RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 FKBP2P26885 142 aaKnown RBP13.78□□□□□ -0.2
CAPN1-213ENST00000527897 OR3A2P47893 321 aa13.78□□□□□ -0.2
CAPN1-213ENST00000527897 CLK1P49759 484 aaKnown RBP13.78□□□□□ -0.2
CAPN1-213ENST00000527897 HOXC5Q00444 222 aa13.78□□□□□ -0.2
CAPN1-213ENST00000527897 BNIP2Q12982 314 aa13.78□□□□□ -0.2
CAPN1-213ENST00000527897 STK11Q15831 433 aa13.78□□□□□ -0.2
CAPN1-213ENST00000527897 DEFB113Q30KQ7 82 aa13.78□□□□□ -0.2
CAPN1-213ENST00000527897 BEX5Q5H9J7 111 aa13.78□□□□□ -0.2
CAPN1-213ENST00000527897 LRIF1Q5T3J3 769 aa13.78□□□□□ -0.2
CAPN1-213ENST00000527897 SFRP5Q5T4F7 317 aa13.78□□□□□ -0.2
CAPN1-213ENST00000527897 ABLIM2Q6H8Q1 611 aa13.78□□□□□ -0.2
CAPN1-213ENST00000527897 SERPINA11Q86U17 422 aa13.78□□□□□ -0.2
CAPN1-213ENST00000527897 GABRG1Q8N1C3 465 aa13.78□□□□□ -0.2
CAPN1-213ENST00000527897 UBE2J2Q8N2K1 259 aa13.78□□□□□ -0.2
CAPN1-213ENST00000527897 BBS10Q8TAM1 723 aa13.78□□□□□ -0.2
CAPN1-213ENST00000527897 PIGXQ8TBF5 258 aa13.78□□□□□ -0.2
CAPN1-213ENST00000527897 PLPPR2Q96GM1 343 aa13.78□□□□□ -0.2
CAPN1-213ENST00000527897 SPATA9Q9BWV2 254 aa13.78□□□□□ -0.2
CAPN1-213ENST00000527897 NOSIPQ9Y314 301 aaKnown RBP13.78□□□□□ -0.2
CAPN1-213ENST00000527897 ZNF724A8MTY0 619 aa13.77□□□□□ -0.21
CAPN1-213ENST00000527897 EVPLLA8MZ36 301 aa13.77□□□□□ -0.21
CAPN1-213ENST00000527897 FAAHO00519 579 aa13.77□□□□□ -0.21
CAPN1-213ENST00000527897 ZNF208O43345 1280 aa13.77□□□□□ -0.21
CAPN1-213ENST00000527897 RAMP1O60894 148 aa13.77□□□□□ -0.21
CAPN1-213ENST00000527897 PGM3O95394 542 aa13.77□□□□□ -0.21
CAPN1-213ENST00000527897 ARAFP10398 606 aa13.77□□□□□ -0.21
CAPN1-213ENST00000527897 IMPDH2P12268 514 aa13.77□□□□□ -0.21
CAPN1-213ENST00000527897 CD53P19397 219 aa13.77□□□□□ -0.21
CAPN1-213ENST00000527897 PPIBP23284 216 aaKnown RBP13.77□□□□□ -0.21
CAPN1-213ENST00000527897 ACAA2P42765 397 aaKnown RBP13.77□□□□□ -0.21
CAPN1-213ENST00000527897 SLC35A1P78382 337 aa13.77□□□□□ -0.21
CAPN1-213ENST00000527897 ITGADQ13349 1161 aa13.77□□□□□ -0.21
CAPN1-213ENST00000527897 RNF220Q5VTB9 566 aa13.77□□□□□ -0.21
CAPN1-213ENST00000527897 WBP2NLQ6ICG8 309 aa13.77□□□□□ -0.21
CAPN1-213ENST00000527897 BHLHA15Q7RTS1 189 aaPredicted RBP13.77□□□□□ -0.21
CAPN1-213ENST00000527897 C10orf111Q8N326 155 aa13.77□□□□□ -0.21
CAPN1-213ENST00000527897 ALPK1Q96QP1 1244 aa13.77□□□□□ -0.21
CAPN1-213ENST00000527897 NAA11Q9BSU3 229 aaPredicted RBP13.77□□□□□ -0.21
CAPN1-213ENST00000527897 HDHD5Q9BXW7 423 aa13.77□□□□□ -0.21
CAPN1-213ENST00000527897 SLC52A3Q9NQ40 469 aa13.77□□□□□ -0.21
CAPN1-213ENST00000527897 LEF1Q9UJU2 399 aaPredicted RBP13.77□□□□□ -0.21
CAPN1-213ENST00000527897 A0A1W2PP18 115 aa13.76□□□□□ -0.21
CAPN1-213ENST00000527897 ZNF716A6NP11 495 aa13.76□□□□□ -0.21
CAPN1-213ENST00000527897 ANGPT2O15123 496 aa13.76□□□□□ -0.21
CAPN1-213ENST00000527897 KLF4O43474 513 aa13.76□□□□□ -0.21
CAPN1-213ENST00000527897 BMP2P12643 396 aa13.76□□□□□ -0.21
CAPN1-213ENST00000527897 AQP1P29972 269 aa13.76□□□□□ -0.21
CAPN1-213ENST00000527897 ADSLP30566 484 aaPredicted RBP13.76□□□□□ -0.21
CAPN1-213ENST00000527897 IDUAP35475 653 aa13.76□□□□□ -0.21
CAPN1-213ENST00000527897 IRX1P78414 480 aaPredicted RBP13.76□□□□□ -0.21
CAPN1-213ENST00000527897 CDK6Q00534 326 aa13.76□□□□□ -0.21
CAPN1-213ENST00000527897 CEACAM7Q14002 265 aa13.76□□□□□ -0.21
CAPN1-213ENST00000527897 P2RY6Q15077 328 aa13.76□□□□□ -0.21
CAPN1-213ENST00000527897 OR7A5Q15622 319 aa13.76□□□□□ -0.21
CAPN1-213ENST00000527897 ZSWIM7Q19AV6 140 aa13.76□□□□□ -0.21
CAPN1-213ENST00000527897 REEP3Q6NUK4 255 aa13.76□□□□□ -0.21
CAPN1-213ENST00000527897 CASP12Q6UXS9 341 aa13.76□□□□□ -0.21
CAPN1-213ENST00000527897 Q6ZT83 130 aa13.76□□□□□ -0.21
CAPN1-213ENST00000527897 KRT73Q86Y46 540 aa13.76□□□□□ -0.21
CAPN1-213ENST00000527897 MBD6Q96DN6 1003 aa13.76□□□□□ -0.21
CAPN1-213ENST00000527897 ADAM19Q9H013 955 aa13.76□□□□□ -0.21
CAPN1-213ENST00000527897 CXXC4Q9H2H0 198 aa13.76□□□□□ -0.21
CAPN1-213ENST00000527897 IKZF5Q9H5V7 419 aa13.76□□□□□ -0.21
CAPN1-213ENST00000527897 BCL2L10Q9HD36 194 aa13.76□□□□□ -0.21
CAPN1-213ENST00000527897 RPS6KB2Q9UBS0 482 aa13.76□□□□□ -0.21
CAPN1-213ENST00000527897 TRAPPC4Q9Y296 219 aa13.76□□□□□ -0.21
CAPN1-213ENST00000527897 NDUFAF1Q9Y375 327 aa13.76□□□□□ -0.21
CAPN1-213ENST00000527897 CHST2Q9Y4C5 530 aa13.76□□□□□ -0.21
CAPN1-213ENST00000527897 GPR171O14626 319 aa13.75□□□□□ -0.21
CAPN1-213ENST00000527897 DNPH1O43598 174 aa13.75□□□□□ -0.21
CAPN1-213ENST00000527897 EIF1BO60739 113 aaKnown RBP13.75□□□□□ -0.21
CAPN1-213ENST00000527897 MRPL33O75394 65 aaKnown RBP13.75□□□□□ -0.21
CAPN1-213ENST00000527897 AKR7A3O95154 331 aa13.75□□□□□ -0.21
CAPN1-213ENST00000527897 PLAUP00749 431 aa13.75□□□□□ -0.21
CAPN1-213ENST00000527897 GPIP06744 558 aa13.75□□□□□ -0.21
CAPN1-213ENST00000527897 CD99P14209 185 aa13.75□□□□□ -0.21
CAPN1-213ENST00000527897 SLC6A2P23975 617 aa13.75□□□□□ -0.21
CAPN1-213ENST00000527897 NR1H2P55055 460 aa13.75□□□□□ -0.21
CAPN1-213ENST00000527897 SCARB2Q14108 478 aa13.75□□□□□ -0.21
CAPN1-213ENST00000527897 TAB1Q15750 504 aa13.75□□□□□ -0.21
CAPN1-213ENST00000527897 ACKR1Q16570 336 aa13.75□□□□□ -0.21
CAPN1-213ENST00000527897 OTUD3Q5T2D3 398 aaPredicted RBP13.75□□□□□ -0.21
CAPN1-213ENST00000527897 PRAMEF8Q5VWM4 474 aa13.75□□□□□ -0.21
CAPN1-213ENST00000527897 PRAMEF7Q5VXH5 474 aa13.75□□□□□ -0.21
CAPN1-213ENST00000527897 ZNF704Q6ZNC4 412 aaPredicted RBP13.75□□□□□ -0.21
CAPN1-213ENST00000527897 DHDDSQ86SQ9 333 aa13.75□□□□□ -0.21
CAPN1-213ENST00000527897 TGIF2LYQ8IUE0 185 aa13.75□□□□□ -0.21
CAPN1-213ENST00000527897 RNF217Q8TC41 542 aa13.75□□□□□ -0.21
CAPN1-213ENST00000527897 APH1AQ96BI3 265 aa13.75□□□□□ -0.21
CAPN1-213ENST00000527897 CCL19Q99731 98 aa13.75□□□□□ -0.21
CAPN1-213ENST00000527897 CPPED1Q9BRF8 314 aaPredicted RBP13.75□□□□□ -0.21
CAPN1-213ENST00000527897 TAPBPLQ9BX59 468 aa13.75□□□□□ -0.21
CAPN1-213ENST00000527897 TMEM120AQ9BXJ8 343 aa13.75□□□□□ -0.21
CAPN1-213ENST00000527897 OR10A4Q9H209 315 aa13.75□□□□□ -0.21
CAPN1-213ENST00000527897 TMEM45AQ9NWC5 275 aa13.75□□□□□ -0.21
CAPN1-213ENST00000527897 ADPRHL2Q9NX46 363 aa13.75□□□□□ -0.21
CAPN1-213ENST00000527897 CORO2BQ9UQ03 480 aa13.75□□□□□ -0.21
CAPN1-213ENST00000527897 VPS13CQ709C8 3753 aa13.75□□□□□ -0.21
CAPN1-213ENST00000527897 DSCAMO60469 2012 aa13.74□□□□□ -0.21
CAPN1-213ENST00000527897 IGKV3D-15A0A087WSY6 115 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 235.6 ms