RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 PRAMEF27A3QJZ7 478 aa9.3□□□□□ -0.92
CPSF1-203ENST00000527916 ZNF724A8MTY0 619 aa9.3□□□□□ -0.92
CPSF1-203ENST00000527916 HMGN4O00479 90 aa9.3□□□□□ -0.92
CPSF1-203ENST00000527916 CYTIPO60759 359 aa9.3□□□□□ -0.92
CPSF1-203ENST00000527916 UBTFL6P0CB48 400 aaPredicted RBP9.3□□□□□ -0.92
CPSF1-203ENST00000527916 ZCCHC18P0CG32 403 aa9.3□□□□□ -0.92
CPSF1-203ENST00000527916 IGHV4-31P0DP07 118 aa9.3□□□□□ -0.92
CPSF1-203ENST00000527916 IDO1P14902 403 aa9.3□□□□□ -0.92
CPSF1-203ENST00000527916 ENPP1P22413 925 aa9.3□□□□□ -0.92
CPSF1-203ENST00000527916 USF1P22415 310 aaPredicted RBP9.3□□□□□ -0.92
CPSF1-203ENST00000527916 EPHA3P29320 983 aa9.3□□□□□ -0.92
CPSF1-203ENST00000527916 SLC7A1P30825 629 aa9.3□□□□□ -0.92
CPSF1-203ENST00000527916 CLK1P49759 484 aaKnown RBP9.3□□□□□ -0.92
CPSF1-203ENST00000527916 CCR4P51679 360 aa9.3□□□□□ -0.92
CPSF1-203ENST00000527916 MAP2K6P52564 334 aa9.3□□□□□ -0.92
CPSF1-203ENST00000527916 KCNJ10P78508 379 aa9.3□□□□□ -0.92
CPSF1-203ENST00000527916 BSPH1Q075Z2 132 aa9.3□□□□□ -0.92
CPSF1-203ENST00000527916 P2RY6Q15077 328 aa9.3□□□□□ -0.92
CPSF1-203ENST00000527916 PDK3Q15120 406 aa9.3□□□□□ -0.92
CPSF1-203ENST00000527916 RAB35Q15286 201 aa9.3□□□□□ -0.92
CPSF1-203ENST00000527916 TAB1Q15750 504 aa9.3□□□□□ -0.92
CPSF1-203ENST00000527916 GSTA3Q16772 222 aa9.3□□□□□ -0.92
CPSF1-203ENST00000527916 PDCD4Q53EL6 469 aaKnown RBP9.3□□□□□ -0.92
CPSF1-203ENST00000527916 GPAT3Q53EU6 434 aa9.3□□□□□ -0.92
CPSF1-203ENST00000527916 FAM120AOSQ5T036 256 aa9.3□□□□□ -0.92
CPSF1-203ENST00000527916 LRRC74BQ6ZQY2 392 aa9.3□□□□□ -0.92
CPSF1-203ENST00000527916 TMPPEQ6ZT21 453 aa9.3□□□□□ -0.92
CPSF1-203ENST00000527916 GABRG1Q8N1C3 465 aa9.3□□□□□ -0.92
CPSF1-203ENST00000527916 ARIH2OSQ8N7S6 290 aa9.3□□□□□ -0.92
CPSF1-203ENST00000527916 PIWIL2Q8TC59 973 aaKnown RBP9.3□□□□□ -0.92
CPSF1-203ENST00000527916 FAM168AQ92567 244 aa9.3□□□□□ -0.92
CPSF1-203ENST00000527916 PROX1Q92786 737 aa9.3□□□□□ -0.92
CPSF1-203ENST00000527916 ZG16BQ96DA0 208 aa9.3□□□□□ -0.92
CPSF1-203ENST00000527916 ZBTB18Q99592 522 aa9.3□□□□□ -0.92
CPSF1-203ENST00000527916 PSD2Q9BQI7 771 aa9.3□□□□□ -0.92
CPSF1-203ENST00000527916 WDR55Q9H6Y2 383 aaPredicted RBP9.3□□□□□ -0.92
CPSF1-203ENST00000527916 MTHFD2LQ9H903 347 aaPredicted RBP9.3□□□□□ -0.92
CPSF1-203ENST00000527916 CHODLQ9H9P2 273 aa9.3□□□□□ -0.92
CPSF1-203ENST00000527916 ING1Q9UK53 422 aaPredicted RBP9.3□□□□□ -0.92
CPSF1-203ENST00000527916 B3GALT5Q9Y2C3 310 aa9.3□□□□□ -0.92
CPSF1-203ENST00000527916 PKD1L1Q8TDX9 2849 aa9.29□□□□□ -0.92
CPSF1-203ENST00000527916 AGAP5A6NIR3 686 aa9.29□□□□□ -0.92
CPSF1-203ENST00000527916 FAAHO00519 579 aa9.29□□□□□ -0.92
CPSF1-203ENST00000527916 DNPH1O43598 174 aa9.29□□□□□ -0.92
CPSF1-203ENST00000527916 TCF21O43680 179 aa9.29□□□□□ -0.92
CPSF1-203ENST00000527916 GCM2O75603 506 aaPredicted RBP9.29□□□□□ -0.92
CPSF1-203ENST00000527916 SLC22A3O75751 556 aa9.29□□□□□ -0.92
CPSF1-203ENST00000527916 CYP7B1O75881 506 aa9.29□□□□□ -0.92
CPSF1-203ENST00000527916 H6PDO95479 791 aa9.29□□□□□ -0.92
CPSF1-203ENST00000527916 KRT75O95678 551 aa9.29□□□□□ -0.92
CPSF1-203ENST00000527916 CSF3P09919 207 aa9.29□□□□□ -0.92
CPSF1-203ENST00000527916 IGFBP5P24593 272 aa9.29□□□□□ -0.92
CPSF1-203ENST00000527916 CDKN2CP42773 168 aa9.29□□□□□ -0.92
CPSF1-203ENST00000527916 RNF144AP50876 292 aaPredicted RBP9.29□□□□□ -0.92
CPSF1-203ENST00000527916 CDH11P55287 796 aa9.29□□□□□ -0.92
CPSF1-203ENST00000527916 CSNK2A1P68400 391 aaPredicted RBP9.29□□□□□ -0.92
CPSF1-203ENST00000527916 LSM11P83369 360 aaKnown RBP eCLIP9.29□□□□□ -0.92
CPSF1-203ENST00000527916 HPCAP84074 193 aa9.29□□□□□ -0.92
CPSF1-203ENST00000527916 CHRNEQ04844 493 aa9.29□□□□□ -0.92
CPSF1-203ENST00000527916 RASGEF1BQ0VAM2 473 aa9.29□□□□□ -0.92
CPSF1-203ENST00000527916 MERTKQ12866 999 aa9.29□□□□□ -0.92
CPSF1-203ENST00000527916 SFRP5Q5T4F7 317 aa9.29□□□□□ -0.92
CPSF1-203ENST00000527916 TFAP2EQ6VUC0 442 aa9.29□□□□□ -0.92
CPSF1-203ENST00000527916 ZNF621Q6ZSS3 439 aa9.29□□□□□ -0.92
CPSF1-203ENST00000527916 MSANTD1Q6ZTZ1 278 aa9.29□□□□□ -0.92
CPSF1-203ENST00000527916 OLIG3Q7RTU3 272 aa9.29□□□□□ -0.92
CPSF1-203ENST00000527916 NUFIP2Q7Z417 695 aaKnown RBP9.29□□□□□ -0.92
CPSF1-203ENST00000527916 GRINAQ7Z429 371 aa9.29□□□□□ -0.92
CPSF1-203ENST00000527916 MTDHQ86UE4 582 aaKnown RBP9.29□□□□□ -0.92
CPSF1-203ENST00000527916 MEX3DQ86XN8 651 aaKnown RBP9.29□□□□□ -0.92
CPSF1-203ENST00000527916 RNF130Q86XS8 419 aa9.29□□□□□ -0.92
CPSF1-203ENST00000527916 RFLNBQ8N5W9 214 aa9.29□□□□□ -0.92
CPSF1-203ENST00000527916 ARFGAP2Q8N6H7 521 aa9.29□□□□□ -0.92
CPSF1-203ENST00000527916 ATP6V1C2Q8NEY4 427 aa9.29□□□□□ -0.92
CPSF1-203ENST00000527916 MGARPQ8TDB4 240 aa9.29□□□□□ -0.92
CPSF1-203ENST00000527916 ZNF75CPQ92670 426 aaPredicted RBP9.29□□□□□ -0.92
CPSF1-203ENST00000527916 KISS1RQ969F8 398 aaPredicted RBP9.29□□□□□ -0.92
CPSF1-203ENST00000527916 RADILQ96JH8 1075 aa9.29□□□□□ -0.92
CPSF1-203ENST00000527916 OR5B2Q96R09 309 aa9.29□□□□□ -0.92
CPSF1-203ENST00000527916 INPP5KQ9BT40 448 aa9.29□□□□□ -0.92
CPSF1-203ENST00000527916 CCDC106Q9BWC9 280 aa9.29□□□□□ -0.92
CPSF1-203ENST00000527916 CACNG6Q9BXT2 260 aa9.29□□□□□ -0.92
CPSF1-203ENST00000527916 QRSL1Q9H0R6 528 aaKnown RBP9.29□□□□□ -0.92
CPSF1-203ENST00000527916 SLC38A1Q9H2H9 487 aa9.29□□□□□ -0.92
CPSF1-203ENST00000527916 C12orf49Q9H741 205 aa9.29□□□□□ -0.92
CPSF1-203ENST00000527916 SDR39U1Q9NRG7 319 aaPredicted RBP9.29□□□□□ -0.92
CPSF1-203ENST00000527916 ZIM2Q9NZV7 527 aa9.29□□□□□ -0.92
CPSF1-203ENST00000527916 HDGFL3Q9Y3E1 203 aa9.29□□□□□ -0.92
CPSF1-203ENST00000527916 SPIN1Q9Y657 262 aaPredicted RBP9.29□□□□□ -0.92
CPSF1-203ENST00000527916 IGKV3D-15A0A087WSY6 115 aa9.28□□□□□ -0.92
CPSF1-203ENST00000527916 GOLGA8QA0A0J9YX86 632 aa9.28□□□□□ -0.92
CPSF1-203ENST00000527916 LOC100289279A0A1B0GTE1 492 aa9.28□□□□□ -0.92
CPSF1-203ENST00000527916 A0A1W2PNR3 127 aa9.28□□□□□ -0.92
CPSF1-203ENST00000527916 GOLGA8OA6NCC3 632 aa9.28□□□□□ -0.92
CPSF1-203ENST00000527916 DPRXA6NFQ7 191 aa9.28□□□□□ -0.92
CPSF1-203ENST00000527916 ZNF814B7Z6K7 855 aa9.28□□□□□ -0.92
CPSF1-203ENST00000527916 GOLGA8NF8WBI6 632 aa9.28□□□□□ -0.92
CPSF1-203ENST00000527916 SULT2B1O00204 365 aa9.28□□□□□ -0.92
CPSF1-203ENST00000527916 RFXANKO14593 260 aa9.28□□□□□ -0.92
CPSF1-203ENST00000527916 SMAD9O15198 467 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms