RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	CDK5	Q00535	292 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	CD83	Q01151	205 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	MXD1	Q05195	221 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	RAB40B	Q12829	278 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	PLET1	Q6UQ28	207 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	SHISA6	Q6ZSJ9	500 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	ZNF767P	Q75MW2	155 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	UTS2B	Q765I0	119 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	CPEB2	Q7Z5Q1	589 aa	Known RBP	13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	ANKRD37	Q7Z713	158 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	MRGPRE	Q86SM8	312 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	UFD1	Q92890	307 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	ZNF607	Q96SK3	696 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	COQ7	Q99807	217 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	RSPO3	Q9BXY4	272 aa	Predicted RBP	13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	TVP23B	Q9NYZ1	205 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	PRODH2	Q9UF12	536 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	C19orf53	Q9UNZ5	99 aa	Predicted RBP	13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	GSTK1	Q9Y2Q3	226 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	TRDV1	A0A1B0GX56	115 aa		13.39	□□□□□ -0.27
NR1H3-231	ENST00000529540	SLC43A1	O75387	559 aa		13.39	□□□□□ -0.27
NR1H3-231	ENST00000529540	AGR2	O95994	175 aa		13.39	□□□□□ -0.27
NR1H3-231	ENST00000529540	PRKAR1A	P10644	381 aa		13.39	□□□□□ -0.27
NR1H3-231	ENST00000529540	ACP2	P11117	423 aa		13.39	□□□□□ -0.27
NR1H3-231	ENST00000529540	DUSP2	Q05923	314 aa		13.39	□□□□□ -0.27
NR1H3-231	ENST00000529540	FUT7	Q11130	342 aa		13.39	□□□□□ -0.27
NR1H3-231	ENST00000529540	GINS1	Q14691	196 aa		13.39	□□□□□ -0.27
NR1H3-231	ENST00000529540	FAM209A	Q5JX71	171 aa		13.39	□□□□□ -0.27
NR1H3-231	ENST00000529540	ENTPD8	Q5MY95	495 aa		13.39	□□□□□ -0.27
NR1H3-231	ENST00000529540	TRIQK	Q629K1	86 aa		13.39	□□□□□ -0.27
NR1H3-231	ENST00000529540	SZRD1	Q7Z422	152 aa		13.39	□□□□□ -0.27
NR1H3-231	ENST00000529540	BCDIN3D	Q7Z5W3	292 aa	Known RBP	13.39	□□□□□ -0.27
NR1H3-231	ENST00000529540	SHISA5	Q8N114	240 aa		13.39	□□□□□ -0.27
NR1H3-231	ENST00000529540	YIPF7	Q8N8F6	280 aa		13.39	□□□□□ -0.27
NR1H3-231	ENST00000529540	NUP43	Q8NFH3	380 aa		13.39	□□□□□ -0.27
NR1H3-231	ENST00000529540	OR4D11	Q8NGI4	311 aa		13.39	□□□□□ -0.27
NR1H3-231	ENST00000529540	UBASH3B	Q8TF42	649 aa		13.39	□□□□□ -0.27
NR1H3-231	ENST00000529540	RYDEN	Q9NUL5	291 aa	Known RBP	13.39	□□□□□ -0.27
NR1H3-231	ENST00000529540	A4GNT	Q9UNA3	340 aa		13.39	□□□□□ -0.27
NR1H3-231	ENST00000529540	WASF3	Q9UPY6	502 aa		13.39	□□□□□ -0.27
NR1H3-231	ENST00000529540	ALG5	Q9Y673	324 aa		13.39	□□□□□ -0.27
NR1H3-231	ENST00000529540	PIEZO1	Q92508	2521 aa		13.39	□□□□□ -0.27
NR1H3-231	ENST00000529540	NUP214	P35658	2090 aa	Predicted RBP	13.39	□□□□□ -0.27
NR1H3-231	ENST00000529540	OR6C70	A6NIJ9	312 aa		13.38	□□□□□ -0.27
NR1H3-231	ENST00000529540	DUXA	A6NLW8	204 aa		13.38	□□□□□ -0.27
NR1H3-231	ENST00000529540	OR6C76	A6NM76	312 aa		13.38	□□□□□ -0.27
NR1H3-231	ENST00000529540	SNTN	A6NMZ2	147 aa		13.38	□□□□□ -0.27
NR1H3-231	ENST00000529540	TERT	O14746	1132 aa	Known RBP	13.38	□□□□□ -0.27
NR1H3-231	ENST00000529540	TLX2	O43763	284 aa	Predicted RBP	13.38	□□□□□ -0.27
NR1H3-231	ENST00000529540	NME6	O75414	186 aa	Predicted RBP	13.38	□□□□□ -0.27
NR1H3-231	ENST00000529540	UMOD	P07911	640 aa		13.38	□□□□□ -0.27
NR1H3-231	ENST00000529540	GSTM3	P21266	225 aa		13.38	□□□□□ -0.27
NR1H3-231	ENST00000529540	P2RX3	P56373	397 aa		13.38	□□□□□ -0.27
NR1H3-231	ENST00000529540	RAB25	P57735	213 aa		13.38	□□□□□ -0.27
NR1H3-231	ENST00000529540	ZNF267	Q14586	743 aa	Predicted RBP	13.38	□□□□□ -0.27
NR1H3-231	ENST00000529540	LTB4R	Q15722	352 aa		13.38	□□□□□ -0.27
NR1H3-231	ENST00000529540	TATDN3	Q17R31	274 aa		13.38	□□□□□ -0.27
NR1H3-231	ENST00000529540	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	13.38	□□□□□ -0.27
NR1H3-231	ENST00000529540	PODNL1	Q6PEZ8	512 aa		13.38	□□□□□ -0.27
NR1H3-231	ENST00000529540	DEF8	Q6ZN54	512 aa		13.38	□□□□□ -0.27
NR1H3-231	ENST00000529540	C6orf120	Q7Z4R8	191 aa		13.38	□□□□□ -0.27
NR1H3-231	ENST00000529540	IQCF1	Q8N6M8	205 aa		13.38	□□□□□ -0.27
NR1H3-231	ENST00000529540	C19orf18	Q8NEA5	215 aa		13.38	□□□□□ -0.27
NR1H3-231	ENST00000529540	SLC7A13	Q8TCU3	470 aa		13.38	□□□□□ -0.27
NR1H3-231	ENST00000529540	PTPMT1	Q8WUK0	201 aa	Predicted RBP	13.38	□□□□□ -0.27
NR1H3-231	ENST00000529540	KAT2A	Q92830	837 aa		13.38	□□□□□ -0.27
NR1H3-231	ENST00000529540	SLC35G5	Q96KT7	338 aa		13.38	□□□□□ -0.27
NR1H3-231	ENST00000529540	PPIE	Q9UNP9	301 aa	Known RBP	13.38	□□□□□ -0.27
NR1H3-231	ENST00000529540	SDK2	Q58EX2	2172 aa		13.38	□□□□□ -0.27
NR1H3-231	ENST00000529540		A0A0G2JMP0	313 aa		13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540		A0A1W2PS29	197 aa		13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	OR2W5	A6NFC9	320 aa		13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	PRODH	O43272	600 aa		13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	SLC2A2	P11168	524 aa	Predicted RBP	13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	ICAM2	P13598	275 aa		13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	CFL1	P23528	166 aa	Known RBP	13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	GIPR	P48546	466 aa		13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	PGD	P52209	483 aa		13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	SMS	P52788	366 aa		13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	MGAT2	Q10469	447 aa		13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	ZNHIT3	Q15649	155 aa	Predicted RBP	13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	EXT1	Q16394	746 aa		13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	C1orf94	Q6P1W5	598 aa		13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	CNIH2	Q6PI25	160 aa		13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	PAPD4	Q6PIY7	484 aa	Known RBP	13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	CREB3L2	Q70SY1	520 aa		13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	CDRT4	Q8N9R6	151 aa		13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	ATP6V1C2	Q8NEY4	427 aa		13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	OR7G2	Q8NG99	324 aa		13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	OR1N1	Q8NGS0	311 aa		13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	OR52P1P	Q8NH57	321 aa		13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	TM9SF4	Q92544	642 aa		13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	LRR1	Q96L50	414 aa		13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	MARVELD1	Q9BSK0	173 aa		13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	TMEM43	Q9BTV4	400 aa		13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	DKK4	Q9UBT3	224 aa		13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	ERVK-19	Q9WJR5	959 aa		13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	LOC101059948	A0A1B0GTJ6	334 aa		13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	KDM4E	B2RXH2	506 aa	Predicted RBP	13.37	□□□□□ -0.27
NR1H3-231	ENST00000529540	HMGN4	O00479	90 aa		13.37	□□□□□ -0.27

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