RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 ZNF550Q7Z398 422 aa17.11■□□□□ 0.33
SMPD1-203ENST00000527275 BCDIN3DQ7Z5W3 292 aaKnown RBP17.11■□□□□ 0.33
SMPD1-203ENST00000527275 CMIPQ8IY22 773 aa17.11■□□□□ 0.33
SMPD1-203ENST00000527275 OIT3Q8WWZ8 545 aa17.11■□□□□ 0.33
SMPD1-203ENST00000527275 SLC35B4Q969S0 331 aa17.11■□□□□ 0.33
SMPD1-203ENST00000527275 DCBLD2Q96PD2 775 aa17.11■□□□□ 0.33
SMPD1-203ENST00000527275 TSSK6Q9BXA6 273 aa17.11■□□□□ 0.33
SMPD1-203ENST00000527275 TRIM2Q9C040 744 aa17.11■□□□□ 0.33
SMPD1-203ENST00000527275 IL20Q9NYY1 176 aa17.11■□□□□ 0.33
SMPD1-203ENST00000527275 A0A0B4J2E0 115 aa17.11■□□□□ 0.33
SMPD1-203ENST00000527275 A0A1B0GX12 115 aa17.11■□□□□ 0.33
SMPD1-203ENST00000527275 A0A1W2PPW3 197 aa17.11■□□□□ 0.33
SMPD1-203ENST00000527275 CDC42EP2O14613 210 aa17.11■□□□□ 0.33
SMPD1-203ENST00000527275 SOX8P57073 446 aa17.11■□□□□ 0.33
SMPD1-203ENST00000527275 SLC25A30Q5SVS4 291 aa17.11■□□□□ 0.33
SMPD1-203ENST00000527275 ABHD17BQ5VST6 288 aa17.11■□□□□ 0.33
SMPD1-203ENST00000527275 YIPF6Q96EC8 236 aa17.11■□□□□ 0.33
SMPD1-203ENST00000527275 HPF1Q9NWY4 346 aa17.11■□□□□ 0.33
SMPD1-203ENST00000527275 ENPP5Q9UJA9 477 aa17.11■□□□□ 0.33
SMPD1-203ENST00000527275 RPL36Q9Y3U8 105 aaKnown RBP17.11■□□□□ 0.33
SMPD1-203ENST00000527275 CHCHD2Q9Y6H1 151 aaPredicted RBP17.11■□□□□ 0.33
SMPD1-203ENST00000527275 ANKRD11Q6UB99 2663 aaPredicted RBP17.1■□□□□ 0.33
SMPD1-203ENST00000527275 EML6Q6ZMW3 1958 aa17.1■□□□□ 0.33
SMPD1-203ENST00000527275 A0A1B0GWA3 101 aa17.1■□□□□ 0.33
SMPD1-203ENST00000527275 NDUFB5O43674 189 aa17.1■□□□□ 0.33
SMPD1-203ENST00000527275 SCO2O43819 266 aa17.1■□□□□ 0.33
SMPD1-203ENST00000527275 F10P00742 488 aa17.1■□□□□ 0.33
SMPD1-203ENST00000527275 PIPP12273 146 aaPredicted RBP17.1■□□□□ 0.33
SMPD1-203ENST00000527275 ADH7P40394 386 aa17.1■□□□□ 0.33
SMPD1-203ENST00000527275 ROR2Q01974 943 aaKnown RBP17.1■□□□□ 0.33
SMPD1-203ENST00000527275 CLEC12AQ5QGZ9 265 aa17.1■□□□□ 0.33
SMPD1-203ENST00000527275 MEDAGQ5VYS4 303 aa17.1■□□□□ 0.33
SMPD1-203ENST00000527275 CBLN3Q6UW01 205 aa17.1■□□□□ 0.33
SMPD1-203ENST00000527275 SLC16A12Q6ZSM3 486 aa17.1■□□□□ 0.33
SMPD1-203ENST00000527275 LSMEM1Q8N8F7 131 aa17.1■□□□□ 0.33
SMPD1-203ENST00000527275 PFN4Q8NHR9 129 aa17.1■□□□□ 0.33
SMPD1-203ENST00000527275 GALNT9Q9HCQ5 603 aa17.1■□□□□ 0.33
SMPD1-203ENST00000527275 TBC1D23Q9NUY8 699 aa17.1■□□□□ 0.33
SMPD1-203ENST00000527275 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.1■□□□□ 0.33
SMPD1-203ENST00000527275 SLC35A3Q9Y2D2 325 aa17.1■□□□□ 0.33
SMPD1-203ENST00000527275 A0A1W2PQD3 144 aa17.09■□□□□ 0.33
SMPD1-203ENST00000527275 ADAM10O14672 748 aa17.09■□□□□ 0.33
SMPD1-203ENST00000527275 CHP2O43745 196 aa17.09■□□□□ 0.33
SMPD1-203ENST00000527275 IFI30P13284 250 aa17.09■□□□□ 0.33
SMPD1-203ENST00000527275 NR4A1P22736 598 aa17.09■□□□□ 0.33
SMPD1-203ENST00000527275 CCL11P51671 97 aa17.09■□□□□ 0.33
SMPD1-203ENST00000527275 PRKCDQ05655 676 aa17.09■□□□□ 0.33
SMPD1-203ENST00000527275 IRF3Q14653 427 aa17.09■□□□□ 0.33
SMPD1-203ENST00000527275 ZNF620Q6ZNG0 422 aa17.09■□□□□ 0.33
SMPD1-203ENST00000527275 LINC00696Q6ZRV3 163 aa17.09■□□□□ 0.33
SMPD1-203ENST00000527275 LSRQ86X29 649 aaPredicted RBP17.09■□□□□ 0.33
SMPD1-203ENST00000527275 LRR1Q96L50 414 aa17.09■□□□□ 0.33
SMPD1-203ENST00000527275 HS6ST2Q96MM7 605 aa17.09■□□□□ 0.33
SMPD1-203ENST00000527275 SLC38A2Q96QD8 506 aa17.09■□□□□ 0.33
SMPD1-203ENST00000527275 CARD8Q9Y2G2 431 aa17.09■□□□□ 0.33
SMPD1-203ENST00000527275 MED31Q9Y3C7 131 aa17.09■□□□□ 0.33
SMPD1-203ENST00000527275 C2orf72A6NCS6 295 aa17.09■□□□□ 0.33
SMPD1-203ENST00000527275 UNC119BA6NIH7 251 aa17.09■□□□□ 0.33
SMPD1-203ENST00000527275 TP53I11O14683 189 aa17.09■□□□□ 0.33
SMPD1-203ENST00000527275 UBL4AP11441 157 aa17.09■□□□□ 0.33
SMPD1-203ENST00000527275 MDGA2Q7Z553 956 aa17.09■□□□□ 0.33
SMPD1-203ENST00000527275 CDK20Q8IZL9 346 aa17.09■□□□□ 0.33
SMPD1-203ENST00000527275 CLDN22Q8N7P3 220 aa17.09■□□□□ 0.33
SMPD1-203ENST00000527275 FAM71CQ8NEG0 241 aa17.09■□□□□ 0.33
SMPD1-203ENST00000527275 C9orf43Q8TAL5 461 aaPredicted RBP17.09■□□□□ 0.33
SMPD1-203ENST00000527275 CRELD1Q96HD1 420 aa17.09■□□□□ 0.33
SMPD1-203ENST00000527275 CDCA4Q9BXL8 241 aa17.09■□□□□ 0.33
SMPD1-203ENST00000527275 PRRG3Q9BZD7 231 aa17.09■□□□□ 0.33
SMPD1-203ENST00000527275 C20orf141Q9NUB4 165 aa17.09■□□□□ 0.33
SMPD1-203ENST00000527275 KLRF1Q9NZS2 232 aa17.09■□□□□ 0.33
SMPD1-203ENST00000527275 KCNMB2Q9Y691 235 aa17.09■□□□□ 0.33
SMPD1-203ENST00000527275 CDH10Q9Y6N8 788 aa17.09■□□□□ 0.33
SMPD1-203ENST00000527275 GTPBP1O00178 669 aaKnown RBP17.08■□□□□ 0.33
SMPD1-203ENST00000527275 KPNA4O00629 521 aaPredicted RBP17.08■□□□□ 0.33
SMPD1-203ENST00000527275 RRP8O43159 456 aaKnown RBP17.08■□□□□ 0.33
SMPD1-203ENST00000527275 ZNF264O43296 627 aa17.08■□□□□ 0.33
SMPD1-203ENST00000527275 OIP5O43482 229 aa17.08■□□□□ 0.33
SMPD1-203ENST00000527275 MAKP20794 623 aa17.08■□□□□ 0.33
SMPD1-203ENST00000527275 CASP3P42574 277 aa17.08■□□□□ 0.33
SMPD1-203ENST00000527275 CYB561P49447 251 aa17.08■□□□□ 0.33
SMPD1-203ENST00000527275 OC90Q02509 493 aaPredicted RBP17.08■□□□□ 0.33
SMPD1-203ENST00000527275 NFATC3Q12968 1075 aa17.08■□□□□ 0.33
SMPD1-203ENST00000527275 SYT14P1Q58G82 188 aa17.08■□□□□ 0.33
SMPD1-203ENST00000527275 AGAP7PQ5VUJ5 663 aa17.08■□□□□ 0.33
SMPD1-203ENST00000527275 DND1Q8IYX4 353 aaKnown RBP17.08■□□□□ 0.33
SMPD1-203ENST00000527275 CYP4Z2PQ8N1L4 340 aa17.08■□□□□ 0.33
SMPD1-203ENST00000527275 TMEM163Q8TC26 289 aa17.08■□□□□ 0.33
SMPD1-203ENST00000527275 DUSP19Q8WTR2 217 aa17.08■□□□□ 0.33
SMPD1-203ENST00000527275 RNF138Q8WVD3 245 aa17.08■□□□□ 0.33
SMPD1-203ENST00000527275 AGAP4Q96P64 663 aa17.08■□□□□ 0.33
SMPD1-203ENST00000527275 TEX12Q9BXU0 123 aa17.08■□□□□ 0.33
SMPD1-203ENST00000527275 METTL7AQ9H8H3 244 aa17.08■□□□□ 0.33
SMPD1-203ENST00000527275 HCRTR2O43614 444 aa17.08■□□□□ 0.32
SMPD1-203ENST00000527275 ADRA2AP08913 450 aa17.08■□□□□ 0.32
SMPD1-203ENST00000527275 CCL3P10147 92 aa17.08■□□□□ 0.32
SMPD1-203ENST00000527275 TLE3Q04726 772 aa17.08■□□□□ 0.32
SMPD1-203ENST00000527275 SKP2Q13309 424 aa17.08■□□□□ 0.32
SMPD1-203ENST00000527275 CTF1Q16619 201 aa17.08■□□□□ 0.32
SMPD1-203ENST00000527275 ALG10BQ5I7T1 473 aa17.08■□□□□ 0.32
SMPD1-203ENST00000527275 PRAMEF20Q5VT98 475 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms