RNA–Protein interactions for RNA: ENST00000529558.1

AMBRA1-208, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 5

Gene AMBRA1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-208ENST00000529558 ACOT8O14734 319 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 HSD17B6O14756 317 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 EIF3HO15372 352 aaKnown RBP eCLIP2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 PSTPIP1O43586 416 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 CHMP2AO43633 222 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 PRKYO43930 277 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 TGM6O95932 706 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 MBP02144 154 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 STAG3L2P0CL84 134 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 T-ENOLP0DO92 83 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 RNH1P13489 461 aaKnown RBP2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 PVRP15151 417 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 COX5AP20674 150 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 STOMP27105 288 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 GTF2E2P29084 291 aaKnown RBP2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 FGF9P31371 208 aaPredicted RBP2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 YWHABP31946 246 aaKnown RBP2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 IFNA8P32881 189 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 DAP3P51398 398 aaKnown RBP2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 PRKXP51817 358 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 HNRNPA3P51991 378 aaKnown RBP2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 ARHGDIAP52565 204 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 LIM2P55344 173 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 RIPK4P57078 832 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 SLC8A3P57103 927 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 ERVFC1-1P60608 527 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 YWHAGP61981 247 aaKnown RBP eCLIP2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 SNRPD1P62314 119 aaKnown RBP2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 XIAPP98170 497 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 FKBP3Q00688 224 aaKnown RBP2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 ZFP36L1Q07352 338 aaKnown RBP2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 DUSP7Q16829 419 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 HNRNPA1L2Q32P51 320 aaKnown RBP2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 Q3ZCU0 254 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 ZNF672Q499Z4 452 aaPredicted RBP2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 ADAMTSL4-AS1Q5T5F5 129 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 LIN9Q5TKA1 542 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 TWF2Q6IBS0 349 aaKnown RBP2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 FAM199XQ6PEV8 388 aaPredicted RBP2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 HSDL2Q6YN16 418 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 GDPGP1Q6ZNW5 385 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 LRRC74BQ6ZQY2 392 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 NIPA1Q7RTP0 329 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 LINC00523Q86TU6 105 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 ERICH1Q86X53 443 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 ZFAND4Q86XD8 727 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 MARCH9Q86YJ5 346 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 TPRX1Q8N7U7 411 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 B3GNT7Q8NFL0 401 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 RHEBL1Q8TAI7 183 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 GPR151Q8TDV0 419 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 MRPS31Q92665 395 aaKnown RBP2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 C8orf44Q96CB5 159 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 TMEM80Q96HE8 168 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 C9orf85Q96MD7 179 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 CYP2S1Q96SQ9 504 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 RNF2Q99496 336 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 IL22Q9GZX6 179 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 AGPAT3Q9NRZ7 376 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 PLCXD1Q9NUJ7 323 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 ANGPTL2Q9UKU9 493 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 SAMD4AQ9UPU9 718 aaKnown RBP2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 ABCC5O15440 1437 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 FGD6Q6ZV73 1430 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 TIAM1Q13009 1591 aa2.9□□□□□ -1.95
AMBRA1-208ENST00000529558 ARHGEF12Q9NZN5 1544 aa2.89□□□□□ -1.95
AMBRA1-208ENST00000529558 IGHV3OR16-12A0A075B7B8 117 aa2.89□□□□□ -1.95
AMBRA1-208ENST00000529558 IGHV4-30-2A0A087WSY4 118 aa2.89□□□□□ -1.95
AMBRA1-208ENST00000529558 IQANK1A0A1B0GTG1 560 aa2.89□□□□□ -1.95
AMBRA1-208ENST00000529558 A0A1W2PPV4 95 aa2.89□□□□□ -1.95
AMBRA1-208ENST00000529558 TRABD2BA6NFA1 517 aa2.89□□□□□ -1.95
AMBRA1-208ENST00000529558 TRDCB7Z8K6 153 aa2.89□□□□□ -1.95
AMBRA1-208ENST00000529558 E7ESA3 106 aa2.89□□□□□ -1.95
AMBRA1-208ENST00000529558 NTN3O00634 580 aaPredicted RBP2.89□□□□□ -1.95
AMBRA1-208ENST00000529558 CHD1O14646 1710 aa2.89□□□□□ -1.95
AMBRA1-208ENST00000529558 YKT6O15498 198 aa2.89□□□□□ -1.95
AMBRA1-208ENST00000529558 IGKV2-30P06310 120 aa2.89□□□□□ -1.95
AMBRA1-208ENST00000529558 HCKP08631 526 aa2.89□□□□□ -1.95
AMBRA1-208ENST00000529558 PATE4P0C8F1 98 aa2.89□□□□□ -1.95
AMBRA1-208ENST00000529558 UMPSP11172 480 aa2.89□□□□□ -1.95
AMBRA1-208ENST00000529558 PTNP21246 168 aa2.89□□□□□ -1.95
AMBRA1-208ENST00000529558 PRKACBP22694 351 aa2.89□□□□□ -1.95
AMBRA1-208ENST00000529558 RRM2P31350 389 aa2.89□□□□□ -1.95
AMBRA1-208ENST00000529558 SPRP35270 261 aaPredicted RBP2.89□□□□□ -1.95
AMBRA1-208ENST00000529558 LONP1P36776 959 aaKnown RBP2.89□□□□□ -1.95
AMBRA1-208ENST00000529558 DDOSTP39656 456 aa2.89□□□□□ -1.95
AMBRA1-208ENST00000529558 VHLP40337 213 aa2.89□□□□□ -1.95
AMBRA1-208ENST00000529558 ELK3P41970 407 aa2.89□□□□□ -1.95
AMBRA1-208ENST00000529558 OR1D4P47884 311 aa2.89□□□□□ -1.95
AMBRA1-208ENST00000529558 RFX3P48380 749 aa2.89□□□□□ -1.95
AMBRA1-208ENST00000529558 THBS3P49746 956 aa2.89□□□□□ -1.95
AMBRA1-208ENST00000529558 ATP4BP51164 291 aa2.89□□□□□ -1.95
AMBRA1-208ENST00000529558 RIDAP52758 137 aaKnown RBP2.89□□□□□ -1.95
AMBRA1-208ENST00000529558 NDUFV3P56181 108 aaKnown RBP2.89□□□□□ -1.95
AMBRA1-208ENST00000529558 NANOS3P60323 173 aaKnown RBP2.89□□□□□ -1.95
AMBRA1-208ENST00000529558 RAB10P61026 200 aa2.89□□□□□ -1.95
AMBRA1-208ENST00000529558 GNB1P62873 340 aa2.89□□□□□ -1.95
AMBRA1-208ENST00000529558 GRB7Q14451 532 aa2.89□□□□□ -1.95
AMBRA1-208ENST00000529558 KCNJ11Q14654 390 aa2.89□□□□□ -1.95
AMBRA1-208ENST00000529558 EIPR1Q53HC9 387 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms