RNA–Protein interactions for RNA: ENST00000526734.5

VPS28-206, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 570 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-206ENST00000526734 GPX2P18283 190 aa18.31■□□□□ 0.52
VPS28-206ENST00000526734 IL32P24001 234 aa18.31■□□□□ 0.52
VPS28-206ENST00000526734 CXCR1P25024 350 aa18.31■□□□□ 0.52
VPS28-206ENST00000526734 PRKAR1BP31321 381 aa18.31■□□□□ 0.52
VPS28-206ENST00000526734 ACAA2P42765 397 aaKnown RBP18.31■□□□□ 0.52
VPS28-206ENST00000526734 SLC16A1P53985 500 aa18.31■□□□□ 0.52
VPS28-206ENST00000526734 REEP3Q6NUK4 255 aa18.31■□□□□ 0.52
VPS28-206ENST00000526734 PIK3IP1Q96FE7 263 aa18.31■□□□□ 0.52
VPS28-206ENST00000526734 NAA11Q9BSU3 229 aaPredicted RBP18.31■□□□□ 0.52
VPS28-206ENST00000526734 OR11A1Q9GZK7 315 aa18.31■□□□□ 0.52
VPS28-206ENST00000526734 VAPAQ9P0L0 249 aa18.31■□□□□ 0.52
VPS28-206ENST00000526734 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.31■□□□□ 0.52
VPS28-206ENST00000526734 NDUFAF1Q9Y375 327 aa18.31■□□□□ 0.52
VPS28-206ENST00000526734 ABCA4P78363 2273 aa18.3■□□□□ 0.52
VPS28-206ENST00000526734 A0A0G2JND7 137 aa18.3■□□□□ 0.52
VPS28-206ENST00000526734 TMEM72A0PK05 275 aa18.3■□□□□ 0.52
VPS28-206ENST00000526734 ANGPT2O15123 496 aa18.3■□□□□ 0.52
VPS28-206ENST00000526734 OR2B6P58173 313 aa18.3■□□□□ 0.52
VPS28-206ENST00000526734 CDK6Q00534 326 aa18.3■□□□□ 0.52
VPS28-206ENST00000526734 ITGADQ13349 1161 aa18.3■□□□□ 0.52
VPS28-206ENST00000526734 SFRP5Q5T4F7 317 aa18.3■□□□□ 0.52
VPS28-206ENST00000526734 ANKRD34AQ69YU3 496 aa18.3■□□□□ 0.52
VPS28-206ENST00000526734 CXorf67Q86X51 503 aaPredicted RBP18.3■□□□□ 0.52
VPS28-206ENST00000526734 DPP10Q8N608 796 aa18.3■□□□□ 0.52
VPS28-206ENST00000526734 BHLHE22Q8NFJ8 381 aaPredicted RBP18.3■□□□□ 0.52
VPS28-206ENST00000526734 KISS1RQ969F8 398 aaPredicted RBP18.3■□□□□ 0.52
VPS28-206ENST00000526734 MAL2Q969L2 176 aa18.3■□□□□ 0.52
VPS28-206ENST00000526734 ZC3HAV1LQ96H79 300 aaKnown RBP18.3■□□□□ 0.52
VPS28-206ENST00000526734 ZNF300Q96RE9 604 aaPredicted RBP18.3■□□□□ 0.52
VPS28-206ENST00000526734 EVA1AQ9H8M9 152 aa18.3■□□□□ 0.52
VPS28-206ENST00000526734 NGBQ9NPG2 151 aa18.3■□□□□ 0.52
VPS28-206ENST00000526734 SLAMF8Q9P0V8 285 aa18.3■□□□□ 0.52
VPS28-206ENST00000526734 PRORSD1PA6NEY8 169 aa18.29■□□□□ 0.52
VPS28-206ENST00000526734 ZNF716A6NP11 495 aa18.29■□□□□ 0.52
VPS28-206ENST00000526734 SIAH2O43255 324 aa18.29■□□□□ 0.52
VPS28-206ENST00000526734 GPIP06744 558 aa18.29■□□□□ 0.52
VPS28-206ENST00000526734 THBDP07204 575 aa18.29■□□□□ 0.52
VPS28-206ENST00000526734 GKN3PP0CG01 181 aa18.29■□□□□ 0.52
VPS28-206ENST00000526734 CCNA2P20248 432 aa18.29■□□□□ 0.52
VPS28-206ENST00000526734 FPR1P21462 350 aa18.29■□□□□ 0.52
VPS28-206ENST00000526734 IDUAP35475 653 aa18.29■□□□□ 0.52
VPS28-206ENST00000526734 H3F3AP84243 136 aa18.29■□□□□ 0.52
VPS28-206ENST00000526734 HSP90B2PQ58FF3 399 aa18.29■□□□□ 0.52
VPS28-206ENST00000526734 DHRS4L2Q6PKH6 230 aa18.29■□□□□ 0.52
VPS28-206ENST00000526734 PAQR6Q6TCH4 344 aa18.29■□□□□ 0.52
VPS28-206ENST00000526734 DHDDSQ86SQ9 333 aa18.29■□□□□ 0.52
VPS28-206ENST00000526734 ZNF100Q8IYN0 542 aa18.29■□□□□ 0.52
VPS28-206ENST00000526734 CLIP4Q8N3C7 705 aa18.29■□□□□ 0.52
VPS28-206ENST00000526734 CADM2Q8N3J6 435 aa18.29■□□□□ 0.52
VPS28-206ENST00000526734 THOC1Q96FV9 657 aaKnown RBP18.29■□□□□ 0.52
VPS28-206ENST00000526734 ZNF607Q96SK3 696 aa18.29■□□□□ 0.52
VPS28-206ENST00000526734 CPPED1Q9BRF8 314 aaPredicted RBP18.29■□□□□ 0.52
VPS28-206ENST00000526734 BEX4Q9NWD9 120 aaPredicted RBP18.29■□□□□ 0.52
VPS28-206ENST00000526734 NOSIPQ9Y314 301 aaKnown RBP18.29■□□□□ 0.52
VPS28-206ENST00000526734 A0A1W2PPR1 153 aa18.28■□□□□ 0.52
VPS28-206ENST00000526734 A8MVM7 634 aa18.28■□□□□ 0.52
VPS28-206ENST00000526734 ADAP00813 363 aa18.28■□□□□ 0.52
VPS28-206ENST00000526734 SLC6A2P23975 617 aa18.28■□□□□ 0.52
VPS28-206ENST00000526734 RBBP4Q09028 425 aa18.28■□□□□ 0.52
VPS28-206ENST00000526734 DEFB113Q30KQ7 82 aa18.28■□□□□ 0.52
VPS28-206ENST00000526734 DLEU7Q6UYE1 221 aa18.28■□□□□ 0.52
VPS28-206ENST00000526734 C20orf204Q6ZNR8 217 aa18.28■□□□□ 0.52
VPS28-206ENST00000526734 NFKBIDQ8NI38 313 aa18.28■□□□□ 0.52
VPS28-206ENST00000526734 HSD17B8Q92506 261 aa18.28■□□□□ 0.52
VPS28-206ENST00000526734 PIF1Q9H611 641 aa18.28■□□□□ 0.52
VPS28-206ENST00000526734 SLC9A8Q9Y2E8 581 aa18.28■□□□□ 0.52
VPS28-206ENST00000526734 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.27■□□□□ 0.52
VPS28-206ENST00000526734 ZNF814B7Z6K7 855 aa18.27■□□□□ 0.52
VPS28-206ENST00000526734 SERPINB7O75635 380 aa18.27■□□□□ 0.52
VPS28-206ENST00000526734 IMPDH2P12268 514 aa18.27■□□□□ 0.52
VPS28-206ENST00000526734 KLK2P20151 261 aa18.27■□□□□ 0.52
VPS28-206ENST00000526734 COX5AP20674 150 aa18.27■□□□□ 0.52
VPS28-206ENST00000526734 SCARB2Q14108 478 aa18.27■□□□□ 0.52
VPS28-206ENST00000526734 RUNDC3AQ59EK9 446 aa18.27■□□□□ 0.52
VPS28-206ENST00000526734 SERPINA11Q86U17 422 aa18.27■□□□□ 0.52
VPS28-206ENST00000526734 HIPK4Q8NE63 616 aa18.27■□□□□ 0.52
VPS28-206ENST00000526734 STK35Q8TDR2 534 aa18.27■□□□□ 0.52
VPS28-206ENST00000526734 APH1AQ96BI3 265 aa18.27■□□□□ 0.52
VPS28-206ENST00000526734 C3orf49Q96BT1 292 aa18.27■□□□□ 0.52
VPS28-206ENST00000526734 S100PBPQ96BU1 408 aa18.27■□□□□ 0.52
VPS28-206ENST00000526734 PIP5K1AQ99755 562 aa18.27■□□□□ 0.52
VPS28-206ENST00000526734 SF3B5Q9BWJ5 86 aaKnown RBP18.27■□□□□ 0.52
VPS28-206ENST00000526734 TAPBPLQ9BX59 468 aa18.27■□□□□ 0.52
VPS28-206ENST00000526734 TMEM120AQ9BXJ8 343 aa18.27■□□□□ 0.52
VPS28-206ENST00000526734 C12orf10Q9HB07 376 aa18.27■□□□□ 0.52
VPS28-206ENST00000526734 PARPBPQ9NWS1 579 aa18.27■□□□□ 0.52
VPS28-206ENST00000526734 ANGPT4Q9Y264 503 aa18.27■□□□□ 0.52
VPS28-206ENST00000526734 CHST2Q9Y4C5 530 aa18.27■□□□□ 0.52
VPS28-206ENST00000526734 F8P00451 2351 aa18.27■□□□□ 0.52
VPS28-206ENST00000526734 AKAP6Q13023 2319 aa18.26■□□□□ 0.51
VPS28-206ENST00000526734 LIPT2A6NK58 231 aa18.26■□□□□ 0.51
VPS28-206ENST00000526734 KLF4O43474 513 aa18.26■□□□□ 0.51
VPS28-206ENST00000526734 CD53P19397 219 aa18.26■□□□□ 0.51
VPS28-206ENST00000526734 LOXP28300 417 aaPredicted RBP18.26■□□□□ 0.51
VPS28-206ENST00000526734 FBXW9Q5XUX1 488 aa18.26■□□□□ 0.51
VPS28-206ENST00000526734 C5orf46Q6UWT4 87 aa18.26■□□□□ 0.51
VPS28-206ENST00000526734 C22orf34Q6ZV56 151 aa18.26■□□□□ 0.51
VPS28-206ENST00000526734 BHLHA15Q7RTS1 189 aaPredicted RBP18.26■□□□□ 0.51
VPS28-206ENST00000526734 ATG4DQ86TL0 474 aaPredicted RBP18.26■□□□□ 0.51
VPS28-206ENST00000526734 P2RY8Q86VZ1 359 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms