RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 I3L1I5 382 aaPredicted RBP4.58□□□□□ -1.68
CLIP1-207ENST00000536634 LIN7AO14910 233 aaPredicted RBP4.58□□□□□ -1.68
CLIP1-207ENST00000536634 P2RX6O15547 441 aa4.58□□□□□ -1.68
CLIP1-207ENST00000536634 SRPX2O60687 465 aaPredicted RBP4.58□□□□□ -1.68
CLIP1-207ENST00000536634 AP2A2O94973 939 aa4.58□□□□□ -1.68
CLIP1-207ENST00000536634 STATHP02808 62 aa4.58□□□□□ -1.68
CLIP1-207ENST00000536634 SKILP12757 684 aa4.58□□□□□ -1.68
CLIP1-207ENST00000536634 CHRNA7P36544 502 aa4.58□□□□□ -1.68
CLIP1-207ENST00000536634 ZFP36L2P47974 494 aaKnown RBP4.58□□□□□ -1.68
CLIP1-207ENST00000536634 DYNLT1P63172 113 aa4.58□□□□□ -1.68
CLIP1-207ENST00000536634 UBXN1Q04323 297 aa4.58□□□□□ -1.68
CLIP1-207ENST00000536634 PDK1Q15118 436 aa4.58□□□□□ -1.68
CLIP1-207ENST00000536634 PDK2Q15119 407 aa4.58□□□□□ -1.68
CLIP1-207ENST00000536634 TAF1AQ15573 450 aaPredicted RBP4.58□□□□□ -1.68
CLIP1-207ENST00000536634 HADHQ16836 314 aaKnown RBP4.58□□□□□ -1.68
CLIP1-207ENST00000536634 CCSMST1Q4G0I0 132 aa4.58□□□□□ -1.68
CLIP1-207ENST00000536634 COMMD2Q86X83 199 aa4.58□□□□□ -1.68
CLIP1-207ENST00000536634 ZNF567Q8N184 647 aa4.58□□□□□ -1.68
CLIP1-207ENST00000536634 ARHGAP24Q8N264 748 aa4.58□□□□□ -1.68
CLIP1-207ENST00000536634 CSNK1A1LQ8N752 337 aa4.58□□□□□ -1.68
CLIP1-207ENST00000536634 GPATCH11Q8N954 259 aa4.58□□□□□ -1.68
CLIP1-207ENST00000536634 MAPK1IP1LQ8NDC0 245 aa4.58□□□□□ -1.68
CLIP1-207ENST00000536634 OR2L3Q8NG85 312 aa4.58□□□□□ -1.68
CLIP1-207ENST00000536634 OR2L8Q8NGY9 312 aa4.58□□□□□ -1.68
CLIP1-207ENST00000536634 OR4C3Q8NH37 302 aa4.58□□□□□ -1.68
CLIP1-207ENST00000536634 LKAAEAR1Q8TD35 194 aa4.58□□□□□ -1.68
CLIP1-207ENST00000536634 FAM222BQ8WU58 562 aa4.58□□□□□ -1.68
CLIP1-207ENST00000536634 TSLPQ969D9 159 aa4.58□□□□□ -1.68
CLIP1-207ENST00000536634 ULK4Q96C45 1275 aa4.58□□□□□ -1.68
CLIP1-207ENST00000536634 CYTH2Q99418 400 aa4.58□□□□□ -1.68
CLIP1-207ENST00000536634 ATG10Q9H0Y0 220 aa4.58□□□□□ -1.68
CLIP1-207ENST00000536634 DEFB127Q9H1M4 99 aa4.58□□□□□ -1.68
CLIP1-207ENST00000536634 MMP27Q9H306 513 aa4.58□□□□□ -1.68
CLIP1-207ENST00000536634 ZDHHC2Q9UIJ5 367 aa4.58□□□□□ -1.68
CLIP1-207ENST00000536634 ALG6Q9Y672 507 aa4.58□□□□□ -1.68
CLIP1-207ENST00000536634 NBEAL2Q6ZNJ1 2754 aa4.57□□□□□ -1.68
CLIP1-207ENST00000536634 DSCAMO60469 2012 aa4.57□□□□□ -1.68
CLIP1-207ENST00000536634 NCKAP5O14513 1909 aa4.57□□□□□ -1.68
CLIP1-207ENST00000536634 A0A087WW49 117 aa4.57□□□□□ -1.68
CLIP1-207ENST00000536634 A0A0G2JMM0 328 aa4.57□□□□□ -1.68
CLIP1-207ENST00000536634 A0A1W2PPB8 328 aa4.57□□□□□ -1.68
CLIP1-207ENST00000536634 A0A1W2PRS3 328 aa4.57□□□□□ -1.68
CLIP1-207ENST00000536634 LRRD1A4D1F6 860 aa4.57□□□□□ -1.68
CLIP1-207ENST00000536634 OR51F1A6NGY5 319 aa4.57□□□□□ -1.68
CLIP1-207ENST00000536634 C2orf81A6NN90 581 aa4.57□□□□□ -1.68
CLIP1-207ENST00000536634 FAM166BA8MTA8 275 aa4.57□□□□□ -1.68
CLIP1-207ENST00000536634 KIR3DP1A8MWS1 328 aa4.57□□□□□ -1.68
CLIP1-207ENST00000536634 NDC80O14777 642 aa4.57□□□□□ -1.68
CLIP1-207ENST00000536634 PRKRAO75569 313 aaKnown RBP4.57□□□□□ -1.68
CLIP1-207ENST00000536634 CDC123O75794 336 aaPredicted RBP4.57□□□□□ -1.68
CLIP1-207ENST00000536634 ZFAND5O76080 213 aa4.57□□□□□ -1.68
CLIP1-207ENST00000536634 PROSCO94903 275 aa4.57□□□□□ -1.68
CLIP1-207ENST00000536634 ANXA5P08758 320 aa4.57□□□□□ -1.68
CLIP1-207ENST00000536634 CCDC172P0C7W6 258 aa4.57□□□□□ -1.68
CLIP1-207ENST00000536634 BDKRB1P46663 353 aa4.57□□□□□ -1.68
CLIP1-207ENST00000536634 CYB561P49447 251 aa4.57□□□□□ -1.68
CLIP1-207ENST00000536634 BMXP51813 675 aa4.57□□□□□ -1.68
CLIP1-207ENST00000536634 LUMP51884 338 aaPredicted RBP4.57□□□□□ -1.68
CLIP1-207ENST00000536634 MESDQ14696 234 aa4.57□□□□□ -1.68
CLIP1-207ENST00000536634 SLC25A35Q3KQZ1 300 aa4.57□□□□□ -1.68
CLIP1-207ENST00000536634 PHLDA2Q53GA4 152 aa4.57□□□□□ -1.68
CLIP1-207ENST00000536634 MFSD4BQ5TF39 518 aa4.57□□□□□ -1.68
CLIP1-207ENST00000536634 LRRC8BQ6P9F7 803 aa4.57□□□□□ -1.68
CLIP1-207ENST00000536634 Q6ZSR9 355 aa4.57□□□□□ -1.68
CLIP1-207ENST00000536634 TAS2R42Q7RTR8 314 aa4.57□□□□□ -1.68
CLIP1-207ENST00000536634 EGFL6Q8IUX8 553 aa4.57□□□□□ -1.68
CLIP1-207ENST00000536634 TAGAPQ8N103 731 aa4.57□□□□□ -1.68
CLIP1-207ENST00000536634 ZNF611Q8N823 705 aa4.57□□□□□ -1.68
CLIP1-207ENST00000536634 ZFP62Q8NB50 900 aaPredicted RBP4.57□□□□□ -1.68
CLIP1-207ENST00000536634 POGLUT1Q8NBL1 392 aa4.57□□□□□ -1.68
CLIP1-207ENST00000536634 PPFIBP2Q8ND30 876 aa4.57□□□□□ -1.68
CLIP1-207ENST00000536634 OR9A4Q8NGU2 314 aa4.57□□□□□ -1.68
CLIP1-207ENST00000536634 OR2T6Q8NHC8 308 aa4.57□□□□□ -1.68
CLIP1-207ENST00000536634 CFAP61Q8NHU2 1237 aa4.57□□□□□ -1.68
CLIP1-207ENST00000536634 M1APQ8TC57 530 aa4.57□□□□□ -1.68
CLIP1-207ENST00000536634 HEXDCQ8WVB3 486 aa4.57□□□□□ -1.68
CLIP1-207ENST00000536634 METTL21AQ8WXB1 218 aa4.57□□□□□ -1.68
CLIP1-207ENST00000536634 LPGAT1Q92604 370 aa4.57□□□□□ -1.68
CLIP1-207ENST00000536634 OPRPNQ99935 248 aaPredicted RBP4.57□□□□□ -1.68
CLIP1-207ENST00000536634 ACAT2Q9BWD1 397 aa4.57□□□□□ -1.68
CLIP1-207ENST00000536634 DRC3Q9H069 523 aa4.57□□□□□ -1.68
CLIP1-207ENST00000536634 HSD3B7Q9H2F3 369 aa4.57□□□□□ -1.68
CLIP1-207ENST00000536634 TRIM45Q9H8W5 580 aaPredicted RBP4.57□□□□□ -1.68
CLIP1-207ENST00000536634 DEPPQ9NTK1 212 aa4.57□□□□□ -1.68
CLIP1-207ENST00000536634 PLCXD1Q9NUJ7 323 aa4.57□□□□□ -1.68
CLIP1-207ENST00000536634 AIPL1Q9NZN9 384 aa4.57□□□□□ -1.68
CLIP1-207ENST00000536634 KLHL8Q9P2G9 620 aaPredicted RBP4.57□□□□□ -1.68
CLIP1-207ENST00000536634 B3GAT1Q9P2W7 334 aa4.57□□□□□ -1.68
CLIP1-207ENST00000536634 RUVBL2Q9Y230 463 aaKnown RBP4.57□□□□□ -1.68
CLIP1-207ENST00000536634 GRIP1Q9Y3R0 1128 aa4.57□□□□□ -1.68
CLIP1-207ENST00000536634 CR1P17927 2039 aa4.56□□□□□ -1.68
CLIP1-207ENST00000536634 MED12Q93074 2177 aa4.56□□□□□ -1.68
CLIP1-207ENST00000536634 IQCF5A8MTL0 148 aa4.56□□□□□ -1.68
CLIP1-207ENST00000536634 KRTAP16-1A8MUX0 517 aa4.56□□□□□ -1.68
CLIP1-207ENST00000536634 VGLL3A8MV65 326 aa4.56□□□□□ -1.68
CLIP1-207ENST00000536634 H7C0S8 307 aa4.56□□□□□ -1.68
CLIP1-207ENST00000536634 OR1I1O60431 355 aa4.56□□□□□ -1.68
CLIP1-207ENST00000536634 GPIP06744 558 aa4.56□□□□□ -1.68
CLIP1-207ENST00000536634 FREM3P0C091 2139 aa4.56□□□□□ -1.68
CLIP1-207ENST00000536634 OR2T7P0C7T2 308 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms