RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 MKLN1Q9UL63 735 aa7.56□□□□□ -1.2
SSBP3-212ENST00000528930 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.55□□□□□ -1.2
SSBP3-212ENST00000528930 A0A0J9YW62 118 aa7.55□□□□□ -1.2
SSBP3-212ENST00000528930 TUBAL3A6NHL2 446 aa7.55□□□□□ -1.2
SSBP3-212ENST00000528930 SLC22A20A6NK97 555 aa7.55□□□□□ -1.2
SSBP3-212ENST00000528930 H3BNH8 94 aa7.55□□□□□ -1.2
SSBP3-212ENST00000528930 ETV2O00321 342 aaPredicted RBP7.55□□□□□ -1.2
SSBP3-212ENST00000528930 ADAMDEC1O15204 470 aa7.55□□□□□ -1.2
SSBP3-212ENST00000528930 ZNF264O43296 627 aa7.55□□□□□ -1.2
SSBP3-212ENST00000528930 KIAA0513O60268 411 aa7.55□□□□□ -1.2
SSBP3-212ENST00000528930 EIF4E2O60573 245 aaKnown RBP7.55□□□□□ -1.2
SSBP3-212ENST00000528930 HNRNPCL1O60812 293 aaKnown RBP7.55□□□□□ -1.2
SSBP3-212ENST00000528930 DNAJA2O60884 412 aa7.55□□□□□ -1.2
SSBP3-212ENST00000528930 TNFSF13O75888 250 aa7.55□□□□□ -1.2
SSBP3-212ENST00000528930 NTN1O95631 604 aa7.55□□□□□ -1.2
SSBP3-212ENST00000528930 AGR2O95994 175 aa7.55□□□□□ -1.2
SSBP3-212ENST00000528930 OPN1LWP04000 364 aa7.55□□□□□ -1.2
SSBP3-212ENST00000528930 NQO1P15559 274 aaKnown RBP7.55□□□□□ -1.2
SSBP3-212ENST00000528930 PRKCAP17252 672 aa7.55□□□□□ -1.2
SSBP3-212ENST00000528930 IL11P20809 199 aa7.55□□□□□ -1.2
SSBP3-212ENST00000528930 SHC1P29353 583 aa7.55□□□□□ -1.2
SSBP3-212ENST00000528930 CHI3L1P36222 383 aaPredicted RBP7.55□□□□□ -1.2
SSBP3-212ENST00000528930 KIR2DL2P43627 348 aaPredicted RBP7.55□□□□□ -1.2
SSBP3-212ENST00000528930 ZNF41P51814 821 aaPredicted RBP7.55□□□□□ -1.2
SSBP3-212ENST00000528930 POLR2JP52435 117 aaKnown RBP7.55□□□□□ -1.2
SSBP3-212ENST00000528930 AQP5P55064 265 aa7.55□□□□□ -1.2
SSBP3-212ENST00000528930 CHRNEQ04844 493 aa7.55□□□□□ -1.2
SSBP3-212ENST00000528930 BNIP1Q12981 228 aa7.55□□□□□ -1.2
SSBP3-212ENST00000528930 SKP2Q13309 424 aa7.55□□□□□ -1.2
SSBP3-212ENST00000528930 DYNC1I2Q13409 638 aaKnown RBP7.55□□□□□ -1.2
SSBP3-212ENST00000528930 FGFBP1Q14512 234 aa7.55□□□□□ -1.2
SSBP3-212ENST00000528930 POU4F3Q15319 338 aa7.55□□□□□ -1.2
SSBP3-212ENST00000528930 MAPK11Q15759 364 aa7.55□□□□□ -1.2
SSBP3-212ENST00000528930 SYPL1Q16563 259 aa7.55□□□□□ -1.2
SSBP3-212ENST00000528930 GTDC1Q4AE62 458 aa7.55□□□□□ -1.2
SSBP3-212ENST00000528930 SLC25A53Q5H9E4 307 aa7.55□□□□□ -1.2
SSBP3-212ENST00000528930 COX20Q5RI15 118 aa7.55□□□□□ -1.2
SSBP3-212ENST00000528930 C6orf52Q5T4I8 152 aa7.55□□□□□ -1.2
SSBP3-212ENST00000528930 LIPNQ5VXI9 398 aa7.55□□□□□ -1.2
SSBP3-212ENST00000528930 MSANTD1Q6ZTZ1 278 aa7.55□□□□□ -1.2
SSBP3-212ENST00000528930 TRPM8Q7Z2W7 1104 aa7.55□□□□□ -1.2
SSBP3-212ENST00000528930 C16orf62Q7Z3J2 963 aa7.55□□□□□ -1.2
SSBP3-212ENST00000528930 GRAMD2AQ8IUY3 354 aa7.55□□□□□ -1.2
SSBP3-212ENST00000528930 FUNDC1Q8IVP5 155 aa7.55□□□□□ -1.2
SSBP3-212ENST00000528930 GCNT2Q8N0V5 402 aa7.55□□□□□ -1.2
SSBP3-212ENST00000528930 MIER2Q8N344 545 aa7.55□□□□□ -1.2
SSBP3-212ENST00000528930 TRIML2Q8N7C3 387 aa7.55□□□□□ -1.2
SSBP3-212ENST00000528930 DRAXINQ8NBI3 349 aaPredicted RBP7.55□□□□□ -1.2
SSBP3-212ENST00000528930 FBXO27Q8NI29 283 aa7.55□□□□□ -1.2
SSBP3-212ENST00000528930 FNDC9Q8TBE3 224 aa7.55□□□□□ -1.2
SSBP3-212ENST00000528930 OIT3Q8WWZ8 545 aa7.55□□□□□ -1.2
SSBP3-212ENST00000528930 IGFBPL1Q8WX77 278 aa7.55□□□□□ -1.2
SSBP3-212ENST00000528930 VPS33AQ96AX1 596 aa7.55□□□□□ -1.2
SSBP3-212ENST00000528930 STARD4Q96DR4 205 aa7.55□□□□□ -1.2
SSBP3-212ENST00000528930 SPDL1Q96EA4 605 aa7.55□□□□□ -1.2
SSBP3-212ENST00000528930 MAGEB18Q96M61 343 aa7.55□□□□□ -1.2
SSBP3-212ENST00000528930 ZBTB18Q99592 522 aa7.55□□□□□ -1.2
SSBP3-212ENST00000528930 SFXN3Q9BWM7 321 aa7.55□□□□□ -1.2
SSBP3-212ENST00000528930 PINK1Q9BXM7 581 aa7.55□□□□□ -1.2
SSBP3-212ENST00000528930 LAT2Q9GZY6 243 aa7.55□□□□□ -1.2
SSBP3-212ENST00000528930 ZNF696Q9H7X3 374 aa7.55□□□□□ -1.2
SSBP3-212ENST00000528930 RNF122Q9H9V4 155 aa7.55□□□□□ -1.2
SSBP3-212ENST00000528930 SLC52A3Q9NQ40 469 aa7.55□□□□□ -1.2
SSBP3-212ENST00000528930 POLE3Q9NRF9 147 aa7.55□□□□□ -1.2
SSBP3-212ENST00000528930 FOXD3Q9UJU5 478 aaPredicted RBP7.55□□□□□ -1.2
SSBP3-212ENST00000528930 ZNF175Q9Y473 711 aa7.55□□□□□ -1.2
SSBP3-212ENST00000528930 A0A1W2PNV4 684 aa7.54□□□□□ -1.2
SSBP3-212ENST00000528930 FAM234BA2RU67 622 aa7.54□□□□□ -1.2
SSBP3-212ENST00000528930 GTPBP1O00178 669 aaKnown RBP7.54□□□□□ -1.2
SSBP3-212ENST00000528930 RFXANKO14593 260 aa7.54□□□□□ -1.2
SSBP3-212ENST00000528930 EIF1AYO14602 144 aaKnown RBP7.54□□□□□ -1.2
SSBP3-212ENST00000528930 BCAS1O75363 584 aaPredicted RBP7.54□□□□□ -1.2
SSBP3-212ENST00000528930 AQP8O94778 261 aa7.54□□□□□ -1.2
SSBP3-212ENST00000528930 H6PDO95479 791 aa7.54□□□□□ -1.2
SSBP3-212ENST00000528930 CSTAP01040 98 aa7.54□□□□□ -1.2
SSBP3-212ENST00000528930 CGAP01215 116 aa7.54□□□□□ -1.2
SSBP3-212ENST00000528930 CRHP06850 196 aa7.54□□□□□ -1.2
SSBP3-212ENST00000528930 CHRM4P08173 479 aa7.54□□□□□ -1.2
SSBP3-212ENST00000528930 ZCCHC18P0CG32 403 aa7.54□□□□□ -1.2
SSBP3-212ENST00000528930 UBL4AP11441 157 aa7.54□□□□□ -1.2
SSBP3-212ENST00000528930 HOXB9P17482 250 aaPredicted RBP7.54□□□□□ -1.2
SSBP3-212ENST00000528930 PGM1P36871 562 aa7.54□□□□□ -1.2
SSBP3-212ENST00000528930 EIF1P41567 113 aaKnown RBP7.54□□□□□ -1.2
SSBP3-212ENST00000528930 EIF1AXP47813 144 aaKnown RBP7.54□□□□□ -1.2
SSBP3-212ENST00000528930 SLC6A8P48029 635 aa7.54□□□□□ -1.2
SSBP3-212ENST00000528930 COMPP49747 757 aaPredicted RBP7.54□□□□□ -1.2
SSBP3-212ENST00000528930 KHKP50053 298 aa7.54□□□□□ -1.2
SSBP3-212ENST00000528930 RPS6KA3P51812 740 aa7.54□□□□□ -1.2
SSBP3-212ENST00000528930 SUMO3P55854 103 aaPredicted RBP7.54□□□□□ -1.2
SSBP3-212ENST00000528930 RPS3AP61247 264 aaKnown RBP7.54□□□□□ -1.2
SSBP3-212ENST00000528930 TXNL4AP83876 142 aaKnown RBP7.54□□□□□ -1.2
SSBP3-212ENST00000528930 FOXF1Q12946 379 aa7.54□□□□□ -1.2
SSBP3-212ENST00000528930 PON3Q15166 354 aa7.54□□□□□ -1.2
SSBP3-212ENST00000528930 GUSBP1Q15486 140 aa7.54□□□□□ -1.2
SSBP3-212ENST00000528930 TIGD2Q4W5G0 525 aa7.54□□□□□ -1.2
SSBP3-212ENST00000528930 ATAD3BQ5T9A4 648 aa7.54□□□□□ -1.2
SSBP3-212ENST00000528930 OR2A2Q6IF42 318 aa7.54□□□□□ -1.2
SSBP3-212ENST00000528930 VWA1Q6PCB0 445 aa7.54□□□□□ -1.2
SSBP3-212ENST00000528930 LRRC74BQ6ZQY2 392 aa7.54□□□□□ -1.2
SSBP3-212ENST00000528930 ASRGL1Q7L266 308 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms