RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 RPL4P36578 427 aaKnown RBP13.5□□□□□ -0.25
ECHDC1-220ENST00000528402 EMP2P54851 167 aa13.5□□□□□ -0.25
ECHDC1-220ENST00000528402 RPS4XP62701 263 aaKnown RBP13.5□□□□□ -0.25
ECHDC1-220ENST00000528402 RNF4P78317 190 aa13.5□□□□□ -0.25
ECHDC1-220ENST00000528402 CBFBQ13951 182 aa13.5□□□□□ -0.25
ECHDC1-220ENST00000528402 C11orf91Q3C1V1 193 aa13.5□□□□□ -0.25
ECHDC1-220ENST00000528402 KLHL12Q53G59 568 aa13.5□□□□□ -0.25
ECHDC1-220ENST00000528402 EMC4Q5J8M3 183 aa13.5□□□□□ -0.25
ECHDC1-220ENST00000528402 C5orf46Q6UWT4 87 aa13.5□□□□□ -0.25
ECHDC1-220ENST00000528402 TMPRSS9Q7Z410 1059 aa13.5□□□□□ -0.25
ECHDC1-220ENST00000528402 MAML2Q8IZL2 1156 aaPredicted RBP13.5□□□□□ -0.25
ECHDC1-220ENST00000528402 OR5M3Q8NGP4 307 aa13.5□□□□□ -0.25
ECHDC1-220ENST00000528402 IFI44Q8TCB0 444 aa13.5□□□□□ -0.25
ECHDC1-220ENST00000528402 TM9SF4Q92544 642 aa13.5□□□□□ -0.25
ECHDC1-220ENST00000528402 C1GALT1C1Q96EU7 318 aa13.5□□□□□ -0.25
ECHDC1-220ENST00000528402 COX4I2Q96KJ9 171 aa13.5□□□□□ -0.25
ECHDC1-220ENST00000528402 CTSFQ9UBX1 484 aa13.5□□□□□ -0.25
ECHDC1-220ENST00000528402 NXT1Q9UKK6 140 aaKnown RBP13.5□□□□□ -0.25
ECHDC1-220ENST00000528402 HIF3AQ9Y2N7 669 aa13.5□□□□□ -0.25
ECHDC1-220ENST00000528402 CCDC182A6NF36 153 aa13.49□□□□□ -0.25
ECHDC1-220ENST00000528402 FAM183AA6NL82 134 aa13.49□□□□□ -0.25
ECHDC1-220ENST00000528402 C12orf71A8MTZ7 269 aa13.49□□□□□ -0.25
ECHDC1-220ENST00000528402 IDSB3KWA1 339 aa13.49□□□□□ -0.25
ECHDC1-220ENST00000528402 ICOSLGO75144 302 aa13.49□□□□□ -0.25
ECHDC1-220ENST00000528402 SULT1C4O75897 302 aa13.49□□□□□ -0.25
ECHDC1-220ENST00000528402 SNX4O95219 450 aa13.49□□□□□ -0.25
ECHDC1-220ENST00000528402 PDGFBP01127 241 aaPredicted RBP13.49□□□□□ -0.25
ECHDC1-220ENST00000528402 MT-ND5P03915 603 aa13.49□□□□□ -0.25
ECHDC1-220ENST00000528402 HIST1H2ABP04908 130 aa13.49□□□□□ -0.25
ECHDC1-220ENST00000528402 SBK2P0C263 348 aa13.49□□□□□ -0.25
ECHDC1-220ENST00000528402 ABCD3P28288 659 aa13.49□□□□□ -0.25
ECHDC1-220ENST00000528402 HTR3AP46098 478 aa13.49□□□□□ -0.25
ECHDC1-220ENST00000528402 P2RX1P51575 399 aa13.49□□□□□ -0.25
ECHDC1-220ENST00000528402 CCR4P51679 360 aa13.49□□□□□ -0.25
ECHDC1-220ENST00000528402 SLC26A5P58743 744 aa13.49□□□□□ -0.25
ECHDC1-220ENST00000528402 RPS7P62081 194 aaKnown RBP13.49□□□□□ -0.25
ECHDC1-220ENST00000528402 CRMP1Q14194 572 aa13.49□□□□□ -0.25
ECHDC1-220ENST00000528402 GGTLC2Q14390 218 aa13.49□□□□□ -0.25
ECHDC1-220ENST00000528402 PON3Q15166 354 aa13.49□□□□□ -0.25
ECHDC1-220ENST00000528402 ZNF74Q16587 644 aa13.49□□□□□ -0.25
ECHDC1-220ENST00000528402 ZNF181Q2M3W8 571 aa13.49□□□□□ -0.25
ECHDC1-220ENST00000528402 NDUFAF6Q330K2 333 aa13.49□□□□□ -0.25
ECHDC1-220ENST00000528402 CRTC2Q53ET0 693 aaPredicted RBP13.49□□□□□ -0.25
ECHDC1-220ENST00000528402 APOOLQ6UXV4 268 aa13.49□□□□□ -0.25
ECHDC1-220ENST00000528402 HIST3H2AQ7L7L0 130 aa13.49□□□□□ -0.25
ECHDC1-220ENST00000528402 PRSS58Q8IYP2 241 aa13.49□□□□□ -0.25
ECHDC1-220ENST00000528402 CACTIN-AS1Q8N1I8 211 aa13.49□□□□□ -0.25
ECHDC1-220ENST00000528402 FAM98AQ8NCA5 519 aaKnown RBP13.49□□□□□ -0.25
ECHDC1-220ENST00000528402 NFAM1Q8NET5 270 aaPredicted RBP13.49□□□□□ -0.25
ECHDC1-220ENST00000528402 SPRYD4Q8WW59 207 aaPredicted RBP13.49□□□□□ -0.25
ECHDC1-220ENST00000528402 AP3S1Q92572 193 aa13.49□□□□□ -0.25
ECHDC1-220ENST00000528402 HIST1H2ACQ93077 130 aa13.49□□□□□ -0.25
ECHDC1-220ENST00000528402 KISS1RQ969F8 398 aaPredicted RBP13.49□□□□□ -0.25
ECHDC1-220ENST00000528402 ARSGQ96EG1 525 aa13.49□□□□□ -0.25
ECHDC1-220ENST00000528402 LMF1Q96S06 567 aa13.49□□□□□ -0.25
ECHDC1-220ENST00000528402 RNF167Q9H6Y7 350 aa13.49□□□□□ -0.25
ECHDC1-220ENST00000528402 TRIM36Q9NQ86 728 aa13.49□□□□□ -0.25
ECHDC1-220ENST00000528402 NANSQ9NR45 359 aa13.49□□□□□ -0.25
ECHDC1-220ENST00000528402 ZNF229Q9UJW7 825 aa13.49□□□□□ -0.25
ECHDC1-220ENST00000528402 POLHQ9Y253 713 aa13.49□□□□□ -0.25
ECHDC1-220ENST00000528402 IER3IP1Q9Y5U9 82 aa13.49□□□□□ -0.25
ECHDC1-220ENST00000528402 FER1L5A0AVI2 2057 aa13.49□□□□□ -0.25
ECHDC1-220ENST00000528402 SDK1Q7Z5N4 2213 aa13.48□□□□□ -0.25
ECHDC1-220ENST00000528402 IGKV1D-42A0A075B6H8 117 aa13.48□□□□□ -0.25
ECHDC1-220ENST00000528402 IQCMA0A1B0GVH7 501 aa13.48□□□□□ -0.25
ECHDC1-220ENST00000528402 NTN3O00634 580 aaPredicted RBP13.48□□□□□ -0.25
ECHDC1-220ENST00000528402 PLD2O14939 933 aa13.48□□□□□ -0.25
ECHDC1-220ENST00000528402 HCRTR2O43614 444 aa13.48□□□□□ -0.25
ECHDC1-220ENST00000528402 FADS1O60427 444 aa13.48□□□□□ -0.25
ECHDC1-220ENST00000528402 APOL3O95236 402 aa13.48□□□□□ -0.25
ECHDC1-220ENST00000528402 TXNDC12O95881 172 aa13.48□□□□□ -0.25
ECHDC1-220ENST00000528402 OR2T7P0C7T2 308 aa13.48□□□□□ -0.25
ECHDC1-220ENST00000528402 GP1BBP13224 206 aa13.48□□□□□ -0.25
ECHDC1-220ENST00000528402 PTNP21246 168 aa13.48□□□□□ -0.25
ECHDC1-220ENST00000528402 CXCR1P25024 350 aa13.48□□□□□ -0.25
ECHDC1-220ENST00000528402 RPS19P39019 145 aaKnown RBP13.48□□□□□ -0.25
ECHDC1-220ENST00000528402 EFNA3P52797 238 aa13.48□□□□□ -0.25
ECHDC1-220ENST00000528402 KRR1Q13601 381 aaKnown RBP13.48□□□□□ -0.25
ECHDC1-220ENST00000528402 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.48□□□□□ -0.257e-7■□□□□ 8.4
ECHDC1-220ENST00000528402 SOWAHCQ53LP3 525 aaPredicted RBP13.48□□□□□ -0.25
ECHDC1-220ENST00000528402 SPANXN2Q5MJ10 180 aa13.48□□□□□ -0.25
ECHDC1-220ENST00000528402 ZNF385CQ66K41 422 aaPredicted RBP13.48□□□□□ -0.25
ECHDC1-220ENST00000528402 PWWP2BQ6NUJ5 590 aa13.48□□□□□ -0.25
ECHDC1-220ENST00000528402 CBLN3Q6UW01 205 aa13.48□□□□□ -0.25
ECHDC1-220ENST00000528402 ZBTB46Q86UZ6 589 aa13.48□□□□□ -0.25
ECHDC1-220ENST00000528402 SIRT6Q8N6T7 355 aa13.48□□□□□ -0.25
ECHDC1-220ENST00000528402 ATP6V1C2Q8NEY4 427 aa13.48□□□□□ -0.25
ECHDC1-220ENST00000528402 OR52E2Q8NGJ4 325 aa13.48□□□□□ -0.25
ECHDC1-220ENST00000528402 OR2T27Q8NH04 317 aa13.48□□□□□ -0.25
ECHDC1-220ENST00000528402 TTC9Q92623 222 aa13.48□□□□□ -0.25
ECHDC1-220ENST00000528402 TMCO6Q96DC7 493 aa13.48□□□□□ -0.25
ECHDC1-220ENST00000528402 CEP19Q96LK0 163 aa13.48□□□□□ -0.25
ECHDC1-220ENST00000528402 LPAR4Q99677 370 aa13.48□□□□□ -0.25
ECHDC1-220ENST00000528402 ALG8Q9BVK2 526 aa13.48□□□□□ -0.25
ECHDC1-220ENST00000528402 OR51V1Q9H2C8 321 aa13.48□□□□□ -0.25
ECHDC1-220ENST00000528402 FKRPQ9H9S5 495 aa13.48□□□□□ -0.25
ECHDC1-220ENST00000528402 FAIMQ9NVQ4 179 aa13.48□□□□□ -0.25
ECHDC1-220ENST00000528402 MOKQ9UQ07 419 aa13.48□□□□□ -0.25
ECHDC1-220ENST00000528402 NPFFR2Q9Y5X5 522 aa13.48□□□□□ -0.25
ECHDC1-220ENST00000528402 MT-ATP6P00846 226 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms