RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 B4DXG7 233 aa12.26□□□□□ -0.45
VPS33B-202ENST00000535906 DVL2O14641 736 aa12.26□□□□□ -0.45
VPS33B-202ENST00000535906 RGS13O14921 159 aa12.26□□□□□ -0.45
VPS33B-202ENST00000535906 NCR1O76036 304 aa12.26□□□□□ -0.45
VPS33B-202ENST00000535906 CD8BP10966 210 aa12.26□□□□□ -0.45
VPS33B-202ENST00000535906 SLC2A2P11168 524 aaPredicted RBP12.26□□□□□ -0.45
VPS33B-202ENST00000535906 ZNF3P17036 446 aa12.26□□□□□ -0.45
VPS33B-202ENST00000535906 HK1P19367 917 aa12.26□□□□□ -0.45
VPS33B-202ENST00000535906 APEX1P27695 318 aaKnown RBP12.26□□□□□ -0.45
VPS33B-202ENST00000535906 EFNA3P52797 238 aa12.26□□□□□ -0.45
VPS33B-202ENST00000535906 HSD11B2P80365 405 aa12.26□□□□□ -0.45
VPS33B-202ENST00000535906 CD226Q15762 336 aa12.26□□□□□ -0.45
VPS33B-202ENST00000535906 ZSWIM7Q19AV6 140 aa12.26□□□□□ -0.45
VPS33B-202ENST00000535906 TMEM91Q6ZNR0 172 aa12.26□□□□□ -0.45
VPS33B-202ENST00000535906 SLC25A45Q8N413 288 aa12.26□□□□□ -0.45
VPS33B-202ENST00000535906 OR5M3Q8NGP4 307 aa12.26□□□□□ -0.45
VPS33B-202ENST00000535906 HLA-CQ95604 372 aa12.26□□□□□ -0.45
VPS33B-202ENST00000535906 ERMAPQ96PL5 475 aaPredicted RBP12.26□□□□□ -0.45
VPS33B-202ENST00000535906 PELOQ9BRX2 385 aaKnown RBP12.26□□□□□ -0.45
VPS33B-202ENST00000535906 BABAM2Q9NXR7 383 aa12.26□□□□□ -0.45
VPS33B-202ENST00000535906 GMEB2Q9UKD1 530 aa12.26□□□□□ -0.45
VPS33B-202ENST00000535906 ARID1BQ8NFD5 2236 aaPredicted RBP12.26□□□□□ -0.45
VPS33B-202ENST00000535906 TMEM265A0A087WTH1 108 aa12.26□□□□□ -0.45
VPS33B-202ENST00000535906 C2orf92A0A1B0GVN3 265 aa12.26□□□□□ -0.45
VPS33B-202ENST00000535906 RNF13O43567 381 aa12.26□□□□□ -0.45
VPS33B-202ENST00000535906 IDH3BO43837 385 aa12.26□□□□□ -0.45
VPS33B-202ENST00000535906 SLC6A6P31641 620 aa12.26□□□□□ -0.45
VPS33B-202ENST00000535906 EVX1P49640 407 aa12.26□□□□□ -0.45
VPS33B-202ENST00000535906 RIN1Q13671 783 aa12.26□□□□□ -0.45
VPS33B-202ENST00000535906 GALEQ14376 348 aa12.26□□□□□ -0.45
VPS33B-202ENST00000535906 MZT2AQ6P582 158 aa12.26□□□□□ -0.45
VPS33B-202ENST00000535906 SLC35F3Q8IY50 421 aa12.26□□□□□ -0.45
VPS33B-202ENST00000535906 Q8N402 240 aa12.26□□□□□ -0.45
VPS33B-202ENST00000535906 OR7G1Q8NGA0 311 aa12.26□□□□□ -0.45
VPS33B-202ENST00000535906 OR1L3Q8NH93 324 aa12.26□□□□□ -0.45
VPS33B-202ENST00000535906 C3orf49Q96BT1 292 aa12.26□□□□□ -0.45
VPS33B-202ENST00000535906 SHDQ96IW2 340 aa12.26□□□□□ -0.45
VPS33B-202ENST00000535906 SNX18Q96RF0 628 aa12.26□□□□□ -0.45
VPS33B-202ENST00000535906 OR8D2Q9GZM6 311 aa12.26□□□□□ -0.45
VPS33B-202ENST00000535906 NXF5Q9H1B4 397 aaKnown RBP12.26□□□□□ -0.45
VPS33B-202ENST00000535906 ADGRL4Q9HBW9 690 aa12.26□□□□□ -0.45
VPS33B-202ENST00000535906 MKKSQ9NPJ1 570 aaPredicted RBP12.26□□□□□ -0.45
VPS33B-202ENST00000535906 CHRNA9Q9UGM1 479 aa12.26□□□□□ -0.45
VPS33B-202ENST00000535906 BAIAP2Q9UQB8 552 aa12.26□□□□□ -0.45
VPS33B-202ENST00000535906 PCDHGB7Q9Y5F8 929 aa12.26□□□□□ -0.45
VPS33B-202ENST00000535906 RP1P56715 2156 aa12.25□□□□□ -0.45
VPS33B-202ENST00000535906 MCIDASD6RGH6 385 aa12.25□□□□□ -0.45
VPS33B-202ENST00000535906 GTPBP1O00178 669 aaKnown RBP12.25□□□□□ -0.45
VPS33B-202ENST00000535906 BCAT2O15382 392 aaPredicted RBP12.25□□□□□ -0.45
VPS33B-202ENST00000535906 NUDT21O43809 227 aaKnown RBP12.25□□□□□ -0.45
VPS33B-202ENST00000535906 RGS9O75916 674 aaPredicted RBP12.25□□□□□ -0.45
VPS33B-202ENST00000535906 SBK2P0C263 348 aa12.25□□□□□ -0.45
VPS33B-202ENST00000535906 FOLR1P15328 257 aa12.25□□□□□ -0.45
VPS33B-202ENST00000535906 HIST1H1CP16403 213 aaKnown RBP12.25□□□□□ -0.45
VPS33B-202ENST00000535906 CSF2RBP32927 897 aa12.25□□□□□ -0.45
VPS33B-202ENST00000535906 RCVRNP35243 200 aa12.25□□□□□ -0.45
VPS33B-202ENST00000535906 KIR2DL3P43628 341 aa12.25□□□□□ -0.45
VPS33B-202ENST00000535906 GPR143P51810 404 aa12.25□□□□□ -0.45
VPS33B-202ENST00000535906 MADCAM1Q13477 382 aa12.25□□□□□ -0.45
VPS33B-202ENST00000535906 NDUFA5Q16718 116 aa12.25□□□□□ -0.45
VPS33B-202ENST00000535906 TBRG1Q3YBR2 411 aa12.25□□□□□ -0.45
VPS33B-202ENST00000535906 ZFP69Q49AA0 526 aa12.25□□□□□ -0.45
VPS33B-202ENST00000535906 TRIQKQ629K1 86 aa12.25□□□□□ -0.45
VPS33B-202ENST00000535906 APOOLQ6UXV4 268 aa12.25□□□□□ -0.45
VPS33B-202ENST00000535906 TMEM151BQ8IW70 566 aa12.25□□□□□ -0.45
VPS33B-202ENST00000535906 C19orf18Q8NEA5 215 aa12.25□□□□□ -0.45
VPS33B-202ENST00000535906 NLGN4YQ8NFZ3 816 aaPredicted RBP12.25□□□□□ -0.45
VPS33B-202ENST00000535906 OR52E2Q8NGJ4 325 aa12.25□□□□□ -0.45
VPS33B-202ENST00000535906 ENKURQ8TC29 256 aa12.25□□□□□ -0.45
VPS33B-202ENST00000535906 DNASE2BQ8WZ79 361 aa12.25□□□□□ -0.45
VPS33B-202ENST00000535906 TP53INP1Q96A56 240 aa12.25□□□□□ -0.45
VPS33B-202ENST00000535906 FRMD6Q96NE9 622 aa12.25□□□□□ -0.45
VPS33B-202ENST00000535906 RNF32Q9H0A6 362 aa12.25□□□□□ -0.45
VPS33B-202ENST00000535906 KCNN2Q9H2S1 579 aa12.25□□□□□ -0.45
VPS33B-202ENST00000535906 RNF121Q9H920 327 aa12.25□□□□□ -0.45
VPS33B-202ENST00000535906 DDX28Q9NUL7 540 aaKnown RBP12.25□□□□□ -0.45
VPS33B-202ENST00000535906 SERTAD3Q9UJW9 196 aa12.25□□□□□ -0.45
VPS33B-202ENST00000535906 ICAM5Q9UMF0 924 aa12.25□□□□□ -0.45
VPS33B-202ENST00000535906 MPDZO75970 2070 aa12.25□□□□□ -0.45
VPS33B-202ENST00000535906 IGKV3D-11A0A0A0MRZ8 115 aa12.25□□□□□ -0.45
VPS33B-202ENST00000535906 TTC36A6NLP5 189 aa12.25□□□□□ -0.45
VPS33B-202ENST00000535906 OIP5O43482 229 aa12.25□□□□□ -0.45
VPS33B-202ENST00000535906 GIMD1P0DJR0 217 aa12.25□□□□□ -0.45
VPS33B-202ENST00000535906 MYL9P24844 172 aa12.25□□□□□ -0.45
VPS33B-202ENST00000535906 ARL4DP49703 201 aa12.25□□□□□ -0.45
VPS33B-202ENST00000535906 AFF3P51826 1226 aaKnown RBP12.25□□□□□ -0.45
VPS33B-202ENST00000535906 BIKQ13323 160 aa12.25□□□□□ -0.45
VPS33B-202ENST00000535906 P2RY14Q15391 338 aa12.25□□□□□ -0.45
VPS33B-202ENST00000535906 GXYLT1Q4G148 440 aa12.25□□□□□ -0.45
VPS33B-202ENST00000535906 FNDC7Q5VTL7 733 aa12.25□□□□□ -0.45
VPS33B-202ENST00000535906 ARHGAP11AQ6P4F7 1023 aa12.25□□□□□ -0.45
VPS33B-202ENST00000535906 CBLN3Q6UW01 205 aa12.25□□□□□ -0.45
VPS33B-202ENST00000535906 FAM71CQ8NEG0 241 aa12.25□□□□□ -0.45
VPS33B-202ENST00000535906 SDR9C7Q8NEX9 313 aa12.25□□□□□ -0.45
VPS33B-202ENST00000535906 OR4K13Q8NH42 304 aa12.25□□□□□ -0.45
VPS33B-202ENST00000535906 SGTBQ96EQ0 304 aa12.25□□□□□ -0.45
VPS33B-202ENST00000535906 ADAM30Q9UKF2 790 aa12.25□□□□□ -0.45
VPS33B-202ENST00000535906 ADAM18Q9Y3Q7 739 aa12.25□□□□□ -0.45
VPS33B-202ENST00000535906 IER3IP1Q9Y5U9 82 aa12.25□□□□□ -0.45
VPS33B-202ENST00000535906 CLCA3PQ9Y6N3 262 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms