RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 ABHD3Q8WU67 409 aa8.76□□□□□ -1.01
NUP98-220ENST00000533346 ROBO4Q8WZ75 1007 aa8.76□□□□□ -1.01
NUP98-220ENST00000533346 NINJ1Q92982 152 aa8.76□□□□□ -1.01
NUP98-220ENST00000533346 LRRC58Q96CX6 371 aa8.76□□□□□ -1.01
NUP98-220ENST00000533346 ARL5BQ96KC2 179 aa8.76□□□□□ -1.01
NUP98-220ENST00000533346 OR5B2Q96R09 309 aa8.76□□□□□ -1.01
NUP98-220ENST00000533346 ZNF607Q96SK3 696 aa8.76□□□□□ -1.01
NUP98-220ENST00000533346 HDHD5Q9BXW7 423 aa8.76□□□□□ -1.01
NUP98-220ENST00000533346 OPN3Q9H1Y3 402 aaPredicted RBP8.76□□□□□ -1.01
NUP98-220ENST00000533346 NANOGQ9H9S0 305 aa8.76□□□□□ -1.01
NUP98-220ENST00000533346 CACYBPQ9HB71 228 aaKnown RBP8.76□□□□□ -1.01
NUP98-220ENST00000533346 GPR52Q9Y2T5 361 aa8.76□□□□□ -1.01
NUP98-220ENST00000533346 TMED7Q9Y3B3 224 aa8.76□□□□□ -1.01
NUP98-220ENST00000533346 TMEM72A0PK05 275 aa8.75□□□□□ -1.01
NUP98-220ENST00000533346 SH3D21A4FU49 640 aa8.75□□□□□ -1.01
NUP98-220ENST00000533346 A8MVM7 634 aa8.75□□□□□ -1.01
NUP98-220ENST00000533346 TMEM229AB2RXF0 380 aa8.75□□□□□ -1.01
NUP98-220ENST00000533346 FXYD1O00168 92 aa8.75□□□□□ -1.01
NUP98-220ENST00000533346 GPR171O14626 319 aa8.75□□□□□ -1.01
NUP98-220ENST00000533346 FMO6PO60774 539 aa8.75□□□□□ -1.01
NUP98-220ENST00000533346 CCDC22O60826 627 aa8.75□□□□□ -1.01
NUP98-220ENST00000533346 GCM2O75603 506 aaPredicted RBP8.75□□□□□ -1.01
NUP98-220ENST00000533346 IMPDH2P12268 514 aa8.75□□□□□ -1.01
NUP98-220ENST00000533346 CRYGSP22914 178 aa8.75□□□□□ -1.01
NUP98-220ENST00000533346 OR3A2P47893 321 aa8.75□□□□□ -1.01
NUP98-220ENST00000533346 SLC35A1P78382 337 aa8.75□□□□□ -1.01
NUP98-220ENST00000533346 RASGEF1BQ0VAM2 473 aa8.75□□□□□ -1.01
NUP98-220ENST00000533346 NFYCQ13952 458 aa8.75□□□□□ -1.01
NUP98-220ENST00000533346 VEZF1Q14119 521 aa8.75□□□□□ -1.01
NUP98-220ENST00000533346 P2RY6Q15077 328 aa8.75□□□□□ -1.01
NUP98-220ENST00000533346 FAM91A1Q658Y4 838 aa8.75□□□□□ -1.01
NUP98-220ENST00000533346 PAQR6Q6TCH4 344 aa8.75□□□□□ -1.01
NUP98-220ENST00000533346 TFAP2EQ6VUC0 442 aa8.75□□□□□ -1.01
NUP98-220ENST00000533346 STAC2Q6ZMT1 411 aa8.75□□□□□ -1.01
NUP98-220ENST00000533346 SSX8Q7RTT4 187 aa8.75□□□□□ -1.01
NUP98-220ENST00000533346 HMGN2P46Q86SG4 172 aa8.75□□□□□ -1.01
NUP98-220ENST00000533346 ATG4DQ86TL0 474 aaPredicted RBP8.75□□□□□ -1.01
NUP98-220ENST00000533346 STK32CQ86UX6 486 aa8.75□□□□□ -1.01
NUP98-220ENST00000533346 TUSC5Q8IXB3 177 aa8.75□□□□□ -1.01
NUP98-220ENST00000533346 ZZZ3Q8IYH5 903 aa8.75□□□□□ -1.01
NUP98-220ENST00000533346 OR6S1Q8NH40 331 aa8.75□□□□□ -1.01
NUP98-220ENST00000533346 NFKBIDQ8NI38 313 aa8.75□□□□□ -1.01
NUP98-220ENST00000533346 LINC01560Q8TB33 94 aa8.75□□□□□ -1.01
NUP98-220ENST00000533346 PIGXQ8TBF5 258 aa8.75□□□□□ -1.01
NUP98-220ENST00000533346 C3orf49Q96BT1 292 aa8.75□□□□□ -1.01
NUP98-220ENST00000533346 ZHX1-C8orf76Q96EF9 292 aa8.75□□□□□ -1.01
NUP98-220ENST00000533346 BOD1Q96IK1 185 aa8.75□□□□□ -1.01
NUP98-220ENST00000533346 SF3B5Q9BWJ5 86 aaKnown RBP8.75□□□□□ -1.01
NUP98-220ENST00000533346 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.75□□□□□ -1.01
NUP98-220ENST00000533346 ANGPT4Q9Y264 503 aa8.75□□□□□ -1.01
NUP98-220ENST00000533346 AP3M1Q9Y2T2 418 aa8.75□□□□□ -1.01
NUP98-220ENST00000533346 RAI1Q7Z5J4 1906 aaPredicted RBP8.75□□□□□ -1.01
NUP98-220ENST00000533346 ANKHD1Q8IWZ3 2542 aaKnown RBP8.75□□□□□ -1.01
NUP98-220ENST00000533346 C2CD3Q4AC94 2353 aa8.75□□□□□ -1.01
NUP98-220ENST00000533346 SMNDC1O75940 238 aaKnown RBP eCLIP8.74□□□□□ -1.01
NUP98-220ENST00000533346 VAMP5O95183 116 aa8.74□□□□□ -1.01
NUP98-220ENST00000533346 LGI1O95970 557 aa8.74□□□□□ -1.01
NUP98-220ENST00000533346 HRGP04196 525 aa8.74□□□□□ -1.01
NUP98-220ENST00000533346 GKN3PP0CG01 181 aa8.74□□□□□ -1.01
NUP98-220ENST00000533346 PRG2P13727 222 aa8.74□□□□□ -1.01
NUP98-220ENST00000533346 CXCR1P25024 350 aa8.74□□□□□ -1.01
NUP98-220ENST00000533346 CCKARP32238 428 aa8.74□□□□□ -1.01
NUP98-220ENST00000533346 PCGF2P35227 344 aa8.74□□□□□ -1.01
NUP98-220ENST00000533346 KCNJ5P48544 419 aa8.74□□□□□ -1.01
NUP98-220ENST00000533346 SIRPAP78324 504 aa8.74□□□□□ -1.01
NUP98-220ENST00000533346 SELPLGQ14242 412 aa8.74□□□□□ -1.01
NUP98-220ENST00000533346 VMACQ2NL98 169 aa8.74□□□□□ -1.01
NUP98-220ENST00000533346 SWT1Q5T5J6 900 aaKnown RBP8.74□□□□□ -1.01
NUP98-220ENST00000533346 INTS11Q5TA45 600 aaKnown RBP8.74□□□□□ -1.01
NUP98-220ENST00000533346 C8orf82Q6P1X6 216 aaPredicted RBP8.74□□□□□ -1.01
NUP98-220ENST00000533346 LINC00114Q6XXX2 140 aa8.74□□□□□ -1.01
NUP98-220ENST00000533346 NUFIP2Q7Z417 695 aaKnown RBP8.74□□□□□ -1.01
NUP98-220ENST00000533346 PATL1Q86TB9 770 aaKnown RBP8.74□□□□□ -1.01
NUP98-220ENST00000533346 PCYOX1LQ8NBM8 494 aa8.74□□□□□ -1.01
NUP98-220ENST00000533346 ATP6V1C2Q8NEY4 427 aa8.74□□□□□ -1.01
NUP98-220ENST00000533346 MFSD8Q8NHS3 518 aa8.74□□□□□ -1.01
NUP98-220ENST00000533346 DNAJA4Q8WW22 397 aaPredicted RBP8.74□□□□□ -1.01
NUP98-220ENST00000533346 RASSF5Q8WWW0 418 aa8.74□□□□□ -1.01
NUP98-220ENST00000533346 SLC38A4Q969I6 547 aa8.74□□□□□ -1.01
NUP98-220ENST00000533346 WFIKKN1Q96NZ8 548 aa8.74□□□□□ -1.01
NUP98-220ENST00000533346 NAA11Q9BSU3 229 aaPredicted RBP8.74□□□□□ -1.01
NUP98-220ENST00000533346 TRIM2Q9C040 744 aa8.74□□□□□ -1.01
NUP98-220ENST00000533346 PCDHAC1Q9H158 963 aa8.74□□□□□ -1.01
NUP98-220ENST00000533346 GID8Q9NWU2 228 aa8.74□□□□□ -1.01
NUP98-220ENST00000533346 KLHL28Q9NXS3 571 aa8.74□□□□□ -1.01
NUP98-220ENST00000533346 ZNF226Q9NYT6 803 aa8.74□□□□□ -1.01
NUP98-220ENST00000533346 EMC3Q9P0I2 261 aa8.74□□□□□ -1.01
NUP98-220ENST00000533346 TESQ9UGI8 421 aaKnown RBP8.74□□□□□ -1.01
NUP98-220ENST00000533346 ZFHX3Q15911 3703 aa8.74□□□□□ -1.01
NUP98-220ENST00000533346 LOC102725191A0A1B0GVB3 256 aa8.73□□□□□ -1.01
NUP98-220ENST00000533346 ZC3H12DA2A288 527 aaKnown RBP8.73□□□□□ -1.01
NUP98-220ENST00000533346 LIPT2A6NK58 231 aa8.73□□□□□ -1.01
NUP98-220ENST00000533346 ZNF814B7Z6K7 855 aa8.73□□□□□ -1.01
NUP98-220ENST00000533346 FTCDNL1E5RQL4 147 aa8.73□□□□□ -1.01
NUP98-220ENST00000533346 M0QX08 132 aa8.73□□□□□ -1.01
NUP98-220ENST00000533346 TPST1O60507 370 aa8.73□□□□□ -1.01
NUP98-220ENST00000533346 TPST2O60704 377 aa8.73□□□□□ -1.01
NUP98-220ENST00000533346 GPIP06744 558 aa8.73□□□□□ -1.01
NUP98-220ENST00000533346 FESP07332 822 aa8.73□□□□□ -1.01
NUP98-220ENST00000533346 TFPIP10646 304 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms