RNA–Protein interactions for RNA: ENST00000531110.5

CD44-231, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-231ENST00000531110 CLIC4Q9Y696 253 aa5.14□□□□□ -1.59
CD44-231ENST00000531110 COL22A1Q8NFW1 1626 aaPredicted RBP5.14□□□□□ -1.59
CD44-231ENST00000531110 A0A087WWV3 80 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 A0A0G2JND7 137 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 GLYATL1P3A0A0U1RQE8 302 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 A0A1W2PPH5 198 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 CLEC18AA5D8T8 446 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 FAM90A10PA6NDY2 464 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 GABRR3A8MPY1 467 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 CDRT15L2A8MXV6 281 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 ZNF99A8MXY4 864 aaPredicted RBP5.13□□□□□ -1.59
CD44-231ENST00000531110 WWP2O00308 870 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 ACOT8O14734 319 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 MYL12BO14950 172 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 OGG1O15527 345 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 ORC5O43913 435 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 VPS26AO75436 327 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 PRAMEF12O95522 483 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 IGKV2-30P06310 120 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 SPP1P10451 314 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 MYL12AP19105 171 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 CNR1P21554 472 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 FMO4P31512 558 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 MC5RP33032 325 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 GGT2P36268 569 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 MNDAP41218 407 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 QARSP47897 775 aaKnown RBP5.13□□□□□ -1.59
CD44-231ENST00000531110 CYP2J2P51589 502 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 CDH11P55287 796 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 ARF3P61204 181 aaPredicted RBP5.13□□□□□ -1.59
CD44-231ENST00000531110 ADARB1P78563 741 aaKnown RBP5.13□□□□□ -1.59
CD44-231ENST00000531110 ARF1P84077 181 aaKnown RBP5.13□□□□□ -1.59
CD44-231ENST00000531110 SREBF2Q12772 1141 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 SLAQ13239 276 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 CDH18Q13634 790 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 MED22Q15528 200 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 TBCEQ15813 527 aaPredicted RBP5.13□□□□□ -1.59
CD44-231ENST00000531110 RFTN2Q52LD8 501 aaPredicted RBP5.13□□□□□ -1.59
CD44-231ENST00000531110 SOWAHCQ53LP3 525 aaPredicted RBP5.13□□□□□ -1.59
CD44-231ENST00000531110 ARL13AQ5H913 290 aaPredicted RBP5.13□□□□□ -1.59
CD44-231ENST00000531110 ZNF667Q5HYK9 610 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 SIRPB2Q5JXA9 342 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 GLRA4Q5JXX5 417 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 LRRC38Q5VT99 294 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 FAM71E1Q6IPT2 247 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 ANKRD54Q6NXT1 300 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 HAGHLQ6PII5 290 aaPredicted RBP5.13□□□□□ -1.59
CD44-231ENST00000531110 TIPARPQ7Z3E1 657 aaKnown RBP5.13□□□□□ -1.59
CD44-231ENST00000531110 P2RY8Q86VZ1 359 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 AQP12AQ8IXF9 295 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 PRSS58Q8IYP2 241 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 ZDHHC23Q8IYP9 409 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 DHRSXQ8N5I4 330 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 PARP16Q8N5Y8 322 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 CLEC18CQ8NCF0 446 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 ZNF548Q8NEK5 533 aaPredicted RBP5.13□□□□□ -1.59
CD44-231ENST00000531110 OR2L2Q8NH16 312 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 TERB2Q8NHR7 220 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 C2CD4CQ8TF44 421 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 RGP1Q92546 391 aaPredicted RBP5.13□□□□□ -1.59
CD44-231ENST00000531110 KCNJ9Q92806 393 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 HAS2Q92819 552 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 MRGPRFQ96AM1 343 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 CMTM7Q96FZ5 175 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 SAMD8Q96LT4 415 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 ERMAPQ96PL5 475 aaPredicted RBP5.13□□□□□ -1.59
CD44-231ENST00000531110 RBP7Q96R05 134 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 SLC22A12Q96S37 553 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 MARVELD1Q9BSK0 173 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 BEX2Q9BXY8 128 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 LRRC2Q9BYS8 371 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 LHPPQ9H008 270 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 PCBD2Q9H0N5 130 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 PPP1R3EQ9H7J1 279 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 COQ10BQ9H8M1 238 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 MKKSQ9NPJ1 570 aaPredicted RBP5.13□□□□□ -1.59
CD44-231ENST00000531110 MIEF1Q9NQG6 463 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 CENPMQ9NSP4 180 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 SLCO3A1Q9UIG8 710 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 FBXO4Q9UKT5 387 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 TBC1D24Q9ULP9 559 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 NENFQ9UMX5 172 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 EXOGQ9Y2C4 368 aaKnown RBP5.13□□□□□ -1.59
CD44-231ENST00000531110 CLCA3PQ9Y6N3 262 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 ADAMTS13Q76LX8 1427 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 CROCCQ5TZA2 2017 aa5.13□□□□□ -1.59
CD44-231ENST00000531110 USP54Q70EL1 1684 aa5.12□□□□□ -1.59
CD44-231ENST00000531110 FMN2Q9NZ56 1722 aa5.12□□□□□ -1.59
CD44-231ENST00000531110 LAMA4Q16363 1823 aa5.12□□□□□ -1.59
CD44-231ENST00000531110 A0A0U1RQF3 1178 aa5.12□□□□□ -1.59
CD44-231ENST00000531110 A0A1B0GV72 72 aa5.12□□□□□ -1.59
CD44-231ENST00000531110 FAM230AA0A1W2PPH8 454 aa5.12□□□□□ -1.59
CD44-231ENST00000531110 A8MWP6 167 aa5.12□□□□□ -1.59
CD44-231ENST00000531110 B4DXG7 233 aa5.12□□□□□ -1.59
CD44-231ENST00000531110 H3BQ06 376 aaPredicted RBP5.12□□□□□ -1.59
CD44-231ENST00000531110 M0R143 59 aa5.12□□□□□ -1.59
CD44-231ENST00000531110 GTPBP1O00178 669 aaKnown RBP5.12□□□□□ -1.59
CD44-231ENST00000531110 DFFAO00273 331 aa5.12□□□□□ -1.59
CD44-231ENST00000531110 PDCD5O14737 125 aa5.12□□□□□ -1.59
CD44-231ENST00000531110 SLC16A4O15374 487 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms