RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 A0A1B0GX12 115 aa10.72□□□□□ -0.69
SSBP3-214ENST00000533209 A0A1W2PNV4 684 aa10.72□□□□□ -0.69
SSBP3-214ENST00000533209 NKX2-6A6NCS4 301 aa10.72□□□□□ -0.69
SSBP3-214ENST00000533209 FAM90A27PA6NNH2 459 aa10.72□□□□□ -0.69
SSBP3-214ENST00000533209 DVL2O14641 736 aa10.72□□□□□ -0.69
SSBP3-214ENST00000533209 NPIPB7O75200 414 aa10.72□□□□□ -0.69
SSBP3-214ENST00000533209 TNFSF13O75888 250 aa10.72□□□□□ -0.69
SSBP3-214ENST00000533209 UBOX5O94941 541 aa10.72□□□□□ -0.69
SSBP3-214ENST00000533209 PMS2P2O95744 297 aa10.72□□□□□ -0.69
SSBP3-214ENST00000533209 IL18BPO95998 194 aa10.72□□□□□ -0.69
SSBP3-214ENST00000533209 IMPDH2P12268 514 aa10.72□□□□□ -0.69
SSBP3-214ENST00000533209 KLK2P20151 261 aa10.72□□□□□ -0.69
SSBP3-214ENST00000533209 TNFRSF1BP20333 461 aa10.72□□□□□ -0.69
SSBP3-214ENST00000533209 BMP5P22003 454 aa10.72□□□□□ -0.69
SSBP3-214ENST00000533209 AGFG1P52594 562 aaKnown RBP10.72□□□□□ -0.69
SSBP3-214ENST00000533209 NCALDP61601 193 aa10.72□□□□□ -0.69
SSBP3-214ENST00000533209 CEACAM7Q14002 265 aa10.72□□□□□ -0.69
SSBP3-214ENST00000533209 FXNQ16595 210 aa10.72□□□□□ -0.69
SSBP3-214ENST00000533209 SLC25A35Q3KQZ1 300 aa10.72□□□□□ -0.69
SSBP3-214ENST00000533209 SAMD4BQ5PRF9 694 aaKnown RBP10.72□□□□□ -0.69
SSBP3-214ENST00000533209 OR2A2Q6IF42 318 aa10.72□□□□□ -0.69
SSBP3-214ENST00000533209 PPP4R4Q6NUP7 873 aa10.72□□□□□ -0.69
SSBP3-214ENST00000533209 MAMDC2Q7Z304 686 aaPredicted RBP10.72□□□□□ -0.69
SSBP3-214ENST00000533209 RANBP3LQ86VV4 465 aaPredicted RBP10.72□□□□□ -0.69
SSBP3-214ENST00000533209 TSPYL5Q86VY4 417 aaPredicted RBP10.72□□□□□ -0.69
SSBP3-214ENST00000533209 CARM1Q86X55 608 aa10.72□□□□□ -0.69
SSBP3-214ENST00000533209 RELL2Q8NC24 303 aaPredicted RBP10.72□□□□□ -0.69
SSBP3-214ENST00000533209 DNAJA4Q8WW22 397 aaPredicted RBP10.72□□□□□ -0.69
SSBP3-214ENST00000533209 SLC38A4Q969I6 547 aa10.72□□□□□ -0.69
SSBP3-214ENST00000533209 DDIT4LQ96D03 193 aa10.72□□□□□ -0.69
SSBP3-214ENST00000533209 DNAJA3Q96EY1 480 aa10.72□□□□□ -0.69
SSBP3-214ENST00000533209 SFXN3Q9BWM7 321 aa10.72□□□□□ -0.69
SSBP3-214ENST00000533209 POTEKPQ9BYX7 375 aa10.72□□□□□ -0.69
SSBP3-214ENST00000533209 PRRG4Q9BZD6 226 aa10.72□□□□□ -0.69
SSBP3-214ENST00000533209 PCDHAC1Q9H158 963 aa10.72□□□□□ -0.69
SSBP3-214ENST00000533209 C12orf10Q9HB07 376 aa10.72□□□□□ -0.69
SSBP3-214ENST00000533209 TMEM27Q9HBJ8 222 aa10.72□□□□□ -0.69
SSBP3-214ENST00000533209 PLEKHB1Q9UF11 243 aaPredicted RBP10.72□□□□□ -0.69
SSBP3-214ENST00000533209 EGFL7Q9UHF1 273 aa10.72□□□□□ -0.69
SSBP3-214ENST00000533209 TRAPPC4Q9Y296 219 aa10.72□□□□□ -0.69
SSBP3-214ENST00000533209 SLC9A8Q9Y2E8 581 aa10.72□□□□□ -0.69
SSBP3-214ENST00000533209 KLF2Q9Y5W3 355 aaPredicted RBP10.72□□□□□ -0.69
SSBP3-214ENST00000533209 ADGRG4Q8IZF6 3080 aa10.71□□□□□ -0.69
SSBP3-214ENST00000533209 IGKV1D-42A0A075B6H8 117 aa10.71□□□□□ -0.69
SSBP3-214ENST00000533209 IGHV3-15A0A0B4J1V0 119 aa10.71□□□□□ -0.69
SSBP3-214ENST00000533209 A8MVM7 634 aa10.71□□□□□ -0.69
SSBP3-214ENST00000533209 SULT2B1O00204 365 aa10.71□□□□□ -0.69
SSBP3-214ENST00000533209 SMAD9O15198 467 aaKnown RBP10.71□□□□□ -0.69
SSBP3-214ENST00000533209 LYPD3O95274 346 aa10.71□□□□□ -0.69
SSBP3-214ENST00000533209 CRHP06850 196 aa10.71□□□□□ -0.69
SSBP3-214ENST00000533209 TCN1P20061 433 aaPredicted RBP10.71□□□□□ -0.69
SSBP3-214ENST00000533209 ENPP1P22413 925 aa10.71□□□□□ -0.69
SSBP3-214ENST00000533209 GRNP28799 593 aaKnown RBP10.71□□□□□ -0.69
SSBP3-214ENST00000533209 OPRM1P35372 400 aa10.71□□□□□ -0.69
SSBP3-214ENST00000533209 KIR2DL2P43627 348 aaPredicted RBP10.71□□□□□ -0.69
SSBP3-214ENST00000533209 SELENOWP63302 87 aa10.71□□□□□ -0.69
SSBP3-214ENST00000533209 CSNK2A1P68400 391 aaPredicted RBP10.71□□□□□ -0.69
SSBP3-214ENST00000533209 EGR4Q05215 589 aa10.71□□□□□ -0.69
SSBP3-214ENST00000533209 TFF3Q07654 80 aa10.71□□□□□ -0.69
SSBP3-214ENST00000533209 ALG10BQ5I7T1 473 aa10.71□□□□□ -0.69
SSBP3-214ENST00000533209 ENTPD8Q5MY95 495 aa10.71□□□□□ -0.69
SSBP3-214ENST00000533209 ARHGAP21Q5T5U3 1957 aa10.71□□□□□ -0.69
SSBP3-214ENST00000533209 GLYATQ6IB77 296 aa10.71□□□□□ -0.69
SSBP3-214ENST00000533209 ULK3Q6PHR2 472 aa10.71□□□□□ -0.69
SSBP3-214ENST00000533209 CBLL1Q75N03 491 aa10.71□□□□□ -0.69
SSBP3-214ENST00000533209 FCRLAQ7L513 359 aa10.71□□□□□ -0.69
SSBP3-214ENST00000533209 STK35Q8TDR2 534 aa10.71□□□□□ -0.69
SSBP3-214ENST00000533209 RNF128Q8TEB7 428 aa10.71□□□□□ -0.69
SSBP3-214ENST00000533209 SLC47A1Q96FL8 570 aa10.71□□□□□ -0.69
SSBP3-214ENST00000533209 TPD52L3Q96J77 140 aa10.71□□□□□ -0.69
SSBP3-214ENST00000533209 KCNJ16Q9NPI9 418 aa10.71□□□□□ -0.69
SSBP3-214ENST00000533209 ADPRHL2Q9NX46 363 aa10.71□□□□□ -0.69
SSBP3-214ENST00000533209 SH3GLB1Q9Y371 365 aa10.71□□□□□ -0.69
SSBP3-214ENST00000533209 DOCK7Q96N67 2140 aa10.7□□□□□ -0.7
SSBP3-214ENST00000533209 A0A087WUJ7 227 aa10.7□□□□□ -0.7
SSBP3-214ENST00000533209 LIPT2A6NK58 231 aa10.7□□□□□ -0.7
SSBP3-214ENST00000533209 ELOA3DA6NLF2 546 aaPredicted RBP10.7□□□□□ -0.7
SSBP3-214ENST00000533209 CPSF4LA6NMK7 179 aaKnown RBP10.7□□□□□ -0.7
SSBP3-214ENST00000533209 PRSS44E7EML9 344 aa10.7□□□□□ -0.7
SSBP3-214ENST00000533209 C19orf84I3L1E1 186 aa10.7□□□□□ -0.7
SSBP3-214ENST00000533209 DNPH1O43598 174 aa10.7□□□□□ -0.7
SSBP3-214ENST00000533209 SS18L1O75177 396 aaPredicted RBP10.7□□□□□ -0.7
SSBP3-214ENST00000533209 ZNF682O95780 498 aa10.7□□□□□ -0.7
SSBP3-214ENST00000533209 SERPINA1P01009 418 aa10.7□□□□□ -0.7
SSBP3-214ENST00000533209 THY1P04216 161 aa10.7□□□□□ -0.7
SSBP3-214ENST00000533209 PNMTP11086 282 aa10.7□□□□□ -0.7
SSBP3-214ENST00000533209 IDUAP35475 653 aa10.7□□□□□ -0.7
SSBP3-214ENST00000533209 MSX2P35548 267 aaPredicted RBP10.7□□□□□ -0.7
SSBP3-214ENST00000533209 OR1E2P47887 323 aa10.7□□□□□ -0.7
SSBP3-214ENST00000533209 CDH12P55289 794 aa10.7□□□□□ -0.7
SSBP3-214ENST00000533209 OR2B6P58173 313 aa10.7□□□□□ -0.7
SSBP3-214ENST00000533209 ELOA3BQ3SY89 546 aa10.7□□□□□ -0.7
SSBP3-214ENST00000533209 SPATS1Q496A3 300 aa10.7□□□□□ -0.7
SSBP3-214ENST00000533209 SWT1Q5T5J6 900 aaKnown RBP10.7□□□□□ -0.7
SSBP3-214ENST00000533209 C1orf140Q5VVS0 124 aa10.7□□□□□ -0.7
SSBP3-214ENST00000533209 VWA1Q6PCB0 445 aa10.7□□□□□ -0.7
SSBP3-214ENST00000533209 ZNF613Q6PF04 617 aa10.7□□□□□ -0.7
SSBP3-214ENST00000533209 LINC00114Q6XXX2 140 aa10.7□□□□□ -0.7
SSBP3-214ENST00000533209 VTCN1Q7Z7D3 282 aa10.7□□□□□ -0.7
SSBP3-214ENST00000533209 ELOA3Q8NG57 546 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms