000538235 RNF128Q8TEB7 428 aa11.69□□□□□ -0.54
CHFR-216ENST00000538235 OSTF1Q92882 214 aa11.69□□□□□ -0.54
CHFR-216ENST00000538235 FAM162AQ96A26 154 aa11.69□□□□□ -0.54
CHFR-216ENST00000538235 ZNF300Q96RE9 604 aaPredicted RBP11.69□□□□□ -0.54
CHFR-216ENST00000538235 TACO1Q9BSH4 297 aaKnown RBP11.69□□□□□ -0.54
CHFR-216ENST00000538235 ZNF426Q9BUY5 554 aa11.69□□□□□ -0.54
CHFR-216ENST00000538235 CADM1Q9BY67 442 aaKnown RBP11.69□□□□□ -0.54
CHFR-216ENST00000538235 CALHM2Q9HA72 323 aa11.69□□□□□ -0.54
CHFR-216ENST00000538235 HHATLQ9HCP6 504 aa11.69□□□□□ -0.54
CHFR-216ENST00000538235 NPDC1Q9NQX5 325 aaPredicted RBP11.69□□□□□ -0.54
CHFR-216ENST00000538235 DCAF13Q9NV06 445 aaKnown RBP11.69□□□□□ -0.54
CHFR-216ENST00000538235 AP3M1Q9Y2T2 418 aa11.69□□□□□ -0.54
CHFR-216ENST00000538235 ASH1LQ9NR48 2969 aaKnown RBP11.69□□□□□ -0.54
CHFR-216ENST00000538235 HRNRQ86YZ3 2850 aaPredicted RBP11.68□□□□□ -0.54
CHFR-216ENST00000538235 A0A1W2PNV4 684 aa11.68□□□□□ -0.54
CHFR-216ENST00000538235 ZNF716A6NP11 495 aa11.68□□□□□ -0.54
CHFR-216ENST00000538235 ACOT8O14734 319 aa11.68□□□□□ -0.54
CHFR-216ENST00000538235 ZNF208O43345 1280 aa11.68□□□□□ -0.54
CHFR-216ENST00000538235 PIP5K1CO60331 668 aa11.68□□□□□ -0.54
CHFR-216ENST00000538235 FMO6PO60774 539 aa11.68□□□□□ -0.54
CHFR-216ENST00000538235 PRKD3O94806 890 aa11.68□□□□□ -0.54
CHFR-216ENST00000538235 DIRAS1O95057 198 aa11.68□□□□□ -0.54
CHFR-216ENST00000538235 PTGER4P35408 488 aa11.68□□□□□ -0.54
CHFR-216ENST00000538235 GCKP35557 465 aa11.68□□□□□ -0.54
CHFR-216ENST00000538235 KIR2DL2P43627 348 aaPredicted RBP11.68□□□□□ -0.54
CHFR-216ENST00000538235 UGT2B15P54855 530 aa11.68□□□□□ -0.54
CHFR-216ENST00000538235 CASP6P55212 293 aa11.68□□□□□ -0.54
CHFR-216ENST00000538235 ZSWIM7Q19AV6 140 aa11.68□□□□□ -0.54
CHFR-216ENST00000538235 ALG10BQ5I7T1 473 aa11.68□□□□□ -0.54
CHFR-216ENST00000538235 CYP2R1Q6VVX0 501 aa11.68□□□□□ -0.54
CHFR-216ENST00000538235 TMPPEQ6ZT21 453 aa11.68□□□□□ -0.54
CHFR-216ENST00000538235 GDF7Q7Z4P5 450 aa11.68□□□□□ -0.54
CHFR-216ENST00000538235 CCDC103Q8IW40 242 aa11.68□□□□□ -0.54
CHFR-216ENST00000538235 SLC26A7Q8TE54 656 aa11.68□□□□□ -0.54
CHFR-216ENST00000538235 WNT2BQ93097 391 aa11.68□□□□□ -0.54
CHFR-216ENST00000538235 SLC38A4Q969I6 547 aa11.68□□□□□ -0.54
CHFR-216ENST00000538235 UTP4Q969X6 686 aaKnown RBP11.68□□□□□ -0.54
CHFR-216ENST00000538235 INTS12Q96CB8 462 aaKnown RBP11.68□□□□□ -0.54
CHFR-216ENST00000538235 CCDC124Q96CT7 223 aaKnown RBP11.68□□□□□ -0.54
CHFR-216ENST00000538235 C7orf34Q96L11 122 aa11.68□□□□□ -0.54
CHFR-216ENST00000538235 ZNF559Q9BR84 538 aa11.68□□□□□ -0.54
CHFR-216ENST00000538235 TRIM2Q9C040 744 aa11.68□□□□□ -0.54
CHFR-216ENST00000538235 C1orf21Q9H246 121 aa11.68□□□□□ -0.54
CHFR-216ENST00000538235 RHCGQ9UBD6 479 aa11.68□□□□□ -0.54
CHFR-216ENST00000538235 SLC7A7Q9UM01 511 aa11.68□□□□□ -0.54
CHFR-216ENST00000538235 ZNF175Q9Y473 711 aa11.68□□□□□ -0.54
CHFR-216ENST00000538235 FBN2P35556 2912 aa11.67□□□□□ -0.54
CHFR-216ENST00000538235 ALPK2Q86TB3 2170 aa11.67□□□□□ -0.54
CHFR-216ENST00000538235 A0A087WUJ7 227 aa11.67□□□□□ -0.54
CHFR-216ENST00000538235 LIPT2A6NK58 231 aa11.67□□□□□ -0.54
CHFR-216ENST00000538235 GSTA4O15217 222 aa11.67□□□□□ -0.54
CHFR-216ENST00000538235 RCBTB2O95199 551 aa11.67□□□□□ -0.54
CHFR-216ENST00000538235 CGAP01215 116 aa11.67□□□□□ -0.54
CHFR-216ENST00000538235 TMIGD3P0DMS9 266 aaPredicted RBP11.67□□□□□ -0.54
CHFR-216ENST00000538235 TFPIP10646 304 aa11.67□□□□□ -0.54
CHFR-216ENST00000538235 ME2P23368 584 aa11.67□□□□□ -0.54
CHFR-216ENST00000538235 SIRPAP78324 504 aa11.67□□□□□ -0.54
CHFR-216ENST00000538235 H3F3AP84243 136 aa11.67□□□□□ -0.54
CHFR-216ENST00000538235 C1orf140Q5VVS0 124 aa11.67□□□□□ -0.54
CHFR-216ENST00000538235 CRYBG3Q68DQ2 2970 aa11.67□□□□□ -0.54
CHFR-216ENST00000538235 PPP4R4Q6NUP7 873 aa11.67□□□□□ -0.54
CHFR-216ENST00000538235 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.67□□□□□ -0.54
CHFR-216ENST00000538235 BTLAQ7Z6A9 289 aa11.67□□□□□ -0.54
CHFR-216ENST00000538235 MEX3DQ86XN8 651 aaKnown RBP11.67□□□□□ -0.54
CHFR-216ENST00000538235 ZNF808Q8N4W9 903 aaPredicted RBP11.67□□□□□ -0.54
CHFR-216ENST00000538235 BHLHE22Q8NFJ8 381 aaPredicted RBP11.67□□□□□ -0.54
CHFR-216ENST00000538235 PFN4Q8NHR9 129 aa11.67□□□□□ -0.54
CHFR-216ENST00000538235 SLC25A43Q8WUT9 341 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms