RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 EBNA1BP2Q99848 306 aaKnown RBP5.97□□□□□ -1.45
CSDE1-213ENST00000530784 KIFC1Q9BW19 673 aa5.97□□□□□ -1.45
CSDE1-213ENST00000530784 TSGA10Q9BZW7 698 aa5.97□□□□□ -1.45
CSDE1-213ENST00000530784 STMN3Q9NZ72 180 aa5.97□□□□□ -1.45
CSDE1-213ENST00000530784 RPS6KA6Q9UK32 745 aa5.97□□□□□ -1.45
CSDE1-213ENST00000530784 NBPF19A0A087WUL8 3843 aa5.96□□□□□ -1.46
CSDE1-213ENST00000530784 H0YIG0 161 aa5.96□□□□□ -1.46
CSDE1-213ENST00000530784 ADAMDEC1O15204 470 aa5.96□□□□□ -1.46
CSDE1-213ENST00000530784 TTI1O43156 1089 aa5.96□□□□□ -1.46
CSDE1-213ENST00000530784 ZWINTO95229 277 aa5.96□□□□□ -1.46
CSDE1-213ENST00000530784 NSA2O95478 260 aaKnown RBP5.96□□□□□ -1.46
CSDE1-213ENST00000530784 STATHP02808 62 aa5.96□□□□□ -1.46
CSDE1-213ENST00000530784 TPSB2P20231 275 aa5.96□□□□□ -1.46
CSDE1-213ENST00000530784 EEF1DP29692 281 aaKnown RBP5.96□□□□□ -1.46
CSDE1-213ENST00000530784 XCR1P46094 333 aa5.96□□□□□ -1.46
CSDE1-213ENST00000530784 SMSP52788 366 aa5.96□□□□□ -1.46
CSDE1-213ENST00000530784 EFNA3P52797 238 aa5.96□□□□□ -1.46
CSDE1-213ENST00000530784 RIPPLY3P57055 190 aa5.96□□□□□ -1.46
CSDE1-213ENST00000530784 IRX1P78414 480 aaPredicted RBP5.96□□□□□ -1.46
CSDE1-213ENST00000530784 CDK16Q00536 496 aa5.96□□□□□ -1.46
CSDE1-213ENST00000530784 CUL1Q13616 776 aa5.96□□□□□ -1.46
CSDE1-213ENST00000530784 PTK6Q13882 451 aa5.96□□□□□ -1.46
CSDE1-213ENST00000530784 KCNJ11Q14654 390 aa5.96□□□□□ -1.46
CSDE1-213ENST00000530784 RPS6KA1Q15418 735 aa5.96□□□□□ -1.46
CSDE1-213ENST00000530784 TPSAB1Q15661 275 aa5.96□□□□□ -1.46
CSDE1-213ENST00000530784 IGSF11Q5DX21 431 aa5.96□□□□□ -1.46
CSDE1-213ENST00000530784 ACER2Q5QJU3 275 aa5.96□□□□□ -1.46
CSDE1-213ENST00000530784 ZNF470Q6ECI4 717 aa5.96□□□□□ -1.46
CSDE1-213ENST00000530784 NEPROQ6NW34 567 aa5.96□□□□□ -1.46
CSDE1-213ENST00000530784 CASC4Q6P4E1 433 aa5.96□□□□□ -1.46
CSDE1-213ENST00000530784 XKRXQ6PP77 449 aa5.96□□□□□ -1.46
CSDE1-213ENST00000530784 CES3Q6UWW8 571 aa5.96□□□□□ -1.46
CSDE1-213ENST00000530784 LANCL3Q6ZV70 420 aa5.96□□□□□ -1.46
CSDE1-213ENST00000530784 CPEB2Q7Z5Q1 589 aaKnown RBP5.96□□□□□ -1.46
CSDE1-213ENST00000530784 TMEM139Q8IV31 216 aa5.96□□□□□ -1.46
CSDE1-213ENST00000530784 OR9A4Q8NGU2 314 aa5.96□□□□□ -1.46
CSDE1-213ENST00000530784 OR2AJ1Q8NGZ0 328 aa5.96□□□□□ -1.46
CSDE1-213ENST00000530784 LURAP1Q96LR2 239 aa5.96□□□□□ -1.46
CSDE1-213ENST00000530784 VN1R1Q9GZP7 353 aa5.96□□□□□ -1.46
CSDE1-213ENST00000530784 WDR13Q9H1Z4 485 aa5.96□□□□□ -1.46
CSDE1-213ENST00000530784 KCNK13Q9HB14 408 aa5.96□□□□□ -1.46
CSDE1-213ENST00000530784 A4GALTQ9NPC4 353 aa5.96□□□□□ -1.46
CSDE1-213ENST00000530784 CCDC177Q9NQR7 707 aaPredicted RBP5.96□□□□□ -1.46
CSDE1-213ENST00000530784 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.96□□□□□ -1.46
CSDE1-213ENST00000530784 GALPQ9UBC7 116 aa5.96□□□□□ -1.46
CSDE1-213ENST00000530784 ABCA12Q86UK0 2595 aa5.96□□□□□ -1.46
CSDE1-213ENST00000530784 LRBAP50851 2863 aa5.96□□□□□ -1.46
CSDE1-213ENST00000530784 PIKFYVEQ9Y2I7 2098 aa5.95□□□□□ -1.46
CSDE1-213ENST00000530784 HIVEP3Q5T1R4 2406 aa5.95□□□□□ -1.46
CSDE1-213ENST00000530784 ITPR2Q14571 2701 aa5.95□□□□□ -1.46
CSDE1-213ENST00000530784 GLOD5A6NK44 160 aa5.95□□□□□ -1.46
CSDE1-213ENST00000530784 ZBTB14O43829 449 aa5.95□□□□□ -1.46
CSDE1-213ENST00000530784 AHCYL1O43865 530 aa5.95□□□□□ -1.46
CSDE1-213ENST00000530784 KIF5CO60282 957 aa5.95□□□□□ -1.46
CSDE1-213ENST00000530784 MPC1LP0DKB6 136 aa5.95□□□□□ -1.46
CSDE1-213ENST00000530784 IL1RNP18510 177 aa5.95□□□□□ -1.46
CSDE1-213ENST00000530784 IMPA1P29218 277 aa5.95□□□□□ -1.46
CSDE1-213ENST00000530784 CLK1P49759 484 aaKnown RBP5.95□□□□□ -1.46
CSDE1-213ENST00000530784 RPS15AP62244 130 aaKnown RBP5.95□□□□□ -1.46
CSDE1-213ENST00000530784 TBPL1P62380 186 aa5.95□□□□□ -1.46
CSDE1-213ENST00000530784 SARNPP82979 210 aaKnown RBP5.95□□□□□ -1.46
CSDE1-213ENST00000530784 OC90Q02509 493 aaPredicted RBP5.95□□□□□ -1.46
CSDE1-213ENST00000530784 SIX1Q15475 284 aaPredicted RBP5.95□□□□□ -1.46
CSDE1-213ENST00000530784 OR1C1Q15619 314 aa5.95□□□□□ -1.46
CSDE1-213ENST00000530784 EXT1Q16394 746 aa5.95□□□□□ -1.46
CSDE1-213ENST00000530784 C3AR1Q16581 482 aa5.95□□□□□ -1.46
CSDE1-213ENST00000530784 ARMC3Q5W041 872 aa5.95□□□□□ -1.46
CSDE1-213ENST00000530784 BHLHB9Q6PI77 547 aa5.95□□□□□ -1.46
CSDE1-213ENST00000530784 CENPUQ71F23 418 aa5.95□□□□□ -1.46
CSDE1-213ENST00000530784 PRSS41Q7RTY9 318 aa5.95□□□□□ -1.46
CSDE1-213ENST00000530784 VN1R4Q7Z5H5 301 aa5.95□□□□□ -1.46
CSDE1-213ENST00000530784 ANKRD37Q7Z713 158 aa5.95□□□□□ -1.46
CSDE1-213ENST00000530784 CRLF3Q8IUI8 442 aa5.95□□□□□ -1.46
CSDE1-213ENST00000530784 PRELID2Q8N945 189 aa5.95□□□□□ -1.46
CSDE1-213ENST00000530784 TMEM178AQ8NBL3 297 aa5.95□□□□□ -1.46
CSDE1-213ENST00000530784 MDS2Q8NDY4 140 aa5.95□□□□□ -1.46
CSDE1-213ENST00000530784 OR51Q1Q8NH59 317 aa5.95□□□□□ -1.46
CSDE1-213ENST00000530784 MAIP1Q8WWC4 291 aa5.95□□□□□ -1.46
CSDE1-213ENST00000530784 GMPPAQ96IJ6 420 aaPredicted RBP5.95□□□□□ -1.46
CSDE1-213ENST00000530784 NSL1Q96IY1 281 aa5.95□□□□□ -1.46
CSDE1-213ENST00000530784 GPR137Q96N19 417 aa5.95□□□□□ -1.46
CSDE1-213ENST00000530784 PRAP1Q96NZ9 151 aa5.95□□□□□ -1.46
CSDE1-213ENST00000530784 SIGLEC12Q96PQ1 595 aa5.95□□□□□ -1.46
CSDE1-213ENST00000530784 CYTH2Q99418 400 aa5.95□□□□□ -1.46
CSDE1-213ENST00000530784 UTP23Q9BRU9 249 aaKnown RBP5.95□□□□□ -1.46
CSDE1-213ENST00000530784 ANKHQ9HCJ1 492 aa5.95□□□□□ -1.46
CSDE1-213ENST00000530784 TMEM181Q9P2C4 612 aa5.95□□□□□ -1.46
CSDE1-213ENST00000530784 GUCA1BQ9UMX6 200 aa5.95□□□□□ -1.46
CSDE1-213ENST00000530784 CRYBG3Q68DQ2 2970 aa5.95□□□□□ -1.46
CSDE1-213ENST00000530784 PRRC2CQ9Y520 2896 aaKnown RBP5.95□□□□□ -1.46
CSDE1-213ENST00000530784 NOTCH3Q9UM47 2321 aa5.94□□□□□ -1.46
CSDE1-213ENST00000530784 CENPEQ02224 2701 aa5.94□□□□□ -1.46
CSDE1-213ENST00000530784 OTOGQ6ZRI0 2925 aa5.94□□□□□ -1.46
CSDE1-213ENST00000530784 KCNE1BA0A087WTH5 132 aa5.94□□□□□ -1.46
CSDE1-213ENST00000530784 MEIOCA2RUB1 952 aa5.94□□□□□ -1.46
CSDE1-213ENST00000530784 GABRR3A8MPY1 467 aa5.94□□□□□ -1.46
CSDE1-213ENST00000530784 NPIPA5E9PKD4 350 aa5.94□□□□□ -1.46
CSDE1-213ENST00000530784 GFYI3L273 518 aa5.94□□□□□ -1.46
CSDE1-213ENST00000530784 SGK494L7N484 410 aa5.94□□□□□ -1.46
CSDE1-213ENST00000530784 ATP6V0E1O15342 81 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms